RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 FAM227AF5H4B4 570 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 FABP7O15540 132 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 PRODHO43272 600 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 CHP2O43745 196 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 SGTAO43765 313 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 PRKYO43930 277 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 SH3BP5O60239 455 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 PLOD3O60568 738 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 TBL1XO60907 577 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 SOX14O95416 240 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 RAF1P04049 648 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 IGFBP1P08833 259 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-205ENST00000469550 CSKP41240 450 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 BDKRB1P46663 353 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 GIPRP48546 466 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 TPMTP51580 245 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 CASP9P55211 416 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 CDK5Q00535 292 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 ACSM1Q08AH1 577 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 ZNF234Q14588 700 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 MFSD13AQ14CX5 517 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 HSD17B12Q53GQ0 312 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 PLA1AQ53H76 456 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 HACD4Q5VWC8 232 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 FAM205BPQ63HN1 556 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 MED27Q6P2C8 311 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 TMIGD1Q6UXZ0 262 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 IKBIPQ70UQ0 350 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 KIAA0907Q7Z7F0 614 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-205ENST00000469550 NAXDQ8IW45 347 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 LRRC17Q8N6Y2 441 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 SYT14Q8NB59 555 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 ZNF485Q8NCK3 441 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 GPR32P1Q8NGA4 272 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 C1orf216Q8TAB5 229 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 WFIKKN2Q8TEU8 576 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 UCN3Q969E3 161 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 OMA1Q96E52 524 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 WDR34Q96EX3 536 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 SORCS2Q96PQ0 1159 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 OR4K3Q96R72 315 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 C1QTNF7Q9BXJ2 289 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 FBRSQ9HAH7 460 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 STOX2Q9P2F5 926 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-205ENST00000469550 MOSPD1Q9UJG1 213 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 NCKAP1Q9Y2A7 1128 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 IGF2RP11717 2491 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 PTPRBP23467 1997 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 PLXNB3Q9ULL4 1909 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 LOC102723532A0A0G2JNH3 316 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 A0A1W2PRQ8 180 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 ARHGEF33A8MVX0 844 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 ISM1B1AKI9 464 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 MEN1O00255 615 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 SEMA7AO75326 666 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 OR7A10O76100 309 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 IGSF6O95976 241 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 DHFRP00374 187 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 HLA-DPB1P04440 258 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 IFI30P13284 250 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 NAGAP17050 411 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 CTRB1P17538 263 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 TNNI3P19429 210 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 MAPK9P45984 424 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 RPS13P62277 151 aaKnown RBP8.99□□□□□ -0.97
HDAC3-205ENST00000469550 PTSQ03393 145 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 C2orf80Q0P641 193 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 BAMBIQ13145 260 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 NAE1Q13564 534 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 TRIP6Q15654 476 aaKnown RBP8.99□□□□□ -0.97
HDAC3-205ENST00000469550 MPPE1Q53F39 396 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 CLLU1Q5K131 121 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 CTRB2Q6GPI1 263 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 DBX2Q6ZNG2 339 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 SLCO4C1Q6ZQN7 724 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 USP45Q70EL2 814 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 COMMD6Q7Z4G1 85 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 BCDIN3DQ7Z5W3 292 aaKnown RBP8.99□□□□□ -0.97
HDAC3-205ENST00000469550 MRGPREQ86SM8 312 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 KIF18BQ86Y91 864 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 GPALPP1Q8IXQ4 340 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 ARIH2OSQ8N7S6 290 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 GPR156Q8NFN8 814 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 OR2I1PQ8NGU4 316 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 OR6K2Q8NGY2 324 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 BAHD1Q8TBE0 780 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-205ENST00000469550 ZNF431Q8TF32 576 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-205ENST00000469550 C16orf78Q8WTQ4 265 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 NACC2Q96BF6 587 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 ECHDC3Q96DC8 303 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 SIPA1Q96FS4 1042 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 RADILQ96JH8 1075 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 LRR1Q96L50 414 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 ZNF354BQ96LW1 612 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 C17orf62Q9BQA9 187 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 GPR174Q9BXC1 333 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 NLNQ9BYT8 704 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 MED28Q9H204 178 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 SEMA3GQ9NS98 782 aa8.99□□□□□ -0.97
HDAC3-205ENST00000469550 ASB6Q9NWX5 421 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms