RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 FAM173AQ9BQD7 235 aa5.52□□□□□ -1.53
SMC5-202ENST00000471372 SLC30A2Q9BRI3 323 aa5.52□□□□□ -1.53
SMC5-202ENST00000471372 CABLES2Q9BTV7 478 aa5.52□□□□□ -1.53
SMC5-202ENST00000471372 RBM4Q9BWF3 364 aaKnown RBP5.52□□□□□ -1.53
SMC5-202ENST00000471372 RNF41Q9H4P4 317 aaPredicted RBP5.52□□□□□ -1.53
SMC5-202ENST00000471372 ZNF446Q9NWS9 450 aa5.52□□□□□ -1.53
SMC5-202ENST00000471372 MRPL39Q9NYK5 338 aaKnown RBP5.52□□□□□ -1.53
SMC5-202ENST00000471372 PCSK1NQ9UHG2 260 aa5.52□□□□□ -1.53
SMC5-202ENST00000471372 MEMO1Q9Y316 297 aa5.52□□□□□ -1.53
SMC5-202ENST00000471372 METP08581 1390 aa5.52□□□□□ -1.53
SMC5-202ENST00000471372 SCN5AQ14524 2016 aa5.52□□□□□ -1.53
SMC5-202ENST00000471372 IGKV2D-30A0A075B6S6 120 aa5.51□□□□□ -1.53
SMC5-202ENST00000471372 ARHGEF33A8MVX0 844 aa5.51□□□□□ -1.53
SMC5-202ENST00000471372 FAM72CH0Y354 149 aa5.51□□□□□ -1.53
SMC5-202ENST00000471372 K7EQG2 157 aa5.51□□□□□ -1.53
SMC5-202ENST00000471372 SRPX2O60687 465 aaPredicted RBP5.51□□□□□ -1.53
SMC5-202ENST00000471372 TPST2O60704 377 aa5.51□□□□□ -1.53
SMC5-202ENST00000471372 F10P00742 488 aa5.51□□□□□ -1.53
SMC5-202ENST00000471372 DBTP11182 482 aaKnown RBP5.51□□□□□ -1.53
SMC5-202ENST00000471372 CCR1P32246 355 aa5.51□□□□□ -1.53
SMC5-202ENST00000471372 CASP4P49662 377 aa5.51□□□□□ -1.53
SMC5-202ENST00000471372 NOVA1P51513 510 aaKnown RBP5.51□□□□□ -1.53
SMC5-202ENST00000471372 SEC61GP60059 68 aa5.51□□□□□ -1.53
SMC5-202ENST00000471372 RPS6P62753 249 aaKnown RBP5.51□□□□□ -1.53
SMC5-202ENST00000471372 RGS1Q08116 209 aa5.51□□□□□ -1.53
SMC5-202ENST00000471372 MXD4Q14582 209 aaPredicted RBP5.51□□□□□ -1.53
SMC5-202ENST00000471372 MTHFSDQ2M296 383 aaKnown RBP5.51□□□□□ -1.53
SMC5-202ENST00000471372 FAM72AQ5TYM5 149 aa5.51□□□□□ -1.53
SMC5-202ENST00000471372 FAM72DQ6L9T8 149 aa5.51□□□□□ -1.53
SMC5-202ENST00000471372 SCYL2Q6P3W7 929 aa5.51□□□□□ -1.53
SMC5-202ENST00000471372 APOOLQ6UXV4 268 aa5.51□□□□□ -1.53
SMC5-202ENST00000471372 FAM72BQ86X60 149 aa5.51□□□□□ -1.53
SMC5-202ENST00000471372 DCUN1D3Q8IWE4 304 aa5.51□□□□□ -1.53
SMC5-202ENST00000471372 CLDN19Q8N6F1 224 aa5.51□□□□□ -1.53
SMC5-202ENST00000471372 ZNF491Q8N8L2 437 aa5.51□□□□□ -1.53
SMC5-202ENST00000471372 Q8N9P0 234 aaPredicted RBP5.51□□□□□ -1.53
SMC5-202ENST00000471372 OR1B1Q8NGR6 318 aa5.51□□□□□ -1.53
SMC5-202ENST00000471372 OR1F12Q8NHA8 337 aa5.51□□□□□ -1.53
SMC5-202ENST00000471372 SSC4DQ8WTU2 575 aa5.51□□□□□ -1.53
SMC5-202ENST00000471372 C12orf66Q96MD2 445 aa5.51□□□□□ -1.53
SMC5-202ENST00000471372 PLIN2Q99541 437 aa5.51□□□□□ -1.53
SMC5-202ENST00000471372 ROPN1BQ9BZX4 212 aaPredicted RBP5.51□□□□□ -1.53
SMC5-202ENST00000471372 SGK2Q9HBY8 427 aa5.51□□□□□ -1.53
SMC5-202ENST00000471372 CYTH4Q9UIA0 394 aa5.51□□□□□ -1.53
SMC5-202ENST00000471372 MPTX1A8MV57 137 aa5.5□□□□□ -1.53
SMC5-202ENST00000471372 DUS4LO95620 317 aaKnown RBP5.5□□□□□ -1.53
SMC5-202ENST00000471372 CA1P00915 261 aaPredicted RBP5.5□□□□□ -1.53
SMC5-202ENST00000471372 SP1P08047 785 aa5.5□□□□□ -1.53
SMC5-202ENST00000471372 FCGR3AP08637 254 aa5.5□□□□□ -1.53
SMC5-202ENST00000471372 ZSCAN5DPP0CG00 497 aa5.5□□□□□ -1.53
SMC5-202ENST00000471372 H2AFXP16104 143 aaPredicted RBP5.5□□□□□ -1.53
SMC5-202ENST00000471372 PGCP20142 388 aa5.5□□□□□ -1.53
SMC5-202ENST00000471372 RPL4P36578 427 aaKnown RBP5.5□□□□□ -1.53
SMC5-202ENST00000471372 MAGEA8P43361 318 aa5.5□□□□□ -1.53
SMC5-202ENST00000471372 FNTAP49354 379 aa5.5□□□□□ -1.53
SMC5-202ENST00000471372 SUCLG1P53597 346 aaKnown RBP5.5□□□□□ -1.53
SMC5-202ENST00000471372 PLOD1Q02809 727 aaPredicted RBP5.5□□□□□ -1.53
SMC5-202ENST00000471372 ZNF33BQ06732 778 aa5.5□□□□□ -1.53
SMC5-202ENST00000471372 ACER2Q5QJU3 275 aa5.5□□□□□ -1.53
SMC5-202ENST00000471372 ATL3Q6DD88 541 aa5.5□□□□□ -1.53
SMC5-202ENST00000471372 FAM71F2Q6NXP2 309 aa5.5□□□□□ -1.53
SMC5-202ENST00000471372 CCBE1Q6UXH8 406 aaPredicted RBP5.5□□□□□ -1.53
SMC5-202ENST00000471372 TTC5Q8N0Z6 440 aa5.5□□□□□ -1.53
SMC5-202ENST00000471372 LINC01561Q8N1V8 128 aa5.5□□□□□ -1.53
SMC5-202ENST00000471372 UBE2J2Q8N2K1 259 aa5.5□□□□□ -1.53
SMC5-202ENST00000471372 AQP11Q8NBQ7 271 aa5.5□□□□□ -1.53
SMC5-202ENST00000471372 TBCKQ8TEA7 893 aa5.5□□□□□ -1.53
SMC5-202ENST00000471372 PGLYRP2Q96PD5 576 aa5.5□□□□□ -1.53
SMC5-202ENST00000471372 FEM1AQ9BSK4 669 aa5.5□□□□□ -1.53
SMC5-202ENST00000471372 IKZF5Q9H5V7 419 aa5.5□□□□□ -1.53
SMC5-202ENST00000471372 ZDHHC18Q9NUE0 388 aa5.5□□□□□ -1.53
SMC5-202ENST00000471372 DDX18Q9NVP1 670 aaKnown RBP5.5□□□□□ -1.53
SMC5-202ENST00000471372 THAP10Q9P2Z0 257 aaPredicted RBP5.5□□□□□ -1.53
SMC5-202ENST00000471372 SEC14L3Q9UDX4 400 aa5.5□□□□□ -1.53
SMC5-202ENST00000471372 CACNG5Q9UF02 275 aa5.5□□□□□ -1.53
SMC5-202ENST00000471372 CAB39Q9Y376 341 aaPredicted RBP5.5□□□□□ -1.53
SMC5-202ENST00000471372 SALL1Q9NSC2 1324 aa5.49□□□□□ -1.53
SMC5-202ENST00000471372 TRGV8A0A0C4DH27 118 aa5.49□□□□□ -1.53
SMC5-202ENST00000471372 FAM240BA0A1B0GVZ2 78 aa5.49□□□□□ -1.53
SMC5-202ENST00000471372 PCP4L1A6NKN8 68 aa5.49□□□□□ -1.53
SMC5-202ENST00000471372 TRAFD1O14545 582 aaPredicted RBP5.49□□□□□ -1.53
SMC5-202ENST00000471372 OR7A17O14581 309 aa5.49□□□□□ -1.53
SMC5-202ENST00000471372 ZFAND5O76080 213 aa5.49□□□□□ -1.53
SMC5-202ENST00000471372 IGHG3P01860 377 aa5.49□□□□□ -1.53
SMC5-202ENST00000471372 IGFBP1P08833 259 aaPredicted RBP5.49□□□□□ -1.53
SMC5-202ENST00000471372 WNT2P09544 360 aa5.49□□□□□ -1.53
SMC5-202ENST00000471372 CCT3P49368 545 aaKnown RBP5.49□□□□□ -1.53
SMC5-202ENST00000471372 PLD1Q13393 1074 aa5.49□□□□□ -1.53
SMC5-202ENST00000471372 GANABQ14697 944 aaKnown RBP5.49□□□□□ -1.53
SMC5-202ENST00000471372 PDZK1Q5T2W1 519 aa5.49□□□□□ -1.53
SMC5-202ENST00000471372 METAP1DQ6UB28 335 aaPredicted RBP5.49□□□□□ -1.53
SMC5-202ENST00000471372 GDPGP1Q6ZNW5 385 aa5.49□□□□□ -1.53
SMC5-202ENST00000471372 STOX1Q6ZVD7 989 aa5.49□□□□□ -1.53
SMC5-202ENST00000471372 CCDC80Q76M96 950 aa5.49□□□□□ -1.53
SMC5-202ENST00000471372 NLRP9Q7RTR0 991 aa5.49□□□□□ -1.53
SMC5-202ENST00000471372 TRPM8Q7Z2W7 1104 aa5.49□□□□□ -1.53
SMC5-202ENST00000471372 NOTCH2NLQ7Z3S9 236 aa5.49□□□□□ -1.53
SMC5-202ENST00000471372 CLEC4FQ8N1N0 589 aa5.49□□□□□ -1.53
SMC5-202ENST00000471372 RASD2Q96D21 266 aa5.49□□□□□ -1.53
SMC5-202ENST00000471372 SDSLQ96GA7 329 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms