RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 WDYHV1Q96HA8 205 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 PDLIM5Q96HC4 596 aaKnown RBP4.16□□□□□ -1.74
CKS1B-207ENST00000477676 SENP5Q96HI0 755 aaPredicted RBP4.16□□□□□ -1.74
CKS1B-207ENST00000477676 MS4A14Q96JA4 679 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 SGCZQ96LD1 299 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 F2RL3Q96RI0 385 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 BAG1Q99933 345 aaPredicted RBP4.16□□□□□ -1.74
CKS1B-207ENST00000477676 AIF1LQ9BQI0 150 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 CCDC77Q9BR77 488 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 PIGQQ9BRB3 760 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 TMEM79Q9BSE2 394 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 SORBS1Q9BX66 1292 aaKnown RBP4.16□□□□□ -1.74
CKS1B-207ENST00000477676 NPLQ9BXD5 320 aaPredicted RBP4.16□□□□□ -1.74
CKS1B-207ENST00000477676 UBQLN3Q9H347 655 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 LDAHQ9H6V9 325 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 ACKR4Q9NPB9 350 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 HOMER3Q9NSC5 361 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 SACM1LQ9NTJ5 587 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 TAS2R13Q9NYV9 303 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 B4GALT7Q9UBV7 327 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 GUCA1BQ9UMX6 200 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 SLC6A5Q9Y345 797 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 PCDHGB3Q9Y5G1 929 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 PSAT1Q9Y617 370 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 MAD1L1Q9Y6D9 718 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 CLCA3PQ9Y6N3 262 aa4.16□□□□□ -1.74
CKS1B-207ENST00000477676 PRKDCP78527 4128 aaKnown RBP4.16□□□□□ -1.74
CKS1B-207ENST00000477676 DYSFO75923 2080 aa4.15□□□□□ -1.74
CKS1B-207ENST00000477676 MEGF8Q7Z7M0 2845 aa4.15□□□□□ -1.74
CKS1B-207ENST00000477676 MAGEB16A2A368 324 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 MBD3L4A6NDZ8 208 aaPredicted RBP4.15□□□□□ -1.75
CKS1B-207ENST00000477676 MBD3L3A6NE82 208 aaPredicted RBP4.15□□□□□ -1.75
CKS1B-207ENST00000477676 TUBAL3A6NHL2 446 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 MBD3L5A6NJ08 208 aaPredicted RBP4.15□□□□□ -1.75
CKS1B-207ENST00000477676 DEFB108AA8MXU0 73 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 SH3BGRLO75368 114 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 PIAS1O75925 651 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 IPO7O95373 1038 aaKnown RBP4.15□□□□□ -1.75
CKS1B-207ENST00000477676 P04436 131 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 IFNA16P05015 189 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 GABRA1P14867 456 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 ATP5A1P25705 553 aaKnown RBP4.15□□□□□ -1.75
CKS1B-207ENST00000477676 IVDP26440 423 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 RPL21P46778 160 aaKnown RBP4.15□□□□□ -1.75
CKS1B-207ENST00000477676 CDK9P50750 372 aaKnown RBP4.15□□□□□ -1.75
CKS1B-207ENST00000477676 NAGLUP54802 743 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 HNRNPH2P55795 449 aaKnown RBP4.15□□□□□ -1.75
CKS1B-207ENST00000477676 FBXW4P57775 412 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 TAS2R39P59534 338 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 STXBP1P61764 594 aaKnown RBP4.15□□□□□ -1.75
CKS1B-207ENST00000477676 RPS7P62081 194 aaKnown RBP4.15□□□□□ -1.75
CKS1B-207ENST00000477676 SKP1P63208 163 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 ACAP2Q15057 778 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 PCBP2Q15366 365 aaKnown RBP eCLIP4.15□□□□□ -1.75
CKS1B-207ENST00000477676 TSNQ15631 228 aaKnown RBP4.15□□□□□ -1.75
CKS1B-207ENST00000477676 NTRK2Q16620 822 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 EIPR1Q53HC9 387 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 Q5PR19 223 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 RNASEH2BQ5TBB1 312 aaKnown RBP4.15□□□□□ -1.75
CKS1B-207ENST00000477676 SLC22A10Q63ZE4 541 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 NSUN5P2Q63ZY6 315 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 LRRC8EQ6NSJ5 796 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 NIPAL1Q6NVV3 410 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 OPN5Q6U736 354 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 TMIGD1Q6UXZ0 262 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 GAS2L3Q86XJ1 694 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 LMNTD2Q8IXW0 634 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 MIER2Q8N344 545 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 FBXW8Q8N3Y1 598 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 RASGEF1CQ8N431 466 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 ZNF441Q8N8Z8 693 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 ACOT4Q8N9L9 421 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 SPATA3Q8NHX4 192 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 MBD3L2Q8NHZ7 208 aaPredicted RBP4.15□□□□□ -1.75
CKS1B-207ENST00000477676 TBC1D15Q8TC07 691 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 SLC44A1Q8WWI5 657 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 DAZLQ92904 295 aaKnown RBP4.15□□□□□ -1.75
CKS1B-207ENST00000477676 RHBDF1Q96CC6 855 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 SPACA9Q96E40 222 aaPredicted RBP4.15□□□□□ -1.75
CKS1B-207ENST00000477676 MARK4Q96L34 752 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 SERINC2Q96SA4 455 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 MS4A8Q9BY19 250 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 UGT2B28Q9BY64 529 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 QRSL1Q9H0R6 528 aaKnown RBP4.15□□□□□ -1.75
CKS1B-207ENST00000477676 GSTO2Q9H4Y5 243 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 EXO5Q9H790 373 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 NT5DC2Q9H857 520 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 XAB2Q9HCS7 855 aaKnown RBP4.15□□□□□ -1.75
CKS1B-207ENST00000477676 BEX4Q9NWD9 120 aaPredicted RBP4.15□□□□□ -1.75
CKS1B-207ENST00000477676 ZNF629Q9UEG4 869 aaPredicted RBP4.15□□□□□ -1.75
CKS1B-207ENST00000477676 DTX4Q9Y2E6 619 aa4.15□□□□□ -1.75
CKS1B-207ENST00000477676 C15orf38-AP3S2A0A0A6YYH1 394 aa4.14□□□□□ -1.75
CKS1B-207ENST00000477676 URADA6NGE7 173 aa4.14□□□□□ -1.75
CKS1B-207ENST00000477676 CD8B2A6NJW9 211 aa4.14□□□□□ -1.75
CKS1B-207ENST00000477676 C17orf51A8MQB3 221 aa4.14□□□□□ -1.75
CKS1B-207ENST00000477676 EEF1E1-BLOC1S5C9J1V9 151 aa4.14□□□□□ -1.75
CKS1B-207ENST00000477676 SAP18O00422 153 aaKnown RBP4.14□□□□□ -1.75
CKS1B-207ENST00000477676 MGST3O14880 152 aa4.14□□□□□ -1.75
CKS1B-207ENST00000477676 TP73O15350 636 aa4.14□□□□□ -1.75
CKS1B-207ENST00000477676 EEF1E1O43324 174 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms