RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 KRT20P35900 424 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 ADH7P40394 386 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 PTGDSP41222 190 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 SLC1A6P48664 564 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 PNLIPRP2P54317 469 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 RCN1Q15293 331 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 TOMM20Q15388 145 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 ACSF3Q4G176 576 aaPredicted RBP12.31□□□□□ -0.44
HMGN1-211ENST00000471260 CT45A2Q5DJT8 189 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 CES4AQ5XG92 561 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 FAM219BQ5XKK7 198 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 NSUN5P2Q63ZY6 315 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 FAM71E1Q6IPT2 247 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 SCIMPQ6UWF3 145 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 ANGPTL8Q6UXH0 198 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 KIRREL3Q8IZU9 778 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 KAT2AQ92830 837 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 ABTB1Q969K4 478 aaPredicted RBP12.31□□□□□ -0.44
HMGN1-211ENST00000471260 TMBIM1Q969X1 311 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 LRRC46Q96FV0 321 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 EBPLQ9BY08 206 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 VCX3BQ9H321 246 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 NKX1-2Q9UD57 310 aaPredicted RBP12.31□□□□□ -0.44
HMGN1-211ENST00000471260 MRPS18CQ9Y3D5 142 aaKnown RBP12.31□□□□□ -0.44
HMGN1-211ENST00000471260 ARHGAP21Q5T5U3 1957 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 GOLGA8QA0A0J9YX86 632 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 GOLGA8OA6NCC3 632 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 CD8B2A6NJW9 211 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 GOLGA8NF8WBI6 632 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 SLCO1B7G3V0H7 640 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 SLC28A1O00337 649 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 DVL2O14641 736 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 GNB5O14775 395 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 TSPAN2O60636 221 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 ENTPD5O75356 428 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 SMNDC1O75940 238 aaKnown RBP eCLIP12.3□□□□□ -0.442e-7■■■□□ 16.5
HMGN1-211ENST00000471260 IL2RAP01589 272 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 RPSAP08865 295 aaKnown RBP12.3□□□□□ -0.44
HMGN1-211ENST00000471260 CPN1P15169 458 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 BMP7P18075 431 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 NTSP30990 170 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 SERPINB5P36952 375 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 ACTR3P61158 418 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 ABCE1P61221 599 aaKnown RBP12.3□□□□□ -0.44
HMGN1-211ENST00000471260 KIAA0040Q15053 153 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 EIPR1Q53HC9 387 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 NOXRED1Q6NXP6 359 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 LRRC74BQ6ZQY2 392 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 RINLQ6ZS11 566 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 SEM1Q6ZVN7 128 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 LIX1LQ8IVB5 337 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 FAM83FQ8NEG4 500 aaPredicted RBP12.3□□□□□ -0.44
HMGN1-211ENST00000471260 OR7G2Q8NG99 324 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 ZPLD1Q8TCW7 415 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 RNF138Q8WVD3 245 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 CMTM5Q96DZ9 223 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 ZNF764Q96H86 408 aaPredicted RBP12.3□□□□□ -0.44
HMGN1-211ENST00000471260 WDYHV1Q96HA8 205 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 CALHM2Q9HA72 323 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 FOLH1BQ9HBA9 442 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 FOXD3Q9UJU5 478 aaPredicted RBP12.3□□□□□ -0.44
HMGN1-211ENST00000471260 CCL27Q9Y4X3 112 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 CSMD2Q7Z408 3487 aa12.3□□□□□ -0.44
HMGN1-211ENST00000471260 LRBAP50851 2863 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 FBN2P35556 2912 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 TTC36A6NLP5 189 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 B2RBV5 119 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 SYT5O00445 386 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 RGS14O43566 566 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 TRIM13O60858 407 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 CHEK2O96017 543 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 IL12BP29460 328 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 SRD5A2P31213 254 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 NCBP2P52298 156 aaKnown RBP eCLIP12.29□□□□□ -0.44
HMGN1-211ENST00000471260 PSG6Q00889 435 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 RCAN2Q14206 197 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 KPNB1Q14974 876 aaKnown RBP12.29□□□□□ -0.44
HMGN1-211ENST00000471260 FBXL19-AS1Q494R0 122 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 CYP27C1Q4G0S4 372 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 WIPI1Q5MNZ9 446 aaPredicted RBP12.29□□□□□ -0.44
HMGN1-211ENST00000471260 ENPP6Q6UWR7 440 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 WDR53Q7Z5U6 358 aaPredicted RBP12.29□□□□□ -0.44
HMGN1-211ENST00000471260 PLCZ1Q86YW0 608 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 TREML1Q86YW5 311 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 OR2L13Q8N349 312 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 WDSUB1Q8N9V3 476 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 RBM15BQ8NDT2 890 aaKnown RBP12.29□□□□□ -0.44
HMGN1-211ENST00000471260 ADOQ96SZ5 270 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 ZNF559Q9BR84 538 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 UGT2B28Q9BY64 529 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 OR2B2Q9GZK3 357 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 VCXQ9H320 206 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 GALNT9Q9HCQ5 603 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 C1orf109Q9NX04 203 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 C19orf53Q9UNZ5 99 aaPredicted RBP12.29□□□□□ -0.44
HMGN1-211ENST00000471260 SLC6A5Q9Y345 797 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 TMED5Q9Y3A6 229 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 POLR3HQ9Y535 204 aaPredicted RBP12.29□□□□□ -0.44
HMGN1-211ENST00000471260 WIF1Q9Y5W5 379 aa12.29□□□□□ -0.44
HMGN1-211ENST00000471260 MBD3L4A6NDZ8 208 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms