RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ZNF556Q9HAH1 456 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 POLE3Q9NRF9 147 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 PRODH2Q9UF12 536 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 PCDHGA8Q9Y5G5 932 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 GPR179Q6PRD1 2367 aa16.82■□□□□ 0.28
SMC4-211ENST00000469858 SMNDC1O75940 238 aaKnown RBP eCLIP16.81■□□□□ 0.282e-16■■■■■ 67.6
SMC4-211ENST00000469858 IGKV1D-16P01601 117 aa16.81■□□□□ 0.28
SMC4-211ENST00000469858 CT45A8P0DMV1 189 aa16.81■□□□□ 0.28
SMC4-211ENST00000469858 CT45A9P0DMV2 189 aa16.81■□□□□ 0.28
SMC4-211ENST00000469858 NID1P14543 1247 aa16.81■□□□□ 0.28
SMC4-211ENST00000469858 ELK4P28324 431 aa16.81■□□□□ 0.28
SMC4-211ENST00000469858 CLK3P49761 638 aaKnown RBP16.81■□□□□ 0.28
SMC4-211ENST00000469858 TAS2R41P59536 307 aa16.81■□□□□ 0.28
SMC4-211ENST00000469858 NPRL3Q12980 569 aa16.81■□□□□ 0.28
SMC4-211ENST00000469858 RAPSNQ13702 412 aa16.81■□□□□ 0.28
SMC4-211ENST00000469858 CT45A2Q5DJT8 189 aa16.81■□□□□ 0.28
SMC4-211ENST00000469858 MRPL2Q5T653 305 aaKnown RBP16.81■□□□□ 0.28
SMC4-211ENST00000469858 ZNF691Q5VV52 312 aa16.81■□□□□ 0.28
SMC4-211ENST00000469858 OR7G1Q8NGA0 311 aa16.81■□□□□ 0.28
SMC4-211ENST00000469858 SLC7A13Q8TCU3 470 aa16.81■□□□□ 0.28
SMC4-211ENST00000469858 PSD2Q9BQI7 771 aa16.81■□□□□ 0.28
SMC4-211ENST00000469858 POFUT2Q9Y2G5 429 aa16.81■□□□□ 0.28
SMC4-211ENST00000469858 OR10H1Q9Y4A9 318 aa16.81■□□□□ 0.28
SMC4-211ENST00000469858 A0A1W2PRQ8 180 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 ARRDC5A6NEK1 342 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 CPSF4LA6NMK7 179 aaKnown RBP16.8■□□□□ 0.28
SMC4-211ENST00000469858 GP1BAP07359 652 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 CCNYL3P0C7X3 344 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 CBLP22681 906 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 SLC37A1P57057 533 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 OCA2Q04671 838 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 ZFP36L1Q07352 338 aaKnown RBP16.8■□□□□ 0.28
SMC4-211ENST00000469858 TRA2AQ13595 282 aaKnown RBP eCLIP16.8■□□□□ 0.285e-7■■□□□ 14
SMC4-211ENST00000469858 DGCR6Q14129 220 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 SF3A2Q15428 464 aaKnown RBP16.8■□□□□ 0.28
SMC4-211ENST00000469858 FAAH2Q6GMR7 532 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 ZNF770Q6IQ21 691 aaPredicted RBP16.8■□□□□ 0.28
SMC4-211ENST00000469858 ZNF614Q8N883 585 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 AGBL5Q8NDL9 886 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 SLC2A12Q8TD20 617 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 GABARAPL3Q9BY60 117 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 MAN2C1Q9NTJ4 1040 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 GMPPBQ9Y5P6 360 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 A6NHS1 94 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 FAAHO00519 579 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 AP3D1O14617 1153 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 PRKNO60260 465 aaPredicted RBP16.8■□□□□ 0.28
SMC4-211ENST00000469858 OR10H3O60404 316 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 GASTP01350 101 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 ZGLP1P0C6A0 271 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 DCDP81605 110 aaKnown RBP16.8■□□□□ 0.28
SMC4-211ENST00000469858 IL18R1Q13478 541 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 KEAP1Q14145 624 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 LANCL3Q6ZV70 420 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 TSPAN14Q8NG11 270 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 MRPS26Q9BYN8 205 aaKnown RBP16.8■□□□□ 0.28
SMC4-211ENST00000469858 TGIF2Q9GZN2 237 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 CBLCQ9ULV8 474 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 NTNG1Q9Y2I2 539 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 WDR87Q6ZQQ6 2873 aa16.8■□□□□ 0.28
SMC4-211ENST00000469858 SH3PXD2BA1X283 911 aa16.79■□□□□ 0.28
SMC4-211ENST00000469858 OXSR1O95747 527 aaPredicted RBP16.79■□□□□ 0.28
SMC4-211ENST00000469858 DDAH2O95865 285 aa16.79■□□□□ 0.28
SMC4-211ENST00000469858 CLPTM1O96005 669 aa16.79■□□□□ 0.28
SMC4-211ENST00000469858 HBQ1P09105 142 aa16.79■□□□□ 0.28
SMC4-211ENST00000469858 RORAP35398 523 aa16.79■□□□□ 0.28
SMC4-211ENST00000469858 IL5RAQ01344 420 aa16.79■□□□□ 0.28
SMC4-211ENST00000469858 KCTD21Q4G0X4 260 aa16.79■□□□□ 0.28
SMC4-211ENST00000469858 PDZK1Q5T2W1 519 aa16.79■□□□□ 0.28
SMC4-211ENST00000469858 LAIR1Q6GTX8 287 aa16.79■□□□□ 0.28
SMC4-211ENST00000469858 PODNL1Q6PEZ8 512 aa16.79■□□□□ 0.28
SMC4-211ENST00000469858 C7orf57Q8NEG2 295 aa16.79■□□□□ 0.28
SMC4-211ENST00000469858 ZNF721Q8TF20 911 aa16.79■□□□□ 0.28
SMC4-211ENST00000469858 PMM1Q92871 262 aa16.79■□□□□ 0.28
SMC4-211ENST00000469858 MCHR1Q99705 422 aa16.79■□□□□ 0.28
SMC4-211ENST00000469858 FUZQ9BT04 418 aa16.79■□□□□ 0.28
SMC4-211ENST00000469858 IGLV3-12A0A075B6K2 115 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 POLR1CO15160 346 aaPredicted RBP16.78■□□□□ 0.28
SMC4-211ENST00000469858 IGKV3-11P04433 115 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 FGF5P12034 268 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 GSSP48637 474 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 CDH15P55291 814 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 RPP38P78345 283 aaKnown RBP16.78■□□□□ 0.28
SMC4-211ENST00000469858 CD47Q08722 323 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 APOFQ13790 326 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 IL11RAQ14626 422 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 MEP1AQ16819 746 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 CTU2Q2VPK5 515 aaKnown RBP16.78■□□□□ 0.28
SMC4-211ENST00000469858 CCDC157Q569K6 752 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 ENTPD8Q5MY95 495 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 RNF220Q5VTB9 566 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 ZNF385CQ66K41 422 aaPredicted RBP16.78■□□□□ 0.28
SMC4-211ENST00000469858 PLEKHM3Q6ZWE6 761 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 BCORP1Q8N888 145 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 SETD9Q8NE22 299 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 PLPP5Q8NEB5 264 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 OR14A16Q8NHC5 309 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 ADAMTS16Q8TE57 1224 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 DIO2Q92813 273 aa16.78■□□□□ 0.28
SMC4-211ENST00000469858 DAZLQ92904 295 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms