RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 A8MXE2 369 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 SEC14L5O43304 696 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 UTS2O95399 124 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 CGAP01215 116 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 C1QCP02747 245 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 ENO1P06733 434 aaKnown RBP7.28□□□□□ -1.24
USP48-207ENST00000471752 GSTA1P08263 222 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 ACP2P11117 423 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 CPA3P15088 417 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 LOXP28300 417 aaPredicted RBP7.28□□□□□ -1.24
USP48-207ENST00000471752 CCKARP32238 428 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 EVI2BP34910 448 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 MPIP34949 423 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 OPRM1P35372 400 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 MAP3K8P41279 467 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 PNLIPRP2P54317 469 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 PRKAG1P54619 331 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 RIPPLY3P57055 190 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 SIRPAP78324 504 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 HEPACAMQ14CZ8 416 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 PCLAFQ15004 111 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 SPIN4Q56A73 249 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 CCNJQ5T5M9 372 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 LGSNQ5TDP6 509 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 ZCCHC23Q6ZST2 131 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 ZNF550Q7Z398 422 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 IFNEQ86WN2 208 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 SLC22A9Q8IVM8 553 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 PM20D2Q8IYS1 436 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 FAM9CQ8IZT9 166 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 OR2L13Q8N349 312 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 ZNF610Q8N9Z0 462 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 GATSQ8NAP1 163 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 SLC16A11Q8NCK7 471 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 FNDC9Q8TBE3 224 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 ACMSDQ8TDX5 336 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 SLC9A6Q92581 669 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 TMCO6Q96DC7 493 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 POM121Q96HA1 1249 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 TSSK3Q96PN8 268 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 UCN2Q96RP3 112 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 FOXC2Q99958 501 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 MYNNQ9NPC7 610 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 NMRK1Q9NWW6 199 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 KLHL28Q9NXS3 571 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 TAS2R7Q9NYW3 318 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 DCDC2Q9UHG0 476 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 DKKL1Q9UK85 242 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 CFL2Q9Y281 166 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 OR10H1Q9Y4A9 318 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 COL6A5A8TX70 2615 aa7.28□□□□□ -1.24
USP48-207ENST00000471752 USF3Q68DE3 2245 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 NPIPA5A0A0B4J1W7 369 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 TLDC2A0PJX2 215 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 DEFB108AA8MXU0 73 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 NPIPA7E9PJI5 369 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 HCRTR2O43614 444 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 SPAG7O75391 227 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 IL33O95760 270 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 IL18BPO95998 194 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 THBDP07204 575 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 NPIPA8P0DM63 369 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 LAMP1P11279 417 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 CD1EP15812 388 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 SDC1P18827 310 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 KRT4P19013 534 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 CD53P19397 219 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 SHC1P29353 583 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 IL12BP29460 328 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 ALDH3A1P30838 453 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 CRHR1P34998 444 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 DNAJB13P59910 316 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 RPP38P78345 283 aaKnown RBP7.27□□□□□ -1.25
USP48-207ENST00000471752 SLC18A2Q05940 514 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 ZNF763Q0D2J5 394 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 HSPB3Q12988 150 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 ERCC6LQ2NKX8 1250 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 TMEM44Q2T9K0 475 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 EXOSC6Q5RKV6 272 aaKnown RBP7.27□□□□□ -1.25
USP48-207ENST00000471752 FIGNL1Q6PIW4 674 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 GGNQ86UU5 652 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 CLEC4FQ8N1N0 589 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 CIARTQ8N365 385 aaPredicted RBP7.27□□□□□ -1.25
USP48-207ENST00000471752 KRTCAP2Q8N6L1 136 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 CEP112Q8N8E3 955 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 CNEP1R1Q8N9A8 125 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 OR7A2PQ8NGA2 310 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 OR4K17Q8NGC6 315 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 KIF18AQ8NI77 898 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 POC1BQ8TC44 478 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 AGR3Q8TD06 166 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 UBLCP1Q8WVY7 318 aaPredicted RBP7.27□□□□□ -1.25
USP48-207ENST00000471752 SMPDL3BQ92485 455 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 C1GALT1C1Q96EU7 318 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 RMND5BQ96G75 393 aaPredicted RBP7.27□□□□□ -1.25
USP48-207ENST00000471752 MARK4Q96L34 752 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 LMF2Q9BU23 707 aaKnown RBP7.27□□□□□ -1.25
USP48-207ENST00000471752 PINK1Q9BXM7 581 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 TMEM185BQ9H7F4 350 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 ANKZF1Q9H8Y5 726 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms