RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 TDRD15B5MCY1 1934 aaKnown RBP4.69□□□□□ -1.66
CCDC39-204ENST00000476379 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 OR6C74A6NCV1 312 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 TNFSF12O43508 249 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 TMPRSS11DO60235 418 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 OR6A2O95222 327 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 CTSLP07711 333 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 RETP07949 1114 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 EIF2DP41214 584 aaKnown RBP4.69□□□□□ -1.66
CCDC39-204ENST00000476379 MTNR1AP48039 350 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 HNMTP50135 292 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 CCR8P51685 355 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 MAZP56270 477 aaKnown RBP4.69□□□□□ -1.66
CCDC39-204ENST00000476379 KCNJ10P78508 379 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 HTRA4P83105 476 aaPredicted RBP4.69□□□□□ -1.66
CCDC39-204ENST00000476379 CRYZQ08257 329 aaKnown RBP4.69□□□□□ -1.66
CCDC39-204ENST00000476379 SCRN3Q0VDG4 424 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 FAPQ12884 760 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 TUBA3CQ13748 450 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 CCDC58Q4VC31 144 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 YOD1Q5VVQ6 348 aaPredicted RBP4.69□□□□□ -1.66
CCDC39-204ENST00000476379 PGBD2Q6P3X8 592 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 USP53Q70EK8 1073 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 TAF8Q7Z7C8 310 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 OOSP2Q86WS3 158 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 ALDH16A1Q8IZ83 802 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 BATF2Q8N1L9 274 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 SLC16A11Q8NCK7 471 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 DNAAF1Q8NEP3 725 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 NUP43Q8NFH3 380 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 OR5H6Q8NGV6 325 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 C1orf216Q8TAB5 229 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 LRRC20Q8TCA0 184 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF431Q8TF32 576 aaPredicted RBP4.69□□□□□ -1.66
CCDC39-204ENST00000476379 CASTOR1Q8WTX7 329 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 TNFAIP8L1Q8WVP5 186 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 DEDD2Q8WXF8 326 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 CDS1Q92903 461 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 TRMT61AQ96FX7 289 aaKnown RBP4.69□□□□□ -1.66
CCDC39-204ENST00000476379 GUCD1Q96NT3 240 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 TSSK2Q96PF2 358 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 TEFMQ96QE5 360 aaKnown RBP4.69□□□□□ -1.66
CCDC39-204ENST00000476379 ZSCAN5AQ9BUG6 496 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 ACTR6Q9GZN1 396 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 POPDC3Q9HBV1 291 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 DMRT3Q9NQL9 472 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 PNO1Q9NRX1 252 aaKnown RBP4.69□□□□□ -1.66
CCDC39-204ENST00000476379 CENPMQ9NSP4 180 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF226Q9NYT6 803 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 HCN2Q9UL51 889 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 MAN2B2Q9Y2E5 1009 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 ENPP4Q9Y6X5 453 aa4.69□□□□□ -1.66
CCDC39-204ENST00000476379 TECTAO75443 2155 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 IGLV3-10A0A075B6K4 115 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 OR2A25A4D2G3 310 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 GRXCR2A6NFK2 248 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 GTPBP1O00178 669 aaKnown RBP4.68□□□□□ -1.66
CCDC39-204ENST00000476379 ARNTLO00327 626 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 GABARAPO95166 117 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 NPPBP16860 134 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 EDNRAP25101 427 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 GIFP27352 417 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 AKR1C2P52895 323 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 DEFA5Q01523 94 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 AKR1C1Q04828 323 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 LGALS3BPQ08380 585 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF805Q5CZA5 627 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 KDM4DQ6B0I6 523 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 PLAG1Q6DJT9 500 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 LIN54Q6MZP7 749 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 SLC27A4Q6P1M0 643 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 NXPE4Q6UWF7 544 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF627Q7L945 461 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 TOMM5Q8N4H5 51 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF655Q8N720 491 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-204ENST00000476379 ANKK1Q8NFD2 765 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 OR52N2Q8NGI0 321 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 OR52E2Q8NGJ4 325 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 OR4C6Q8NH72 309 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 TSEN15Q8WW01 171 aaKnown RBP4.68□□□□□ -1.66
CCDC39-204ENST00000476379 TMCO6Q96DC7 493 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 ERMAPQ96PL5 475 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-204ENST00000476379 PDCD1LG2Q9BQ51 273 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 ORAI3Q9BRQ5 295 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 ULBP3Q9BZM4 244 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 B3GNT4Q9C0J1 378 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 OR8D2Q9GZM6 311 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 RASD1Q9Y272 281 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 ATG4BQ9Y4P1 393 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 PCYT1BQ9Y5K3 369 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-204ENST00000476379 A0A0G2JMP0 313 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 A0A0X1KG70 313 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 CIB4A0PJX0 185 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 PLPP1O14494 284 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 CDC40O60508 579 aaKnown RBP eCLIP4.68□□□□□ -1.66
CCDC39-204ENST00000476379 SULT1C4O75897 302 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 F11P03951 625 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 SPINK2P20155 84 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 MMP11P24347 488 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 MAGEA2P43356 314 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms