RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 FAM9CQ8IZT9 166 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 FADS6Q8N9I5 356 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 OR7G2Q8NG99 324 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 CDC26Q8NHZ8 85 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 ZNF483Q8TF39 744 aaPredicted RBP12.59□□□□□ -0.39
CCDC78-209ENST00000474647 AENQ8WTP8 325 aaKnown RBP12.59□□□□□ -0.39
CCDC78-209ENST00000474647 CAVIN3Q969G5 261 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 TXLNGYQ9BZA5 131 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 PRRG4Q9BZD6 226 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 CDC42EP4Q9H3Q1 356 aaKnown RBP12.59□□□□□ -0.39
CCDC78-209ENST00000474647 CXorf56Q9H5V9 222 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 PTGES2Q9H7Z7 377 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 TAS2R9Q9NYW1 312 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 FLRT3Q9NZU0 649 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 VPS29Q9UBQ0 182 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 MCM8Q9UJA3 840 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 ZNF175Q9Y473 711 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 ANK3Q12955 4377 aaKnown RBP12.59□□□□□ -0.39
CCDC78-209ENST00000474647 OR2M5A3KFT3 312 aa12.58□□□□□ -0.4
CCDC78-209ENST00000474647 PLGP00747 810 aaPredicted RBP12.58□□□□□ -0.4
CCDC78-209ENST00000474647 FCGR2AP12318 317 aa12.58□□□□□ -0.4
CCDC78-209ENST00000474647 ATP5J2P56134 94 aa12.58□□□□□ -0.4
CCDC78-209ENST00000474647 TSNAXIP1Q2TAA8 658 aa12.58□□□□□ -0.4
CCDC78-209ENST00000474647 BEX5Q5H9J7 111 aa12.58□□□□□ -0.4
CCDC78-209ENST00000474647 UBAP2Q5T6F2 1119 aaKnown RBP12.58□□□□□ -0.4
CCDC78-209ENST00000474647 LGSNQ5TDP6 509 aa12.58□□□□□ -0.4
CCDC78-209ENST00000474647 EMBQ6PCB8 327 aa12.58□□□□□ -0.4
CCDC78-209ENST00000474647 FAM214BQ7L5A3 538 aa12.58□□□□□ -0.4
CCDC78-209ENST00000474647 CDYL2Q8N8U2 506 aa12.58□□□□□ -0.4
CCDC78-209ENST00000474647 SPATA3Q8NHX4 192 aa12.58□□□□□ -0.4
CCDC78-209ENST00000474647 UHMK1Q8TAS1 419 aaKnown RBP12.58□□□□□ -0.4
CCDC78-209ENST00000474647 RNF138Q8WVD3 245 aa12.58□□□□□ -0.4
CCDC78-209ENST00000474647 GFM2Q969S9 779 aaKnown RBP12.58□□□□□ -0.4
CCDC78-209ENST00000474647 ERP27Q96DN0 273 aa12.58□□□□□ -0.4
CCDC78-209ENST00000474647 BBS4Q96RK4 519 aa12.58□□□□□ -0.4
CCDC78-209ENST00000474647 EBPLQ9BY08 206 aa12.58□□□□□ -0.4
CCDC78-209ENST00000474647 SDHAF3Q9NRP4 125 aa12.58□□□□□ -0.4
CCDC78-209ENST00000474647 NINJ2Q9NZG7 142 aa12.58□□□□□ -0.4
CCDC78-209ENST00000474647 EMC9Q9Y3B6 208 aa12.58□□□□□ -0.4
CCDC78-209ENST00000474647 ABCA1O95477 2261 aa12.58□□□□□ -0.4
CCDC78-209ENST00000474647 SHISA8B8ZZ34 492 aa12.57□□□□□ -0.4
CCDC78-209ENST00000474647 MANBAO00462 879 aa12.57□□□□□ -0.4
CCDC78-209ENST00000474647 COQ9O75208 318 aa12.57□□□□□ -0.4
CCDC78-209ENST00000474647 AQP8O94778 261 aa12.57□□□□□ -0.4
CCDC78-209ENST00000474647 PLAUP00749 431 aa12.57□□□□□ -0.4
CCDC78-209ENST00000474647 THBDP07204 575 aa12.57□□□□□ -0.4
CCDC78-209ENST00000474647 INHBAP08476 426 aa12.57□□□□□ -0.4
CCDC78-209ENST00000474647 RAE1P78406 368 aaKnown RBP12.57□□□□□ -0.4
CCDC78-209ENST00000474647 CSTF3Q12996 717 aaKnown RBP12.57□□□□□ -0.4
CCDC78-209ENST00000474647 HEPACAMQ14CZ8 416 aa12.57□□□□□ -0.4
CCDC78-209ENST00000474647 ALKBH2Q6NS38 261 aa12.57□□□□□ -0.4
CCDC78-209ENST00000474647 WFDC8Q8IUA0 241 aa12.57□□□□□ -0.4
CCDC78-209ENST00000474647 SAMD14Q8IZD0 417 aaPredicted RBP12.57□□□□□ -0.4
CCDC78-209ENST00000474647 MAPK1IP1LQ8NDC0 245 aa12.57□□□□□ -0.4
CCDC78-209ENST00000474647 C1GALT1C1Q96EU7 318 aa12.57□□□□□ -0.4
CCDC78-209ENST00000474647 PLPPR2Q96GM1 343 aa12.57□□□□□ -0.4
CCDC78-209ENST00000474647 MRPL46Q9H2W6 279 aaKnown RBP12.57□□□□□ -0.4
CCDC78-209ENST00000474647 ACSS3Q9H6R3 686 aa12.57□□□□□ -0.4
CCDC78-209ENST00000474647 SLC35C2Q9NQQ7 365 aa12.57□□□□□ -0.4
CCDC78-209ENST00000474647 CLEC4AQ9UMR7 237 aa12.57□□□□□ -0.4
CCDC78-209ENST00000474647 ABCG2Q9UNQ0 655 aa12.57□□□□□ -0.4
CCDC78-209ENST00000474647 YLPM1P49750 1951 aaKnown RBP12.57□□□□□ -0.4
CCDC78-209ENST00000474647 A8MT66 165 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 LINC01387J3KSC0 135 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 EIF1AYO14602 144 aaKnown RBP12.56□□□□□ -0.4
CCDC78-209ENST00000474647 FADS1O60427 444 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 PLOD3O60568 738 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 CRLF1O75462 422 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 KRT6AP02538 564 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 KRT6BP04259 564 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 JUNP05412 331 aaKnown RBP12.56□□□□□ -0.4
CCDC78-209ENST00000474647 HSD3B1P14060 373 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 CHN1P15882 459 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 HSD3B2P26439 372 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 HMOX2P30519 316 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 MPIP34949 423 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 EIF1AXP47813 144 aaKnown RBP12.56□□□□□ -0.4
CCDC78-209ENST00000474647 KRT6CP48668 564 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 CLK3P49761 638 aaKnown RBP12.56□□□□□ -0.4
CCDC78-209ENST00000474647 CTBP2P56545 445 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 PSG6Q00889 435 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 CLCQ05315 142 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 BTKQ06187 659 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 ACSM2AQ08AH3 577 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 VEZF1Q14119 521 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 DECR1Q16698 335 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 ACSM2BQ68CK6 577 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 TMEM107Q6UX40 140 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 TRMT10CQ7L0Y3 403 aaKnown RBP12.56□□□□□ -0.4
CCDC78-209ENST00000474647 MARCH3Q86UD3 253 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 METTL25Q8N6Q8 603 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 OR6K3Q8NGY3 331 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 C16orf78Q8WTQ4 265 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 DUSP19Q8WTR2 217 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 APIPQ96GX9 242 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 MRPL57Q9BQC6 102 aaKnown RBP12.56□□□□□ -0.4
CCDC78-209ENST00000474647 RTN4RQ9BZR6 473 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 ZNF225Q9UK10 706 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 VDAC3Q9Y277 283 aa12.56□□□□□ -0.4
CCDC78-209ENST00000474647 CCDC151A5D8V7 595 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms