RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	GEM	P55040	296 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	MAZ	P56270	477 aa	Known RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	TAS2R39	P59534	338 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	CXADR	P78310	365 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	PLIN5	Q00G26	463 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	DEFA5	Q01523	94 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	SLC6A3	Q01959	620 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	SLC3A1	Q07837	685 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	COL9A2	Q14055	689 aa	Predicted RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	PPA1	Q15181	289 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	HMGN3	Q15651	99 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	MPPED2	Q15777	294 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	SGCA	Q16586	387 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	MAPKAPK3	Q16644	382 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	SYTL3	Q4VX76	610 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	XKR9	Q5GH70	373 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	XKR3	Q5GH77	459 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	SLC25A30	Q5SVS4	291 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	LRIF1	Q5T3J3	769 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	FAM102B	Q5T8I3	360 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	ATPAF1	Q5TC12	328 aa	Predicted RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	NCBP2-AS2	Q69YL0	99 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	SLC39A4	Q6P5W5	647 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	CD200R1L	Q6Q8B3	271 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	LCLAT1	Q6UWP7	414 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	ALKAL1	Q6UXT8	129 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	LINGO4	Q6UY18	593 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	CYHR1	Q6ZMK1	362 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	C17orf107	Q6ZR85	190 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	ABHD13	Q7L211	337 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	DPH6	Q7L8W6	267 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	TRMT11	Q7Z4G4	463 aa	Known RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	TAC4	Q86UU9	113 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	NT5DC4	Q86YG4	428 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	SLC41A1	Q8IVJ1	513 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	SLC35F3	Q8IY50	421 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	CFAP206	Q8IYR0	622 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZNF567	Q8N184	647 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	FTMT	Q8N4E7	242 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	NANOGP1	Q8N7R0	232 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	C7orf31	Q8N865	590 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	POMGNT2	Q8NAT1	580 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	KLHDC9	Q8NEP7	349 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	ATP6V1C2	Q8NEY4	427 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	OR11H7	Q8NGC8	314 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	OR52K1	Q8NGK4	314 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	OR6K3	Q8NGY3	331 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	RPLP0P6	Q8NHW5	317 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZNF461	Q8TAF7	563 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	STAG3L4	Q8TBR4	150 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	PROKR1	Q8TCW9	393 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	POF1B	Q8WVV4	589 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	EVPL	Q92817	2033 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	TRMT61A	Q96FX7	289 aa	Known RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	TMEM176A	Q96HP8	235 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZC3H10	Q96K80	434 aa	Known RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	OR2A7	Q96R45	310 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	OR14A2	Q96R54	314 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	OR4K3	Q96R72	315 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	PEBP4	Q96S96	227 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	PFDN5	Q99471	154 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	TSNAX	Q99598	290 aa	Known RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	SSX3	Q99909	188 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	TEX101	Q9BY14	249 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	GPR61	Q9BZJ8	451 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	SEMA4C	Q9C0C4	833 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	TINAGL1	Q9GZM7	467 aa	Predicted RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	ENKD1	Q9H0I2	346 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	METTL9	Q9H1A3	318 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	MTG2	Q9H4K7	406 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	EVA1A	Q9H8M9	152 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	CACYBP	Q9HB71	228 aa	Known RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	HHATL	Q9HCP6	504 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	GALNT9	Q9HCQ5	603 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	MYOZ1	Q9NP98	299 aa	Predicted RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	FZD3	Q9NPG1	666 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	PRMT8	Q9NR22	394 aa	Predicted RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	SNTG1	Q9NSN8	517 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	PRMT7	Q9NVM4	692 aa	Predicted RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	THUMPD1	Q9NXG2	353 aa	Known RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	KLHL8	Q9P2G9	620 aa	Predicted RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZNF624	Q9P2J8	865 aa	Predicted RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	PLEKHB1	Q9UF11	243 aa	Predicted RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	NDOR1	Q9UHB4	597 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	CYTH4	Q9UIA0	394 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	LAMP5	Q9UJQ1	280 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	FBXL3	Q9UKT7	428 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	CBLC	Q9ULV8	474 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	NDRG2	Q9UN36	371 aa	Known RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	DUSP12	Q9UNI6	340 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	PPIE	Q9UNP9	301 aa	Known RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	ERVK-19	Q9WJR5	959 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	TP53TG5	Q9Y2B4	290 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	KCNIP3	Q9Y2W7	256 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	POLR3H	Q9Y535	204 aa	Predicted RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	CLCA3P	Q9Y6N3	262 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	SCN10A	Q9Y5Y9	1956 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	ARID2	Q68CP9	1835 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520		A0A0U1RQF3	1178 aa		4.41	□□□□□ -1.7

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