RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 TRAF3Q13114 568 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 HEPACAMQ14CZ8 416 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 DECR1Q16698 335 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 CYP27C1Q4G0S4 372 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 MROH9Q5TGP6 573 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 GTF2IRD2BQ6EKJ0 949 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 NPSR1Q6W5P4 371 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 GTF2IRD2Q86UP8 949 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 EXOC3L1Q86VI1 746 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 STEAP2Q8NFT2 490 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 OR9A2Q8NGT5 310 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 FBF1Q8TES7 1133 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 ZBED6CLQ96FA7 236 aaPredicted RBP11.29□□□□□ -0.6
SKA3-206ENST00000475251 ERP44Q9BS26 406 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 HDHD5Q9BXW7 423 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 DPH5Q9H2P9 285 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 ESRP2Q9H6T0 727 aaKnown RBP11.29□□□□□ -0.6
SKA3-206ENST00000475251 LRTM1Q9HBL6 345 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 FAM120CQ9NX05 1096 aaKnown RBP11.29□□□□□ -0.6
SKA3-206ENST00000475251 RNF14Q9UBS8 474 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 PCTPQ9UKL6 214 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 SAR1BQ9Y6B6 198 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 FAM187AA6NFU0 413 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 B4DXG7 233 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 EIF1AYO14602 144 aaKnown RBP11.28□□□□□ -0.6
SKA3-206ENST00000475251 FADS1O60427 444 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 DLX3O60479 287 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 SMIM24O75264 130 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 SLITRK5O94991 958 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 SYNGR4O95473 234 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 PDYNP01213 254 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 CD3EP07766 207 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 FAM157CP0CG43 387 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 HSD3B1P14060 373 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 ZNF17P17021 662 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 HSD3B2P26439 372 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 TYK2P29597 1187 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 SERPINB8P50452 374 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 CAV1Q03135 178 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 C17orf67Q0P5P2 114 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 ZNF155Q12901 538 aaPredicted RBP11.28□□□□□ -0.6
SKA3-206ENST00000475251 STX5Q13190 355 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 TECRLQ5HYJ1 363 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 FAM180BQ6P0A1 224 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 THSD4Q6ZMP0 1018 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 WDR75Q8IWA0 830 aaKnown RBP11.28□□□□□ -0.6
SKA3-206ENST00000475251 FAM9CQ8IZT9 166 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 C1orf52Q8N6N3 182 aaKnown RBP11.28□□□□□ -0.6
SKA3-206ENST00000475251 OR4F6Q8NGB9 312 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 OR5M1Q8NGP8 315 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 KAT2AQ92830 837 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 EXOSC8Q96B26 276 aaKnown RBP11.28□□□□□ -0.6
SKA3-206ENST00000475251 PHF21BQ96EK2 531 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 HS6ST2Q96MM7 605 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 USB1Q9BQ65 265 aaKnown RBP11.28□□□□□ -0.6
SKA3-206ENST00000475251 SLCO5A1Q9H2Y9 848 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 ALG2Q9H553 416 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 Q9N2J8 555 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 VPS29Q9UBQ0 182 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 MCM8Q9UJA3 840 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 CDC42EP3Q9UKI2 254 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 USF3Q68DE3 2245 aa11.28□□□□□ -0.6
SKA3-206ENST00000475251 A0A1W2PP18 115 aa11.27□□□□□ -0.61
SKA3-206ENST00000475251 GNG14A0A1W2PPG7 69 aa11.27□□□□□ -0.61
SKA3-206ENST00000475251 CLOCKO15516 846 aa11.27□□□□□ -0.61
SKA3-206ENST00000475251 PHF1O43189 567 aaPredicted RBP11.27□□□□□ -0.61
SKA3-206ENST00000475251 TUBBP07437 444 aa11.27□□□□□ -0.61
SKA3-206ENST00000475251 PABPC4LP0CB38 370 aaKnown RBP11.27□□□□□ -0.61
SKA3-206ENST00000475251 MAGEA4P43358 317 aa11.27□□□□□ -0.61
SKA3-206ENST00000475251 GSTM5P46439 218 aa11.27□□□□□ -0.61
SKA3-206ENST00000475251 PSG6Q00889 435 aa11.27□□□□□ -0.61
SKA3-206ENST00000475251 ZNHIT3Q15649 155 aaPredicted RBP11.27□□□□□ -0.61
SKA3-206ENST00000475251 SH2D4BQ5SQS7 431 aa11.27□□□□□ -0.61
SKA3-206ENST00000475251 PDSS1Q5T2R2 415 aa11.27□□□□□ -0.61
SKA3-206ENST00000475251 GGNQ86UU5 652 aa11.27□□□□□ -0.61
SKA3-206ENST00000475251 OR4N2Q8NGD1 307 aa11.27□□□□□ -0.61
SKA3-206ENST00000475251 DUSP19Q8WTR2 217 aa11.27□□□□□ -0.61
SKA3-206ENST00000475251 SMAP2Q8WU79 429 aaPredicted RBP11.27□□□□□ -0.61
SKA3-206ENST00000475251 GPR78Q96P69 363 aa11.27□□□□□ -0.61
SKA3-206ENST00000475251 TBL1XR1Q9BZK7 514 aa11.27□□□□□ -0.61
SKA3-206ENST00000475251 AMBRA1Q9C0C7 1298 aa11.27□□□□□ -0.61
SKA3-206ENST00000475251 VPS11Q9H270 941 aa11.27□□□□□ -0.61
SKA3-206ENST00000475251 ANKRA2Q9H9E1 313 aa11.27□□□□□ -0.61
SKA3-206ENST00000475251 C3orf14Q9HBI5 128 aa11.27□□□□□ -0.61
SKA3-206ENST00000475251 FARSBQ9NSD9 589 aaKnown RBP11.27□□□□□ -0.61
SKA3-206ENST00000475251 FAIMQ9NVQ4 179 aa11.27□□□□□ -0.61
SKA3-206ENST00000475251 LIPT1Q9Y234 373 aa11.27□□□□□ -0.61
SKA3-206ENST00000475251 ANK3Q12955 4377 aaKnown RBP11.26□□□□□ -0.61
SKA3-206ENST00000475251 A0A087WV62 115 aa11.26□□□□□ -0.61
SKA3-206ENST00000475251 A0A087WZY1 265 aa11.26□□□□□ -0.61
SKA3-206ENST00000475251 IGLV3-32A0A0A0MS00 114 aa11.26□□□□□ -0.61
SKA3-206ENST00000475251 IL33O95760 270 aa11.26□□□□□ -0.61
SKA3-206ENST00000475251 KRT6AP02538 564 aa11.26□□□□□ -0.61
SKA3-206ENST00000475251 KRT6BP04259 564 aa11.26□□□□□ -0.61
SKA3-206ENST00000475251 IL3P08700 152 aa11.26□□□□□ -0.61
SKA3-206ENST00000475251 DANCRP0C864 163 aa11.26□□□□□ -0.61
SKA3-206ENST00000475251 ACVR1BP36896 505 aa11.26□□□□□ -0.61
SKA3-206ENST00000475251 CDKN1AP38936 164 aa11.26□□□□□ -0.61
SKA3-206ENST00000475251 KRT6CP48668 564 aa11.26□□□□□ -0.61
SKA3-206ENST00000475251 CSTF3Q12996 717 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms