RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 PLEKHA3Q9HB20 300 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 MYNNQ9NPC7 610 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 A0A1W2PQL4 384 aaPredicted RBP10.37□□□□□ -0.75
VAPB-204ENST00000475243 ANKRD28O15084 1053 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 GPR39O43194 453 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 GGT1P19440 569 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 TP53I3Q53FA7 332 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 PIP5KL1Q5T9C9 394 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 GSG1LQ6UXU4 331 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 SDR9C7Q8NEX9 313 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 OR4K5Q8NGD3 323 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 SPTSSAQ969W0 71 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 ZNF160Q9HCG1 818 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 TRAPPC13A5PLN9 417 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 GOSR2O14653 212 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 LATS1O95835 1130 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 VEGFBP49765 207 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 NKX2-5P52952 324 aaPredicted RBP10.37□□□□□ -0.75
VAPB-204ENST00000475243 S100A12P80511 92 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 HSD11B1LQ7Z5J1 315 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 SERINC2Q96SA4 455 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 MKS1Q9NXB0 559 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 TRAV18A0A075B6X5 111 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 AQP2P41181 271 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 CSNK2A1P68400 391 aaPredicted RBP10.37□□□□□ -0.75
VAPB-204ENST00000475243 HOXC5Q00444 222 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 ZNF252P-AS1Q0IIN9 211 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 RCAN2Q14206 197 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 ZNF423Q2M1K9 1284 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 TCTE1Q5JU00 501 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 PAGE3Q5JUK9 113 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 CSNK2A3Q8NEV1 391 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 OR4D6Q8NGJ1 314 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 MYRFLQ96LU7 910 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 TSNAXQ99598 290 aaKnown RBP10.37□□□□□ -0.75
VAPB-204ENST00000475243 PAPOLGQ9BWT3 736 aaKnown RBP10.37□□□□□ -0.75
VAPB-204ENST00000475243 CDH20Q9HBT6 801 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 EEF1A1P68104 462 aaKnown RBP10.36□□□□□ -0.75
VAPB-204ENST00000475243 GSTM4Q03013 218 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 CDKN3Q16667 212 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 CNEP1R1Q8N9A8 125 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 ACVR1CQ8NER5 493 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 ANKK1Q8NFD2 765 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 RHBDF1Q96CC6 855 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 NECTIN4Q96NY8 510 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 ALG8Q9BVK2 526 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 SLC12A9Q9BXP2 914 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 RETREG1Q9H6L5 497 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 CD207Q9UJ71 328 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 PCDHGA8Q9Y5G5 932 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 DOT1LQ8TEK3 1739 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 H7C2Y5 167 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 NME4O00746 187 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 TPPPO94811 219 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 HPRP00739 348 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 GYPBP06028 91 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 IL7P13232 177 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 RGNQ15493 299 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 STEAP4Q687X5 459 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 TOMM40LQ969M1 308 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 TCEAL4Q96EI5 215 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 TOE1Q96GM8 510 aaKnown RBP10.36□□□□□ -0.75
VAPB-204ENST00000475243 SFXN2Q96NB2 322 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 ACTR6Q9GZN1 396 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 RHBDD3Q9Y3P4 386 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 SLC9B1P1A6NJY1 282 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 POLR1CO15160 346 aaPredicted RBP10.36□□□□□ -0.75
VAPB-204ENST00000475243 JRKO75564 520 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 RGS6P49758 472 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 RAB4BP61018 213 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 L3HYPDHQ96EM0 354 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 NMNAT1Q9HAN9 279 aaPredicted RBP10.36□□□□□ -0.75
VAPB-204ENST00000475243 AK1P00568 194 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 C6orf89Q6UWU4 347 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 NLKQ9UBE8 527 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 IER3IP1Q9Y5U9 82 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 PHRF1Q9P1Y6 1649 aaKnown RBP10.36□□□□□ -0.75
VAPB-204ENST00000475243 APLNRP35414 380 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 EPHA4P54764 986 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 MS4A4EQ96PG1 132 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 LHPPQ9H008 270 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 PLEKHJ1Q9NW61 149 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 SSTR4P31391 388 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 PSMB10P40306 273 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 NKX3-2P78367 333 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 RNASE10Q5GAN6 216 aaKnown RBP10.36□□□□□ -0.75
VAPB-204ENST00000475243 ENDOVQ8N8Q3 282 aaKnown RBP10.36□□□□□ -0.75
VAPB-204ENST00000475243 CD200R1Q8TD46 325 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 CDS1Q92903 461 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 GCDHQ92947 438 aaPredicted RBP10.36□□□□□ -0.75
VAPB-204ENST00000475243 TAF1P21675 1872 aa10.36□□□□□ -0.75
VAPB-204ENST00000475243 DRD1P21728 446 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 CD34P28906 385 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 PRDX3P30048 256 aaKnown RBP10.35□□□□□ -0.75
VAPB-204ENST00000475243 FOLR3P41439 243 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 CHRNEQ04844 493 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 EXOSC7Q15024 291 aaKnown RBP10.35□□□□□ -0.75
VAPB-204ENST00000475243 MICAQ29983 383 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 PCGF3Q3KNV8 242 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 SLC35F2Q8IXU6 374 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms