RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 IL11P20809 199 aa11.26□□□□□ -0.61
TRAF4-209ENST00000473421 EIF1AXP47813 144 aaKnown RBP11.26□□□□□ -0.61
TRAF4-209ENST00000473421 PLTPP55058 493 aa11.26□□□□□ -0.61
TRAF4-209ENST00000473421 FAPQ12884 760 aa11.26□□□□□ -0.61
TRAF4-209ENST00000473421 SGCBQ16585 318 aa11.26□□□□□ -0.61
TRAF4-209ENST00000473421 PODNL1Q6PEZ8 512 aa11.26□□□□□ -0.61
TRAF4-209ENST00000473421 GALNT10Q86SR1 603 aa11.26□□□□□ -0.61
TRAF4-209ENST00000473421 TMEM151AQ8N4L1 468 aa11.26□□□□□ -0.61
TRAF4-209ENST00000473421 OR6K3Q8NGY3 331 aa11.26□□□□□ -0.61
TRAF4-209ENST00000473421 OR10D3Q8NH80 312 aa11.26□□□□□ -0.61
TRAF4-209ENST00000473421 FBXO25Q8TCJ0 367 aa11.26□□□□□ -0.61
TRAF4-209ENST00000473421 SELENOMQ8WWX9 145 aa11.26□□□□□ -0.61
TRAF4-209ENST00000473421 S100PBPQ96BU1 408 aa11.26□□□□□ -0.61
TRAF4-209ENST00000473421 MTBPQ96DY7 904 aa11.26□□□□□ -0.61
TRAF4-209ENST00000473421 ZBED6CLQ96FA7 236 aaPredicted RBP11.26□□□□□ -0.61
TRAF4-209ENST00000473421 ADGRG7Q96K78 797 aa11.26□□□□□ -0.61
TRAF4-209ENST00000473421 ELOVL6Q9H5J4 265 aa11.26□□□□□ -0.61
TRAF4-209ENST00000473421 SVEP1Q4LDE5 3571 aa11.26□□□□□ -0.61
TRAF4-209ENST00000473421 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.25□□□□□ -0.614e-21■■■■□ 24.2
TRAF4-209ENST00000473421 IGHV4-30-2A0A087WSY4 118 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 GXYLT2A0PJZ3 443 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 CCDC188H7C350 402 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 CXCL13O43927 109 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 PLOD3O60568 738 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 RAMP1O60894 148 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 SS18L1O75177 396 aaPredicted RBP11.25□□□□□ -0.61
TRAF4-209ENST00000473421 OR4F21O95013 312 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 C8BP07358 591 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 RPS17P08708 135 aaKnown RBP11.25□□□□□ -0.61
TRAF4-209ENST00000473421 GSTA2P09210 222 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 SHC1P29353 583 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 KRT20P35900 424 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 RFX3P48380 749 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 HTR6P50406 440 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 EEFSECP57772 596 aaKnown RBP11.25□□□□□ -0.61
TRAF4-209ENST00000473421 GGTA1PQ4G0N0 100 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 ADAM5Q6NVV9 412 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 NUFIP2Q7Z417 695 aaKnown RBP11.25□□□□□ -0.61
TRAF4-209ENST00000473421 KBTBD8Q8NFY9 601 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 ZNF483Q8TF39 744 aaPredicted RBP11.25□□□□□ -0.61
TRAF4-209ENST00000473421 SMAP2Q8WU79 429 aaPredicted RBP11.25□□□□□ -0.61
TRAF4-209ENST00000473421 TMEM158Q8WZ71 300 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 ROBO4Q8WZ75 1007 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 SLC9A6Q92581 669 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 HTRA1Q92743 480 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 APIPQ96GX9 242 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 EBPLQ9BY08 206 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 TMEM185BQ9H7F4 350 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 XPR1Q9UBH6 696 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 DMGDHQ9UI17 866 aaKnown RBP11.25□□□□□ -0.61
TRAF4-209ENST00000473421 PSME2Q9UL46 239 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 VDAC3Q9Y277 283 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 OR10H1Q9Y4A9 318 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 AP4B1Q9Y6B7 739 aa11.25□□□□□ -0.61
TRAF4-209ENST00000473421 A0A0J9YW62 118 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 DPRXA6NFQ7 191 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 STX16-NPEPL1H3BU86 382 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 MANBAO00462 879 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 STX16O14662 325 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 TNFSF11O14788 317 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 TLX2O43763 284 aaPredicted RBP11.24□□□□□ -0.61
TRAF4-209ENST00000473421 GUCY1B2O75343 617 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 GCM2O75603 506 aaPredicted RBP11.24□□□□□ -0.61
TRAF4-209ENST00000473421 ESRRBO95718 433 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 JUNP05412 331 aaKnown RBP11.24□□□□□ -0.61
TRAF4-209ENST00000473421 PPP3CBP16298 524 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 PSMA4P25789 261 aaKnown RBP11.24□□□□□ -0.61
TRAF4-209ENST00000473421 TYK2P29597 1187 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 IDUAP35475 653 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 OCRLQ01968 901 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 C2orf54Q08AI8 447 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 ZNF155Q12901 538 aaPredicted RBP11.24□□□□□ -0.61
TRAF4-209ENST00000473421 CALCOCO2Q13137 446 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 TAB1Q15750 504 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 UAP1Q16222 522 aaPredicted RBP11.24□□□□□ -0.61
TRAF4-209ENST00000473421 ERCC6LQ2NKX8 1250 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 GRAMD1BQ3KR37 738 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 NCMAPQ5T1S8 102 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 METTL2BQ6P1Q9 378 aaKnown RBP11.24□□□□□ -0.61
TRAF4-209ENST00000473421 ZAR1Q86SH2 424 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 EXOC3L1Q86VI1 746 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 CEP112Q8N8E3 955 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 GBP7Q8N8V2 638 aaPredicted RBP11.24□□□□□ -0.61
TRAF4-209ENST00000473421 C16orf78Q8WTQ4 265 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 GMPPAQ96IJ6 420 aaPredicted RBP11.24□□□□□ -0.61
TRAF4-209ENST00000473421 FAIM2Q9BWQ8 316 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 ACPTQ9BZG2 426 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 SLC35C2Q9NQQ7 365 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 VPS29Q9UBQ0 182 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 EMC9Q9Y3B6 208 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 RNF115Q9Y4L5 304 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 SAR1BQ9Y6B6 198 aa11.24□□□□□ -0.61
TRAF4-209ENST00000473421 A8MV72 311 aaPredicted RBP11.23□□□□□ -0.61
TRAF4-209ENST00000473421 UPK1AO00322 258 aa11.23□□□□□ -0.61
TRAF4-209ENST00000473421 EFNA2O43921 213 aa11.23□□□□□ -0.61
TRAF4-209ENST00000473421 BCAS2O75934 225 aaPredicted RBP11.23□□□□□ -0.61
TRAF4-209ENST00000473421 UTS2O95399 124 aa11.23□□□□□ -0.61
TRAF4-209ENST00000473421 PSMG1O95456 288 aa11.23□□□□□ -0.61
TRAF4-209ENST00000473421 ANGPTL1O95841 491 aa11.23□□□□□ -0.61
TRAF4-209ENST00000473421 PLGP00747 810 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms