RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 PHF21BQ96EK2 531 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 HS6ST2Q96MM7 605 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 HBEGFQ99075 208 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 RHNO1Q9BSD3 238 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 PLA2G12AQ9BZM1 189 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 SLCO5A1Q9H2Y9 848 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 FOLH1BQ9HBA9 442 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 CPSF2Q9P2I0 782 aaKnown RBP8.34□□□□□ -1.07
VCL-204ENST00000472585 TXNDC16Q9P2K2 825 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 RNF14Q9UBS8 474 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 DKKL1Q9UK85 242 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 PCTPQ9UKL6 214 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 PROCRQ9UNN8 238 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 CFL2Q9Y281 166 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 ZNF175Q9Y473 711 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 DYSFO75923 2080 aa8.34□□□□□ -1.07
VCL-204ENST00000472585 A0A096LNT2 108 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 SYCE1LA8MT33 242 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 SCO2O43819 266 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 ADAM11O75078 769 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 KLHL2O95198 593 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 CD8AP01732 235 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 OPN1LWP04000 364 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 SBK3P0C264 359 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 PPP3CBP16298 524 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 TCP1P17987 556 aaKnown RBP8.33□□□□□ -1.08
VCL-204ENST00000472585 SRD5A1P18405 259 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 DEKP35659 375 aaKnown RBP8.33□□□□□ -1.08
VCL-204ENST00000472585 CDKN1AP38936 164 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 ALDH9A1P49189 494 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 PHEXP78562 749 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 SRSF2Q01130 221 aaKnown RBP8.33□□□□□ -1.08
VCL-204ENST00000472585 TSC22D1Q15714 1073 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 TECRLQ5HYJ1 363 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 RAET1LQ5VY80 246 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 MFSD12Q6NUT3 480 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 LETMD1Q6P1Q0 360 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 ZDHHC24Q6UX98 284 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 ALPK2Q86TB3 2170 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 MARCH3Q86UD3 253 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 WFDC8Q8IUA0 241 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 SLC44A2Q8IWA5 706 aaPredicted RBP8.33□□□□□ -1.08
VCL-204ENST00000472585 TMEM151AQ8N4L1 468 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 C1orf52Q8N6N3 182 aaKnown RBP8.33□□□□□ -1.08
VCL-204ENST00000472585 METTL25Q8N6Q8 603 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 DUSP19Q8WTR2 217 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 MRRFQ96E11 262 aaKnown RBP8.33□□□□□ -1.08
VCL-204ENST00000472585 DTNBP1Q96EV8 351 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 ERP44Q9BS26 406 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 KCNF1Q9H3M0 494 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 BARX1Q9HBU1 254 aaPredicted RBP8.33□□□□□ -1.08
VCL-204ENST00000472585 TMEM160Q9NX00 188 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 PRODH2Q9UF12 536 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 SLC12A4Q9UP95 1085 aa8.33□□□□□ -1.08
VCL-204ENST00000472585 A0A096LPK6 155 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 GOLGA6L10A6NI86 522 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 H3BML4 177 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 UBFD1O14562 309 aaKnown RBP8.32□□□□□ -1.08
VCL-204ENST00000472585 EIF3HO15372 352 aaKnown RBP eCLIP8.32□□□□□ -1.08
VCL-204ENST00000472585 RAD51CO43502 376 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 IGHV4-39P01824 125 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 IL3P08700 152 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 IL11P20809 199 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 EVI2BP34910 448 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 MAGEA4P43358 317 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 CCNG1P51959 295 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 CASP9P55211 416 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 CDH13P55290 713 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 STX5Q13190 355 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 FGFBP1Q14512 234 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 FAM83EQ2M2I3 478 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 PGGHGQ32M88 737 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 C6orf163Q5TEZ5 329 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 BHLHB9Q6PI77 547 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 SEZ6L2Q6UXD5 910 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 PAGE2Q7Z2X7 111 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 TRIM46Q7Z4K8 759 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 OR4K17Q8NGC6 315 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 UHMK1Q8TAS1 419 aaKnown RBP8.32□□□□□ -1.08
VCL-204ENST00000472585 FBXW5Q969U6 566 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 ATP6V1E2Q96A05 226 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 C1GALT1C1Q96EU7 318 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 ADGRG7Q96K78 797 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 FANCFQ9NPI8 374 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 AHSPQ9NZD4 102 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 PPP4R1LQ9P1A2 415 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 WHRNQ9P202 907 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 GDF2Q9UK05 429 aaPredicted RBP8.32□□□□□ -1.08
VCL-204ENST00000472585 UTS2RQ9UKP6 389 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 LIPT1Q9Y234 373 aa8.32□□□□□ -1.08
VCL-204ENST00000472585 TNPO3Q9Y5L0 923 aaKnown RBP8.32□□□□□ -1.08
VCL-204ENST00000472585 MGAM2Q2M2H8 2515 aa8.31□□□□□ -1.08
VCL-204ENST00000472585 A0A1W2PP18 115 aa8.31□□□□□ -1.08
VCL-204ENST00000472585 CCDC188H7C350 402 aa8.31□□□□□ -1.08
VCL-204ENST00000472585 GMFGO60234 142 aa8.31□□□□□ -1.08
VCL-204ENST00000472585 DLX3O60479 287 aa8.31□□□□□ -1.08
VCL-204ENST00000472585 PLOD3O60568 738 aa8.31□□□□□ -1.08
VCL-204ENST00000472585 SS18L1O75177 396 aaPredicted RBP8.31□□□□□ -1.08
VCL-204ENST00000472585 GCM2O75603 506 aaPredicted RBP8.31□□□□□ -1.08
VCL-204ENST00000472585 IGKV1D-16P01601 117 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms