RNA–Protein interactions for RNA: ENST00000473405.1

CCDC88B-206, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best)

Gene CCDC88B, Length 783 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-206ENST00000473405 GXYLT2A0PJZ3 443 aa16.97■□□□□ 0.31
CCDC88B-206ENST00000473405 H0YC42 278 aa16.97■□□□□ 0.31
CCDC88B-206ENST00000473405 AZIN1O14977 448 aa16.97■□□□□ 0.31
CCDC88B-206ENST00000473405 PDPK1O15530 556 aa16.97■□□□□ 0.31
CCDC88B-206ENST00000473405 RGS14O43566 566 aa16.97■□□□□ 0.31
CCDC88B-206ENST00000473405 IGKV1D-16P01601 117 aa16.97■□□□□ 0.31
CCDC88B-206ENST00000473405 TPD52P55327 224 aaPredicted RBP16.97■□□□□ 0.31
CCDC88B-206ENST00000473405 PDE7AQ13946 482 aa16.97■□□□□ 0.31
CCDC88B-206ENST00000473405 ZNHIT3Q15649 155 aaPredicted RBP16.97■□□□□ 0.31
CCDC88B-206ENST00000473405 RAET1LQ5VY80 246 aa16.97■□□□□ 0.31
CCDC88B-206ENST00000473405 KANK2Q63ZY3 851 aa16.97■□□□□ 0.31
CCDC88B-206ENST00000473405 APOOLQ6UXV4 268 aa16.97■□□□□ 0.31
CCDC88B-206ENST00000473405 MARCH3Q86UD3 253 aa16.97■□□□□ 0.31
CCDC88B-206ENST00000473405 UBQLNLQ8IYU4 475 aa16.97■□□□□ 0.31
CCDC88B-206ENST00000473405 C1GALT1C1Q96EU7 318 aa16.97■□□□□ 0.31
CCDC88B-206ENST00000473405 TMUB1Q9BVT8 246 aa16.97■□□□□ 0.31
CCDC88B-206ENST00000473405 PIGMQ9H3S5 423 aa16.97■□□□□ 0.31
CCDC88B-206ENST00000473405 L2HGDHQ9H9P8 463 aa16.97■□□□□ 0.31
CCDC88B-206ENST00000473405 EQTNQ9NQ60 294 aa16.97■□□□□ 0.31
CCDC88B-206ENST00000473405 MKS1Q9NXB0 559 aa16.97■□□□□ 0.31
CCDC88B-206ENST00000473405 PACSIN3Q9UKS6 424 aa16.97■□□□□ 0.31
CCDC88B-206ENST00000473405 FIS1Q9Y3D6 152 aa16.97■□□□□ 0.31
CCDC88B-206ENST00000473405 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.96■□□□□ 0.31
CCDC88B-206ENST00000473405 IGLV3-32A0A0A0MS00 114 aa16.96■□□□□ 0.31
CCDC88B-206ENST00000473405 A8MXE2 369 aa16.96■□□□□ 0.31
CCDC88B-206ENST00000473405 TMEM233B4DJY2 109 aa16.96■□□□□ 0.31
CCDC88B-206ENST00000473405 SLC28A1O00337 649 aa16.96■□□□□ 0.31
CCDC88B-206ENST00000473405 LSM1O15116 133 aaKnown RBP16.96■□□□□ 0.31
CCDC88B-206ENST00000473405 TBX19O60806 448 aa16.96■□□□□ 0.31
CCDC88B-206ENST00000473405 UTS2O95399 124 aa16.96■□□□□ 0.31
CCDC88B-206ENST00000473405 NEFHP12036 1026 aa16.96■□□□□ 0.31
CCDC88B-206ENST00000473405 HK1P19367 917 aa16.96■□□□□ 0.31
CCDC88B-206ENST00000473405 FRKP42685 505 aaPredicted RBP16.96■□□□□ 0.31
CCDC88B-206ENST00000473405 CPA2P48052 419 aa16.96■□□□□ 0.31
CCDC88B-206ENST00000473405 RFX3P48380 749 aa16.96■□□□□ 0.31
CCDC88B-206ENST00000473405 RPL38P63173 70 aaKnown RBP16.96■□□□□ 0.31
CCDC88B-206ENST00000473405 RFTN2Q52LD8 501 aaPredicted RBP16.96■□□□□ 0.31
CCDC88B-206ENST00000473405 OR5M1Q8NGP8 315 aa16.96■□□□□ 0.31
CCDC88B-206ENST00000473405 DUSP19Q8WTR2 217 aa16.96■□□□□ 0.31
CCDC88B-206ENST00000473405 PIK3R3Q92569 461 aa16.96■□□□□ 0.31
CCDC88B-206ENST00000473405 GIMAP5Q96F15 307 aa16.96■□□□□ 0.31
CCDC88B-206ENST00000473405 TSSK3Q96PN8 268 aa16.96■□□□□ 0.31
CCDC88B-206ENST00000473405 ALPK1Q96QP1 1244 aa16.96■□□□□ 0.31
CCDC88B-206ENST00000473405 TRMOQ9BU70 441 aa16.96■□□□□ 0.31
CCDC88B-206ENST00000473405 PLEKHF2Q9H8W4 249 aa16.96■□□□□ 0.31
CCDC88B-206ENST00000473405 SDHAF3Q9NRP4 125 aa16.96■□□□□ 0.31
CCDC88B-206ENST00000473405 ZNF337Q9Y3M9 751 aa16.96■□□□□ 0.31
CCDC88B-206ENST00000473405 DNAJC15Q9Y5T4 150 aa16.96■□□□□ 0.31
CCDC88B-206ENST00000473405 NAV3Q8IVL0 2385 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 A0A1W2PPR1 153 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 OR2M5A3KFT3 312 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 SH3D21A4FU49 640 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 SLC22A20A6NK97 555 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 AKAP10O43572 662 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 HRGP04196 525 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 CHRNGP07510 517 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 LINC00032P0C843 101 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 PRPS2P11908 318 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 PEPDP12955 493 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 DNASE1P24855 282 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 GABRA3P34903 492 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 SUCLG1P53597 346 aaKnown RBP16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 PRR5P85299 388 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 TMEM44Q2T9K0 475 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 GRAMD1BQ3KR37 738 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 TGIF2LYQ8IUE0 185 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 OR2W6PQ8NHA6 318 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 CLHC1Q8NHS4 586 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 MBD6Q96DN6 1003 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 STARD4Q96DR4 205 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 APOPT1Q96IL0 206 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 DACH2Q96NX9 599 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 REEP4Q9H6H4 257 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 NTMQ9P121 344 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 BAIAP2L1Q9UHR4 511 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 MID2Q9UJV3 735 aa16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 MRTO4Q9UKD2 239 aaKnown RBP16.95■□□□□ 0.3
CCDC88B-206ENST00000473405 TTC36A6NLP5 189 aa16.94■□□□□ 0.3
CCDC88B-206ENST00000473405 MSTNO14793 375 aa16.94■□□□□ 0.3
CCDC88B-206ENST00000473405 TRIM13O60858 407 aa16.94■□□□□ 0.3
CCDC88B-206ENST00000473405 NKX2-2O95096 273 aa16.94■□□□□ 0.3
CCDC88B-206ENST00000473405 GOSR1O95249 250 aa16.94■□□□□ 0.3
CCDC88B-206ENST00000473405 KCNH1O95259 989 aa16.94■□□□□ 0.3
CCDC88B-206ENST00000473405 ATE1O95260 518 aa16.94■□□□□ 0.3
CCDC88B-206ENST00000473405 ANGPTL1O95841 491 aa16.94■□□□□ 0.3
CCDC88B-206ENST00000473405 CRHP06850 196 aa16.94■□□□□ 0.3
CCDC88B-206ENST00000473405 GPC1P35052 558 aa16.94■□□□□ 0.3
CCDC88B-206ENST00000473405 CPOXP36551 454 aa16.94■□□□□ 0.3
CCDC88B-206ENST00000473405 PSMD4P55036 377 aaKnown RBP16.94■□□□□ 0.3
CCDC88B-206ENST00000473405 CLDN20P56880 219 aa16.94■□□□□ 0.3
CCDC88B-206ENST00000473405 UGT3A2Q3SY77 523 aa16.94■□□□□ 0.3
CCDC88B-206ENST00000473405 FBXW10Q5XX13 1052 aa16.94■□□□□ 0.3
CCDC88B-206ENST00000473405 VWA1Q6PCB0 445 aa16.94■□□□□ 0.3
CCDC88B-206ENST00000473405 GALNT10Q86SR1 603 aa16.94■□□□□ 0.3
CCDC88B-206ENST00000473405 EXOC3L1Q86VI1 746 aa16.94■□□□□ 0.3
CCDC88B-206ENST00000473405 MEIOBQ8N635 442 aa16.94■□□□□ 0.3
CCDC88B-206ENST00000473405 BANPQ8N9N5 519 aa16.94■□□□□ 0.3
CCDC88B-206ENST00000473405 CHDHQ8NE62 594 aaPredicted RBP16.94■□□□□ 0.3
CCDC88B-206ENST00000473405 FBXO30Q8TB52 745 aa16.94■□□□□ 0.3
CCDC88B-206ENST00000473405 GPR151Q8TDV0 419 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms