RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 Q9N2J8 555 aa11.34□□□□□ -0.59
APTX-220ENST00000476858 NPHS2Q9NP85 383 aa11.34□□□□□ -0.59
APTX-220ENST00000476858 SLC52A3Q9NQ40 469 aa11.34□□□□□ -0.59
APTX-220ENST00000476858 TCF7L2Q9NQB0 619 aa11.34□□□□□ -0.59
APTX-220ENST00000476858 SDR39U1Q9NRG7 319 aaPredicted RBP11.34□□□□□ -0.59
APTX-220ENST00000476858 PNPLA3Q9NST1 481 aa11.34□□□□□ -0.59
APTX-220ENST00000476858 ATAD3AQ9NVI7 634 aa11.34□□□□□ -0.59
APTX-220ENST00000476858 DCTN4Q9UJW0 460 aa11.34□□□□□ -0.59
APTX-220ENST00000476858 SLC5A6Q9Y289 635 aa11.34□□□□□ -0.59
APTX-220ENST00000476858 RP1L1Q8IWN7 2480 aaPredicted RBP11.34□□□□□ -0.59
APTX-220ENST00000476858 HECTD1Q9ULT8 2610 aa11.34□□□□□ -0.59
APTX-220ENST00000476858 MED12Q93074 2177 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 RNF103-CHMP3A0A140T963 221 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 PRSS51A0A1B0GVH4 220 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 WIPF3A6NGB9 483 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 CAPN14A8MX76 684 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 SHISA8B8ZZ34 492 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 CCL21O00585 134 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 CLDN1O95832 211 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 PGRP06401 933 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 TPOP07202 933 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 ALOX5P09917 674 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 ABOP16442 354 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 COL8A1P27658 744 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 EVI2BP34910 448 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 PTGS2P35354 604 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 MASP1P48740 699 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 SLC10A1Q14973 349 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 CD226Q15762 336 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 NDUFAF6Q330K2 333 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 TIGD2Q4W5G0 525 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 COX20Q5RI15 118 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.33□□□□□ -0.6
APTX-220ENST00000476858 RTL6Q6ICC9 239 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 CDC73Q6P1J9 531 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 TMEM81Q6P7N7 255 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 HOMEZQ8IX15 550 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 KIRREL3Q8IZU9 778 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 FAM57AQ8TBR7 257 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 PNPT1Q8TCS8 783 aaKnown RBP11.33□□□□□ -0.6
APTX-220ENST00000476858 SFXN5Q8TD22 340 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 RAB8BQ92930 207 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 CHMP6Q96FZ7 201 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 AURKBQ96GD4 344 aaPredicted RBP11.33□□□□□ -0.6
APTX-220ENST00000476858 CCDC120Q96HB5 630 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 CCDC115Q96NT0 180 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 PSMG3-AS1Q96PY0 264 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 OR52E6Q96RD3 313 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 PRPF18Q99633 342 aaKnown RBP11.33□□□□□ -0.6
APTX-220ENST00000476858 FGFR1OP2Q9NVK5 253 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 MED11Q9P086 117 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 KCNE5Q9UJ90 142 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 BOKQ9UMX3 212 aaPredicted RBP11.33□□□□□ -0.6
APTX-220ENST00000476858 WIF1Q9Y5W5 379 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 KIAA1549Q9HCM3 1950 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 ASH1LQ9NR48 2969 aaKnown RBP11.33□□□□□ -0.6
APTX-220ENST00000476858 PCNX3Q9H6A9 2034 aa11.33□□□□□ -0.6
APTX-220ENST00000476858 FREM3P0C091 2139 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 TRGV5A0A0B4J1U4 118 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 A0A1B0GVC2 190 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 ACOT7O00154 380 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 SLC22A3O75751 556 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 TRAPPC6AO75865 159 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 SNX4O95219 450 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 OXSR1O95747 527 aaPredicted RBP11.32□□□□□ -0.6
APTX-220ENST00000476858 IDO1P14902 403 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 CLNS1AP54105 237 aaKnown RBP11.32□□□□□ -0.6
APTX-220ENST00000476858 PRR5P85299 388 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 ZNHIT3Q15649 155 aaPredicted RBP11.32□□□□□ -0.6
APTX-220ENST00000476858 DECR1Q16698 335 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 SAXO2Q658L1 398 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 SLC30A6Q6NXT4 461 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 TNFAIP8L2Q6P589 184 aaPredicted RBP11.32□□□□□ -0.6
APTX-220ENST00000476858 SLC2A7Q6PXP3 512 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 PACS2Q86VP3 889 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 COX18Q8N8Q8 333 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 FAM83FQ8NEG4 500 aaPredicted RBP11.32□□□□□ -0.6
APTX-220ENST00000476858 OR56A1Q8NGH5 318 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 OR5M1Q8NGP8 315 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 OR1J4Q8NGS1 313 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 GOT1L1Q8NHS2 421 aaPredicted RBP11.32□□□□□ -0.6
APTX-220ENST00000476858 SSC4DQ8WTU2 575 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 TMCO6Q96DC7 493 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 ACTRT3Q9BYD9 372 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 OR51I1Q9H343 314 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 DSN1Q9H410 356 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 PIGUQ9H490 435 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 ZNF385DQ9H6B1 395 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 SLAMF8Q9P0V8 285 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 DOPEY2Q9Y3R5 2298 aa11.32□□□□□ -0.6
APTX-220ENST00000476858 CCDC154A6NI56 674 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 POLR3GO15318 223 aaPredicted RBP11.31□□□□□ -0.6
APTX-220ENST00000476858 ZIC3O60481 467 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 FCMRO60667 390 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 BCAS1O75363 584 aaPredicted RBP11.31□□□□□ -0.6
APTX-220ENST00000476858 TGDSO95455 350 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 HPNP05981 417 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 OR12D1P0DN82 309 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 HOXB9P17482 250 aaPredicted RBP11.31□□□□□ -0.6
APTX-220ENST00000476858 CAPN3P20807 821 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms