RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 TJAP1Q5JTD0 557 aa10.24□□□□□ -0.77
C9orf3-214ENST00000473778 SNAP47Q5SQN1 464 aa10.24□□□□□ -0.77
C9orf3-214ENST00000473778 AADACL4Q5VUY2 407 aa10.24□□□□□ -0.77
C9orf3-214ENST00000473778 CNIH2Q6PI25 160 aa10.24□□□□□ -0.77
C9orf3-214ENST00000473778 HSDL2Q6YN16 418 aa10.24□□□□□ -0.77
C9orf3-214ENST00000473778 POGLUT1Q8NBL1 392 aa10.24□□□□□ -0.77
C9orf3-214ENST00000473778 OR52E1Q8NGJ3 308 aa10.24□□□□□ -0.77
C9orf3-214ENST00000473778 TMEM255BQ8WV15 326 aa10.24□□□□□ -0.77
C9orf3-214ENST00000473778 ZNF681Q96N22 645 aa10.24□□□□□ -0.77
C9orf3-214ENST00000473778 HDAC8Q9BY41 377 aa10.24□□□□□ -0.77
C9orf3-214ENST00000473778 SLC22A4Q9H015 551 aa10.24□□□□□ -0.77
C9orf3-214ENST00000473778 C11orf49Q9H6J7 331 aa10.24□□□□□ -0.77
C9orf3-214ENST00000473778 PPP1R3EQ9H7J1 279 aa10.24□□□□□ -0.77
C9orf3-214ENST00000473778 C12orf10Q9HB07 376 aa10.24□□□□□ -0.77
C9orf3-214ENST00000473778 TMEM74BQ9NUR3 256 aa10.24□□□□□ -0.77
C9orf3-214ENST00000473778 KCNN3Q9UGI6 736 aa10.24□□□□□ -0.77
C9orf3-214ENST00000473778 ZFR2Q9UPR6 939 aaKnown RBP10.24□□□□□ -0.77
C9orf3-214ENST00000473778 MAU2Q9Y6X3 613 aa10.24□□□□□ -0.77
C9orf3-214ENST00000473778 A0A0G2JPF8 293 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 ZC3H12DA2A288 527 aaKnown RBP10.23□□□□□ -0.77
C9orf3-214ENST00000473778 TBC1D3BA6NDS4 549 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 HMX3A6NHT5 357 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 HNRNPCL2B2RXH8 293 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 HNRNPCL3B7ZW38 293 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 SLC30A4O14863 429 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 EFCAB14O75071 495 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 DNAJB6O75190 326 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 FAM157BP0CG42 384 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 HNRNPCL4P0DMR1 293 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 CELP19835 753 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 PKLRP30613 574 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 FGF9P31371 208 aaPredicted RBP10.23□□□□□ -0.77
C9orf3-214ENST00000473778 HSD17B2P37059 387 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 CDH11P55287 796 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 UBE3AQ05086 875 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 DUSP6Q16828 381 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 EOGTQ5NDL2 527 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 PDZK1Q5T2W1 519 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 SLC48A1Q6P1K1 146 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 RASSF6Q6ZTQ3 369 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 SLC51BQ86UW2 128 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 CCDC28AQ8IWP9 274 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 GALNT12Q8IXK2 581 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 NRMQ8IXM6 262 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 SIRT6Q8N6T7 355 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 SLC16A11Q8NCK7 471 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 UFD1Q92890 307 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 ELP4Q96EB1 424 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 DEPDC7Q96QD5 511 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 TIMP4Q99727 224 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 ATF6BQ99941 703 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 PITHD1Q9GZP4 211 aaPredicted RBP10.23□□□□□ -0.77
C9orf3-214ENST00000473778 RNF32Q9H0A6 362 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 ENKD1Q9H0I2 346 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 ISG20L2Q9H9L3 353 aaKnown RBP10.23□□□□□ -0.77
C9orf3-214ENST00000473778 TBC1D17Q9HA65 648 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 PRR23AA6NEV1 266 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 CD8B2A6NJW9 211 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 SOCS6O14544 535 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 KLF4O43474 513 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 HRO43593 1189 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 HNRNPA1P09651 372 aaKnown RBP eCLIP10.23□□□□□ -0.77
C9orf3-214ENST00000473778 CD8BP10966 210 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 GSTM3P21266 225 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 MYL9P24844 172 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 RPS5P46782 204 aaKnown RBP10.23□□□□□ -0.77
C9orf3-214ENST00000473778 RNF144AP50876 292 aaPredicted RBP10.23□□□□□ -0.77
C9orf3-214ENST00000473778 FXYD6P3P58550 94 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 CD83Q01151 205 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 TMEM91Q6ZNR0 172 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 VWA5B2Q8N398 1253 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 BMPERQ8N8U9 685 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 GDPD1Q8N9F7 314 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 TMEM145Q8NBT3 493 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 KCT2Q8NC54 265 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 NUP43Q8NFH3 380 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 OR2L3Q8NG85 312 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 DOK4Q8TEW6 326 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 SUSD6Q92537 303 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 ARMC5Q96C12 935 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 SLC35A4Q96G79 324 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 NECTIN4Q96NY8 510 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 TMEM246Q9BRR3 403 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 PRRG3Q9BZD7 231 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 PPIL3Q9H2H8 161 aaKnown RBP10.23□□□□□ -0.77
C9orf3-214ENST00000473778 WDR26Q9H7D7 661 aa10.23□□□□□ -0.77
C9orf3-214ENST00000473778 MRPS30Q9NP92 439 aaKnown RBP10.23□□□□□ -0.77
C9orf3-214ENST00000473778 SIRT4Q9Y6E7 314 aaPredicted RBP10.23□□□□□ -0.77
C9orf3-214ENST00000473778 CCDC182A6NF36 153 aa10.22□□□□□ -0.77
C9orf3-214ENST00000473778 CENPXA8MT69 81 aa10.22□□□□□ -0.77
C9orf3-214ENST00000473778 B8ZZF3 427 aa10.22□□□□□ -0.77
C9orf3-214ENST00000473778 GABRPO00591 440 aa10.22□□□□□ -0.77
C9orf3-214ENST00000473778 CASKO14936 926 aa10.22□□□□□ -0.77
C9orf3-214ENST00000473778 PROM1O43490 865 aa10.22□□□□□ -0.77
C9orf3-214ENST00000473778 ALPPP05187 535 aa10.22□□□□□ -0.77
C9orf3-214ENST00000473778 ZGLP1P0C6A0 271 aa10.22□□□□□ -0.77
C9orf3-214ENST00000473778 MYOGP15173 224 aa10.22□□□□□ -0.77
C9orf3-214ENST00000473778 TBXA2RP21731 343 aa10.22□□□□□ -0.77
C9orf3-214ENST00000473778 CTAG1AP78358 180 aa10.22□□□□□ -0.77
C9orf3-214ENST00000473778 FAM214AQ32MH5 1076 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms