RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 FAM222BQ8WU58 562 aa17.07■□□□□ 0.32
COMMD1-207ENST00000471704 PIK3R3Q92569 461 aa17.07■□□□□ 0.32
COMMD1-207ENST00000471704 TRIB1Q96RU8 372 aa17.07■□□□□ 0.32
COMMD1-207ENST00000471704 C20orf27Q9GZN8 174 aa17.07■□□□□ 0.32
COMMD1-207ENST00000471704 CXXC4Q9H2H0 198 aa17.07■□□□□ 0.32
COMMD1-207ENST00000471704 EQTNQ9NQ60 294 aa17.07■□□□□ 0.32
COMMD1-207ENST00000471704 RASSF1Q9NS23 344 aa17.07■□□□□ 0.32
COMMD1-207ENST00000471704 TAS2R10Q9NYW0 307 aa17.07■□□□□ 0.32
COMMD1-207ENST00000471704 JKAMPQ9P055 326 aa17.07■□□□□ 0.32
COMMD1-207ENST00000471704 SH3BP4Q9P0V3 963 aa17.07■□□□□ 0.32
COMMD1-207ENST00000471704 NTMQ9P121 344 aa17.07■□□□□ 0.32
COMMD1-207ENST00000471704 FOXD3Q9UJU5 478 aaPredicted RBP17.07■□□□□ 0.32
COMMD1-207ENST00000471704 ACANP16112 2415 aa17.07■□□□□ 0.32
COMMD1-207ENST00000471704 SCAMP2O15127 329 aaKnown RBP17.06■□□□□ 0.32
COMMD1-207ENST00000471704 IL33O95760 270 aa17.06■□□□□ 0.32
COMMD1-207ENST00000471704 IL18BPO95998 194 aa17.06■□□□□ 0.32
COMMD1-207ENST00000471704 ACP2P11117 423 aa17.06■□□□□ 0.32
COMMD1-207ENST00000471704 PRPS2P11908 318 aa17.06■□□□□ 0.32
COMMD1-207ENST00000471704 SERPINB4P48594 390 aa17.06■□□□□ 0.32
COMMD1-207ENST00000471704 STARP49675 285 aa17.06■□□□□ 0.32
COMMD1-207ENST00000471704 LHX2P50458 406 aa17.06■□□□□ 0.32
COMMD1-207ENST00000471704 B3GALT5-AS1P59052 145 aa17.06■□□□□ 0.32
COMMD1-207ENST00000471704 PTGR1Q14914 329 aa17.06■□□□□ 0.32
COMMD1-207ENST00000471704 DAZAP2Q15038 168 aaPredicted RBP17.06■□□□□ 0.32
COMMD1-207ENST00000471704 FLYWCH1Q4VC44 716 aa17.06■□□□□ 0.32
COMMD1-207ENST00000471704 C6orf136Q5SQH8 315 aa17.06■□□□□ 0.32
COMMD1-207ENST00000471704 APOOLQ6UXV4 268 aa17.06■□□□□ 0.32
COMMD1-207ENST00000471704 ADGRE4PQ86SQ3 457 aa17.06■□□□□ 0.32
COMMD1-207ENST00000471704 IFNEQ86WN2 208 aa17.06■□□□□ 0.32
COMMD1-207ENST00000471704 TRIM42Q8IWZ5 723 aa17.06■□□□□ 0.32
COMMD1-207ENST00000471704 OR2M3Q8NG83 312 aa17.06■□□□□ 0.32
COMMD1-207ENST00000471704 OR7A2PQ8NGA2 310 aa17.06■□□□□ 0.32
COMMD1-207ENST00000471704 NINJ1Q92982 152 aa17.06■□□□□ 0.32
COMMD1-207ENST00000471704 MTERF3Q96E29 417 aa17.06■□□□□ 0.32
COMMD1-207ENST00000471704 LRRC46Q96FV0 321 aa17.06■□□□□ 0.32
COMMD1-207ENST00000471704 PPP3R2Q96LZ3 170 aa17.06■□□□□ 0.32
COMMD1-207ENST00000471704 ZIM3Q96PE6 472 aa17.06■□□□□ 0.32
COMMD1-207ENST00000471704 TUBA1CQ9BQE3 449 aa17.06■□□□□ 0.32
COMMD1-207ENST00000471704 GPATCH1Q9BRR8 931 aaKnown RBP17.06■□□□□ 0.32
COMMD1-207ENST00000471704 C1orf50Q9BV19 199 aa17.06■□□□□ 0.32
COMMD1-207ENST00000471704 POLDIP3Q9BY77 421 aaKnown RBP17.06■□□□□ 0.32
COMMD1-207ENST00000471704 Q9N2J8 555 aa17.06■□□□□ 0.32
COMMD1-207ENST00000471704 SIRT3Q9NTG7 399 aaPredicted RBP17.06■□□□□ 0.32
COMMD1-207ENST00000471704 ACSS1Q9NUB1 689 aaPredicted RBP17.06■□□□□ 0.32
COMMD1-207ENST00000471704 ATP6V1HQ9UI12 483 aa17.06■□□□□ 0.32
COMMD1-207ENST00000471704 MRPS18CQ9Y3D5 142 aaKnown RBP17.06■□□□□ 0.32
COMMD1-207ENST00000471704 ZNF469Q96JG9 3925 aaPredicted RBP17.06■□□□□ 0.32
COMMD1-207ENST00000471704 A6NNC1 897 aa17.05■□□□□ 0.32
COMMD1-207ENST00000471704 CTIFO43310 598 aaKnown RBP17.05■□□□□ 0.32
COMMD1-207ENST00000471704 NKX2-2O95096 273 aa17.05■□□□□ 0.32
COMMD1-207ENST00000471704 DHRS4L1P0CG22 281 aa17.05■□□□□ 0.32
COMMD1-207ENST00000471704 TCEA1P23193 301 aaKnown RBP17.05■□□□□ 0.32
COMMD1-207ENST00000471704 CTSSP25774 331 aa17.05■□□□□ 0.32
COMMD1-207ENST00000471704 GABRA3P34903 492 aa17.05■□□□□ 0.32
COMMD1-207ENST00000471704 GPC1P35052 558 aa17.05■□□□□ 0.32
COMMD1-207ENST00000471704 ASMTP46597 345 aa17.05■□□□□ 0.32
COMMD1-207ENST00000471704 MANFP55145 182 aaKnown RBP17.05■□□□□ 0.32
COMMD1-207ENST00000471704 MPP2Q14168 576 aa17.05■□□□□ 0.32
COMMD1-207ENST00000471704 DECR1Q16698 335 aa17.05■□□□□ 0.32
COMMD1-207ENST00000471704 EXOSC6Q5RKV6 272 aaKnown RBP17.05■□□□□ 0.32
COMMD1-207ENST00000471704 C9orf106Q8NAJ2 232 aa17.05■□□□□ 0.32
COMMD1-207ENST00000471704 NUP43Q8NFH3 380 aa17.05■□□□□ 0.32
COMMD1-207ENST00000471704 ZFP28Q8NHY6 868 aa17.05■□□□□ 0.32
COMMD1-207ENST00000471704 FBXO30Q8TB52 745 aa17.05■□□□□ 0.32
COMMD1-207ENST00000471704 ZBED6CLQ96FA7 236 aaPredicted RBP17.05■□□□□ 0.32
COMMD1-207ENST00000471704 UCN2Q96RP3 112 aa17.05■□□□□ 0.32
COMMD1-207ENST00000471704 FOXC2Q99958 501 aa17.05■□□□□ 0.32
COMMD1-207ENST00000471704 CLEC4MQ9H2X3 399 aaPredicted RBP17.05■□□□□ 0.32
COMMD1-207ENST00000471704 LIME1Q9H400 295 aa17.05■□□□□ 0.32
COMMD1-207ENST00000471704 DSN1Q9H410 356 aa17.05■□□□□ 0.32
COMMD1-207ENST00000471704 ST6GALNAC2Q9UJ37 374 aa17.05■□□□□ 0.32
COMMD1-207ENST00000471704 ABCG2Q9UNQ0 655 aa17.05■□□□□ 0.32
COMMD1-207ENST00000471704 NIPBLQ6KC79 2804 aaeCLIP17.05■□□□□ 0.32
COMMD1-207ENST00000471704 WDR91A4D1P6 747 aa17.04■□□□□ 0.32
COMMD1-207ENST00000471704 ESPNB1AK53 854 aa17.04■□□□□ 0.32
COMMD1-207ENST00000471704 RGS16O15492 202 aaPredicted RBP17.04■□□□□ 0.32
COMMD1-207ENST00000471704 LAMP1P11279 417 aa17.04■□□□□ 0.32
COMMD1-207ENST00000471704 DPP4P27487 766 aa17.04■□□□□ 0.32
COMMD1-207ENST00000471704 OPRM1P35372 400 aa17.04■□□□□ 0.32
COMMD1-207ENST00000471704 RFX3P48380 749 aa17.04■□□□□ 0.32
COMMD1-207ENST00000471704 PRKAG1P54619 331 aa17.04■□□□□ 0.32
COMMD1-207ENST00000471704 CLDN18P56856 261 aa17.04■□□□□ 0.32
COMMD1-207ENST00000471704 MRPS22P82650 360 aaKnown RBP17.04■□□□□ 0.32
COMMD1-207ENST00000471704 ZNHIT3Q15649 155 aaPredicted RBP17.04■□□□□ 0.32
COMMD1-207ENST00000471704 GRAMD1BQ3KR37 738 aa17.04■□□□□ 0.32
COMMD1-207ENST00000471704 ZAR1Q86SH2 424 aa17.04■□□□□ 0.32
COMMD1-207ENST00000471704 GALNT10Q86SR1 603 aa17.04■□□□□ 0.32
COMMD1-207ENST00000471704 MARCH3Q86UD3 253 aa17.04■□□□□ 0.32
COMMD1-207ENST00000471704 NUDCD3Q8IVD9 361 aa17.04■□□□□ 0.32
COMMD1-207ENST00000471704 OTUB1Q96FW1 271 aaPredicted RBP17.04■□□□□ 0.32
COMMD1-207ENST00000471704 RMND5BQ96G75 393 aaPredicted RBP17.04■□□□□ 0.32
COMMD1-207ENST00000471704 C16orf58Q96GQ5 468 aa17.04■□□□□ 0.32
COMMD1-207ENST00000471704 MS4A4EQ96PG1 132 aa17.04■□□□□ 0.32
COMMD1-207ENST00000471704 SSU72Q9NP77 194 aaKnown RBP17.04■□□□□ 0.32
COMMD1-207ENST00000471704 FAM120CQ9NX05 1096 aaKnown RBP17.04■□□□□ 0.32
COMMD1-207ENST00000471704 MED11Q9P086 117 aa17.04■□□□□ 0.32
COMMD1-207ENST00000471704 PPP4R1LQ9P1A2 415 aa17.04■□□□□ 0.32
COMMD1-207ENST00000471704 DKKL1Q9UK85 242 aa17.04■□□□□ 0.32
COMMD1-207ENST00000471704 RPH3AQ9Y2J0 694 aaPredicted RBP17.04■□□□□ 0.32
COMMD1-207ENST00000471704 TMEM114B3SHH9 223 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms