RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 LGSNQ5TDP6 509 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 FRG2Q64ET8 278 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 GOLGA7Q7Z5G4 137 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 CMC1Q7Z7K0 106 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 P3H2Q8IVL5 708 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 ZNF441Q8N8Z8 693 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 WDYHV1Q96HA8 205 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 C18orf12Q96KH6 178 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 GNRHR2Q96P88 292 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 FRG2BQ96QU4 278 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 SLC39A3Q9BRY0 314 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 NTMT1Q9BV86 223 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 SORBS1Q9BX66 1292 aaKnown RBP6.6□□□□□ -1.35
BRCA1-214ENST00000477152 UGT2B28Q9BY64 529 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 UBQLN3Q9H347 655 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 BRF2Q9HAW0 419 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 PROK2Q9HC23 129 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 ZIM2Q9NZV7 527 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 EXO1Q9UQ84 846 aaKnown RBP6.6□□□□□ -1.35
BRCA1-214ENST00000477152 MRPS18CQ9Y3D5 142 aaKnown RBP6.6□□□□□ -1.35
BRCA1-214ENST00000477152 EXPH5Q8NEV8 1989 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 SH3D21A4FU49 640 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 HRKO00198 91 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 AKAP10O43572 662 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 TMPRSS11DO60235 418 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 EEDO75530 441 aaKnown RBP6.6□□□□□ -1.35
BRCA1-214ENST00000477152 ERAL1O75616 437 aaKnown RBP6.6□□□□□ -1.35
BRCA1-214ENST00000477152 ALDOAP04075 364 aaKnown RBP6.6□□□□□ -1.35
BRCA1-214ENST00000477152 ATP1B1P05026 303 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 C2P06681 752 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 KLK1P06870 262 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 ABCB1P08183 1280 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-214ENST00000477152 INHBAP08476 426 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 HSD3B1P14060 373 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 DRD5P21918 477 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 PTPN6P29350 595 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 IL12BP29460 328 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 CASQ1P31415 396 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 PPICP45877 212 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 GP2P55259 537 aaKnown RBP6.6□□□□□ -1.35
BRCA1-214ENST00000477152 CKAP4Q07065 602 aaKnown RBP6.6□□□□□ -1.35
BRCA1-214ENST00000477152 GGTA1PQ4G0N0 100 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 GRAMD2AQ8IUY3 354 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 ZNF615Q8N8J6 731 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 FAM83FQ8NEG4 500 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-214ENST00000477152 SPATA4Q8NEY3 305 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 WDR20Q8TBZ3 569 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 KCTD4Q8WVF5 259 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 ADIPOR1Q96A54 375 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 OMA1Q96E52 524 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 KIRREL1Q96J84 757 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 COL21A1Q96P44 957 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 PIP5K1AQ99755 562 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 BDH2Q9BUT1 245 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 VPS11Q9H270 941 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 NOL11Q9H8H0 719 aaKnown RBP6.6□□□□□ -1.35
BRCA1-214ENST00000477152 SENP1Q9P0U3 644 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 DKKL1Q9UK85 242 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 SLC6A5Q9Y345 797 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 HIVEP1P15822 2718 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 OR6C70A6NIJ9 312 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 SMPD2O60906 423 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 ULK1O75385 1050 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 REM1O75628 298 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 LRATO95237 230 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 KRT6AP02538 564 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 KRT6BP04259 564 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 PEPDP12955 493 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 TAC1P20366 129 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 GPX3P22352 226 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 SRD5A2P31213 254 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 KRT6CP48668 564 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 PSMD4P55036 377 aaKnown RBP6.59□□□□□ -1.35
BRCA1-214ENST00000477152 SESN3P58005 492 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 ERVFRD-1P60508 538 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 ADAM8P78325 824 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 NKX6-1P78426 367 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-214ENST00000477152 BCL2A1Q16548 175 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 SLC48A1Q6P1K1 146 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 DGAT2L6Q6ZPD8 337 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 SEM1Q6ZVN7 128 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 PLCZ1Q86YW0 608 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 LRRC75A-AS1Q8N1F1 130 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 METTL4Q8N3J2 472 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 SELENOMQ8WWX9 145 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 NRGNQ92686 78 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 KLHL29Q96CT2 875 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 SFXN2Q96NB2 322 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 OR2B2Q9GZK3 357 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 IQCGQ9H095 443 aaKnown RBP6.59□□□□□ -1.35
BRCA1-214ENST00000477152 STMN4Q9H169 189 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-214ENST00000477152 PTGES2Q9H7Z7 377 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 GRPEL1Q9HAV7 217 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 ELOVL5Q9NYP7 299 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 TAS2R10Q9NYW0 307 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 JKAMPQ9P055 326 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 KLHL14Q9P2G3 628 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 PACSIN3Q9UKS6 424 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 SLC12A4Q9UP95 1085 aa6.59□□□□□ -1.35
BRCA1-214ENST00000477152 DLGAP4Q9Y2H0 992 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms