RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 TRIM42Q8IWZ5 723 aa20.48■□□□□ 0.87
PTP4A1-203ENST00000473334 KIRREL3Q8IZU9 778 aa20.48■□□□□ 0.87
PTP4A1-203ENST00000473334 NATD1Q8N6N6 113 aa20.48■□□□□ 0.87
PTP4A1-203ENST00000473334 FADS6Q8N9I5 356 aa20.48■□□□□ 0.87
PTP4A1-203ENST00000473334 PIK3R3Q92569 461 aa20.48■□□□□ 0.87
PTP4A1-203ENST00000473334 SLC9A6Q92581 669 aa20.48■□□□□ 0.87
PTP4A1-203ENST00000473334 PRPF18Q99633 342 aaKnown RBP20.48■□□□□ 0.87
PTP4A1-203ENST00000473334 C20orf27Q9GZN8 174 aa20.48■□□□□ 0.87
PTP4A1-203ENST00000473334 SIRT3Q9NTG7 399 aaPredicted RBP20.48■□□□□ 0.87
PTP4A1-203ENST00000473334 MED12Q93074 2177 aa20.48■□□□□ 0.87
PTP4A1-203ENST00000473334 INTS1Q8N201 2190 aaKnown RBP20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 CD8B2A6NJW9 211 aa20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 C17orf51A8MQB3 221 aa20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 ERLIN1O75477 346 aa20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 UTS2O95399 124 aa20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 IGKV1D-16P01601 117 aa20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 ACP2P11117 423 aa20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 CPN1P15169 458 aa20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 BGNP21810 368 aa20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 DPP4P27487 766 aa20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 SSTR2P30874 369 aa20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 CEACAM8P31997 349 aaPredicted RBP20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 CLK3P49761 638 aaKnown RBP20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 DSCR4P56555 118 aaPredicted RBP20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 WNT3P56703 355 aa20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 EMX2Q04743 252 aa20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 RCAN2Q14206 197 aa20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 SMU1Q2TAY7 513 aa20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 AAGABQ6PD74 315 aa20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 ZCCHC12Q6PEW1 402 aa20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 TNIP2Q8NFZ5 429 aa20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 FBXO30Q8TB52 745 aa20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 FAM120BQ96EK7 910 aaKnown RBP20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 TRIB1Q96RU8 372 aa20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 SORT1Q99523 831 aa20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 ZCCHC3Q9NUD5 404 aaKnown RBP20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 ASIC5Q9NY37 505 aa20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 NOP53Q9NZM5 478 aaKnown RBP20.47■□□□□ 0.87
PTP4A1-203ENST00000473334 KIAA1549Q9HCM3 1950 aa20.46■□□□□ 0.87
PTP4A1-203ENST00000473334 IL2RAP01589 272 aa20.46■□□□□ 0.87
PTP4A1-203ENST00000473334 G6PDP11413 515 aa20.46■□□□□ 0.87
PTP4A1-203ENST00000473334 PRIM2P49643 509 aa20.46■□□□□ 0.87
PTP4A1-203ENST00000473334 RPL14P50914 215 aaKnown RBP20.46■□□□□ 0.87
PTP4A1-203ENST00000473334 STX5Q13190 355 aa20.46■□□□□ 0.87
PTP4A1-203ENST00000473334 STX3Q13277 289 aa20.46■□□□□ 0.87
PTP4A1-203ENST00000473334 RIMKLAQ8IXN7 391 aa20.46■□□□□ 0.87
PTP4A1-203ENST00000473334 KRTCAP2Q8N6L1 136 aa20.46■□□□□ 0.87
PTP4A1-203ENST00000473334 SLC16A11Q8NCK7 471 aa20.46■□□□□ 0.87
PTP4A1-203ENST00000473334 NAXEQ8NCW5 288 aa20.46■□□□□ 0.87
PTP4A1-203ENST00000473334 OR2M3Q8NG83 312 aa20.46■□□□□ 0.87
PTP4A1-203ENST00000473334 ZPLD1Q8TCW7 415 aa20.46■□□□□ 0.87
PTP4A1-203ENST00000473334 OR5P2Q8WZ92 322 aa20.46■□□□□ 0.87
PTP4A1-203ENST00000473334 COQ8BQ96D53 544 aa20.46■□□□□ 0.87
PTP4A1-203ENST00000473334 C14orf79Q96F83 325 aa20.46■□□□□ 0.87
PTP4A1-203ENST00000473334 PPP1R36Q96LQ0 422 aa20.46■□□□□ 0.87
PTP4A1-203ENST00000473334 SFXN2Q96NB2 322 aa20.46■□□□□ 0.87
PTP4A1-203ENST00000473334 TBL1XR1Q9BZK7 514 aa20.46■□□□□ 0.87
PTP4A1-203ENST00000473334 RTN4RQ9BZR6 473 aa20.46■□□□□ 0.87
PTP4A1-203ENST00000473334 DSN1Q9H410 356 aa20.46■□□□□ 0.87
PTP4A1-203ENST00000473334 CALHM2Q9HA72 323 aa20.46■□□□□ 0.87
PTP4A1-203ENST00000473334 HAO1Q9UJM8 370 aa20.46■□□□□ 0.87
PTP4A1-203ENST00000473334 MBD3L4A6NDZ8 208 aaPredicted RBP20.45■□□□□ 0.86
PTP4A1-203ENST00000473334 MBD3L3A6NE82 208 aaPredicted RBP20.45■□□□□ 0.86
PTP4A1-203ENST00000473334 MBD3L5A6NJ08 208 aaPredicted RBP20.45■□□□□ 0.86
PTP4A1-203ENST00000473334 ZIC3O60481 467 aa20.45■□□□□ 0.86
PTP4A1-203ENST00000473334 ALOX5P09917 674 aa20.45■□□□□ 0.86
PTP4A1-203ENST00000473334 CHMP24386 653 aa20.45■□□□□ 0.86
PTP4A1-203ENST00000473334 C21orf58P58505 322 aa20.45■□□□□ 0.86
PTP4A1-203ENST00000473334 GANABQ14697 944 aaKnown RBP20.45■□□□□ 0.86
PTP4A1-203ENST00000473334 DUSP5Q16690 384 aa20.45■□□□□ 0.86
PTP4A1-203ENST00000473334 GRAMD1BQ3KR37 738 aa20.45■□□□□ 0.86
PTP4A1-203ENST00000473334 HHATQ5VTY9 493 aa20.45■□□□□ 0.86
PTP4A1-203ENST00000473334 MARCH3Q86UD3 253 aa20.45■□□□□ 0.86
PTP4A1-203ENST00000473334 ANKRD42Q8N9B4 389 aa20.45■□□□□ 0.86
PTP4A1-203ENST00000473334 MBD3L2Q8NHZ7 208 aaPredicted RBP20.45■□□□□ 0.86
PTP4A1-203ENST00000473334 PSMA8Q8TAA3 256 aa20.45■□□□□ 0.86
PTP4A1-203ENST00000473334 C16orf58Q96GQ5 468 aa20.45■□□□□ 0.86
PTP4A1-203ENST00000473334 PAIP2Q9BPZ3 127 aaKnown RBP20.45■□□□□ 0.86
PTP4A1-203ENST00000473334 BHLHE41Q9C0J9 482 aaPredicted RBP20.45■□□□□ 0.86
PTP4A1-203ENST00000473334 AKTIPQ9H8T0 292 aa20.45■□□□□ 0.86
PTP4A1-203ENST00000473334 RPH3AQ9Y2J0 694 aaPredicted RBP20.45■□□□□ 0.86
PTP4A1-203ENST00000473334 SNX8Q9Y5X2 465 aa20.45■□□□□ 0.86
PTP4A1-203ENST00000473334 H0Y3Z8 333 aa20.44■□□□□ 0.86
PTP4A1-203ENST00000473334 DVL2O14641 736 aa20.44■□□□□ 0.86
PTP4A1-203ENST00000473334 KCNK2O95069 426 aa20.44■□□□□ 0.86
PTP4A1-203ENST00000473334 TCEA1P23193 301 aaKnown RBP20.44■□□□□ 0.86
PTP4A1-203ENST00000473334 LHX2P50458 406 aa20.44■□□□□ 0.86
PTP4A1-203ENST00000473334 DIO3P55073 304 aa20.44■□□□□ 0.86
PTP4A1-203ENST00000473334 CLDN8P56748 225 aa20.44■□□□□ 0.86
PTP4A1-203ENST00000473334 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.44■□□□□ 0.86
PTP4A1-203ENST00000473334 LSM12Q3MHD2 195 aaKnown RBP20.44■□□□□ 0.86
PTP4A1-203ENST00000473334 EXOSC6Q5RKV6 272 aaKnown RBP20.44■□□□□ 0.86
PTP4A1-203ENST00000473334 DMRTC2Q8IXT2 367 aaPredicted RBP20.44■□□□□ 0.86
PTP4A1-203ENST00000473334 COX18Q8N8Q8 333 aa20.44■□□□□ 0.86
PTP4A1-203ENST00000473334 RELL2Q8NC24 303 aaPredicted RBP20.44■□□□□ 0.86
PTP4A1-203ENST00000473334 FAM110BQ8TC76 370 aa20.44■□□□□ 0.86
PTP4A1-203ENST00000473334 NUDT8Q8WV74 236 aa20.44■□□□□ 0.86
PTP4A1-203ENST00000473334 JADE3Q92613 823 aa20.44■□□□□ 0.86
PTP4A1-203ENST00000473334 TUBA1CQ9BQE3 449 aa20.44■□□□□ 0.86
PTP4A1-203ENST00000473334 YIPF4Q9BSR8 244 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms