RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 NEURL3Q96EH8 262 aa14.4□□□□□ -0.1
CPSF3-203ENST00000475482 AURKBQ96GD4 344 aaPredicted RBP14.4□□□□□ -0.1
CPSF3-203ENST00000475482 RSRC1Q96IZ7 334 aaKnown RBP14.4□□□□□ -0.1
CPSF3-203ENST00000475482 ZNF681Q96N22 645 aa14.4□□□□□ -0.1
CPSF3-203ENST00000475482 RASL10BQ96S79 203 aa14.4□□□□□ -0.1
CPSF3-203ENST00000475482 PELOQ9BRX2 385 aaKnown RBP14.4□□□□□ -0.1
CPSF3-203ENST00000475482 OR8D2Q9GZM6 311 aa14.4□□□□□ -0.1
CPSF3-203ENST00000475482 CXorf36Q9H7Y0 433 aa14.4□□□□□ -0.1
CPSF3-203ENST00000475482 NPIPA5E9PKD4 350 aa14.39□□□□□ -0.11
CPSF3-203ENST00000475482 KLRC4-KLRK1H3BQV0 150 aa14.39□□□□□ -0.11
CPSF3-203ENST00000475482 ZNF354AO60765 605 aaPredicted RBP14.39□□□□□ -0.11
CPSF3-203ENST00000475482 PSMG1O95456 288 aa14.39□□□□□ -0.11
CPSF3-203ENST00000475482 CPMP14384 443 aa14.39□□□□□ -0.11
CPSF3-203ENST00000475482 HOXB6P17509 224 aaKnown RBP14.39□□□□□ -0.11
CPSF3-203ENST00000475482 COL8A1P27658 744 aa14.39□□□□□ -0.11
CPSF3-203ENST00000475482 GALNSP34059 522 aa14.39□□□□□ -0.11
CPSF3-203ENST00000475482 MSX2P35548 267 aaPredicted RBP14.39□□□□□ -0.11
CPSF3-203ENST00000475482 FEN1P39748 380 aaKnown RBP14.39□□□□□ -0.11
CPSF3-203ENST00000475482 CRATP43155 626 aa14.39□□□□□ -0.11
CPSF3-203ENST00000475482 MS4A2Q01362 244 aa14.39□□□□□ -0.11
CPSF3-203ENST00000475482 FOLH1Q04609 750 aa14.39□□□□□ -0.11
CPSF3-203ENST00000475482 RBPJQ06330 500 aa14.39□□□□□ -0.11
CPSF3-203ENST00000475482 RBBP4Q09028 425 aa14.39□□□□□ -0.11
CPSF3-203ENST00000475482 GAB1Q13480 694 aa14.39□□□□□ -0.11
CPSF3-203ENST00000475482 RGNQ15493 299 aa14.39□□□□□ -0.11
CPSF3-203ENST00000475482 GLYATQ6IB77 296 aa14.39□□□□□ -0.11
CPSF3-203ENST00000475482 DGAT2L6Q6ZPD8 337 aa14.39□□□□□ -0.11
CPSF3-203ENST00000475482 SPATA24Q86W54 205 aa14.39□□□□□ -0.11
CPSF3-203ENST00000475482 SPPL2CQ8IUH8 684 aa14.39□□□□□ -0.11
CPSF3-203ENST00000475482 OR4N5Q8IXE1 308 aa14.39□□□□□ -0.11
CPSF3-203ENST00000475482 ST13P4Q8IZP2 240 aaPredicted RBP14.39□□□□□ -0.11
CPSF3-203ENST00000475482 NUBPLQ8TB37 319 aa14.39□□□□□ -0.11
CPSF3-203ENST00000475482 ITLN2Q8WWU7 325 aaPredicted RBP14.39□□□□□ -0.11
CPSF3-203ENST00000475482 SENP5Q96HI0 755 aaPredicted RBP14.39□□□□□ -0.11
CPSF3-203ENST00000475482 TRIM8Q9BZR9 551 aa14.39□□□□□ -0.11
CPSF3-203ENST00000475482 PCDHAC1Q9H158 963 aa14.39□□□□□ -0.11
CPSF3-203ENST00000475482 LIN28AQ9H9Z2 209 aaKnown RBP14.39□□□□□ -0.11
CPSF3-203ENST00000475482 DEPPQ9NTK1 212 aa14.39□□□□□ -0.11
CPSF3-203ENST00000475482 ZCCHC3Q9NUD5 404 aaKnown RBP14.39□□□□□ -0.11
CPSF3-203ENST00000475482 NPIPA1Q9UND3 350 aa14.39□□□□□ -0.11
CPSF3-203ENST00000475482 CACNA1CQ13936 2221 aa14.39□□□□□ -0.11
CPSF3-203ENST00000475482 TRGV8A0A0C4DH27 118 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 TMEM247A6NEH6 219 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 WASHC1A8K0Z3 465 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 ARPC2O15144 300 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 EMC8O43402 210 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 PEX1O43933 1283 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 ATP1B1P05026 303 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 UMPSP11172 480 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 ZNF24P17028 368 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 TNNI3P19429 210 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 GGT1P19440 569 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 DCTP40126 519 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 SOX3P41225 446 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 PRIM2P49643 509 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 MEOX1P50221 254 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 CCNIQ14094 377 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 VEZF1Q14119 521 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 SNCBQ16143 134 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 C3AR1Q16581 482 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 SAXO2Q658L1 398 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 C6orf120Q7Z4R8 191 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 FGD2Q7Z6J4 655 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 GHDCQ8N2G8 530 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 C11orf65Q8NCR3 313 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 PSD4Q8NDX1 1056 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 HIPK4Q8NE63 616 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 OR52E4Q8NGH9 312 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 OR5L2Q8NGL0 311 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 UCN3Q969E3 161 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 RBM18Q96H35 190 aaKnown RBP14.38□□□□□ -0.11
CPSF3-203ENST00000475482 CCDC120Q96HB5 630 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 FBXL20Q96IG2 436 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 NSMCE2Q96MF7 247 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 TSPAN10Q9H1Z9 355 aaPredicted RBP14.38□□□□□ -0.11
CPSF3-203ENST00000475482 IKZF5Q9H5V7 419 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 PIF1Q9H611 641 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 GORASP2Q9H8Y8 452 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 TIMMDC1Q9NPL8 285 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 PLSCR2Q9NRY7 297 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 SIRT3Q9NTG7 399 aaPredicted RBP14.38□□□□□ -0.11
CPSF3-203ENST00000475482 RYDENQ9NUL5 291 aaKnown RBP14.38□□□□□ -0.11
CPSF3-203ENST00000475482 EGFL7Q9UHF1 273 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 FAF1Q9UNN5 650 aaPredicted RBP14.38□□□□□ -0.11
CPSF3-203ENST00000475482 ERVK-11Q9UQG0 969 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 PKDREJQ9NTG1 2253 aa14.38□□□□□ -0.11
CPSF3-203ENST00000475482 A8MVJ9 347 aa14.37□□□□□ -0.11
CPSF3-203ENST00000475482 WWP2O00308 870 aa14.37□□□□□ -0.11
CPSF3-203ENST00000475482 CCL21O00585 134 aa14.37□□□□□ -0.11
CPSF3-203ENST00000475482 OR10H2O60403 315 aa14.37□□□□□ -0.11
CPSF3-203ENST00000475482 SOX30O94993 753 aa14.37□□□□□ -0.11
CPSF3-203ENST00000475482 OR6B1O95007 311 aa14.37□□□□□ -0.11
CPSF3-203ENST00000475482 C8BP07358 591 aa14.37□□□□□ -0.11
CPSF3-203ENST00000475482 SLC35E2P0CK97 266 aa14.37□□□□□ -0.11
CPSF3-203ENST00000475482 PSMA4P25789 261 aaKnown RBP14.37□□□□□ -0.11
CPSF3-203ENST00000475482 CDK9P50750 372 aaKnown RBP14.37□□□□□ -0.11
CPSF3-203ENST00000475482 TP53BP2Q13625 1128 aa14.37□□□□□ -0.11
CPSF3-203ENST00000475482 ZNF630Q2M218 657 aaPredicted RBP14.37□□□□□ -0.11
CPSF3-203ENST00000475482 VMACQ2NL98 169 aa14.37□□□□□ -0.11
CPSF3-203ENST00000475482 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms