RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 TAS2R13Q9NYV9 303 aa4.69□□□□□ -1.66
PTPN4-209ENST00000469511 CISD1Q9NZ45 108 aaKnown RBP4.69□□□□□ -1.66
PTPN4-209ENST00000469511 KLRF1Q9NZS2 232 aa4.69□□□□□ -1.66
PTPN4-209ENST00000469511 FLRT3Q9NZU0 649 aa4.69□□□□□ -1.66
PTPN4-209ENST00000469511 LPAR3Q9UBY5 353 aa4.69□□□□□ -1.66
PTPN4-209ENST00000469511 COA3Q9Y2R0 106 aaPredicted RBP4.69□□□□□ -1.66
PTPN4-209ENST00000469511 ASB4Q9Y574 426 aa4.69□□□□□ -1.66
PTPN4-209ENST00000469511 EPN1Q9Y6I3 576 aaPredicted RBP4.69□□□□□ -1.66
PTPN4-209ENST00000469511 SPACA6W5XKT8 324 aa4.69□□□□□ -1.66
PTPN4-209ENST00000469511 ARHGAP32A7KAX9 2087 aa4.69□□□□□ -1.66
PTPN4-209ENST00000469511 RYR3Q15413 4870 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 VWFP04275 2813 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 A0A088AWK7 358 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 IGHV4-61A0A0C4DH41 118 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 PRAMEF25A6NGN4 478 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 SERINC4A6NH21 518 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 OR6C76A6NM76 312 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 CAPN14A8MX76 684 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 E7EQL1 145 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 GOLGA6L19H0YKK7 550 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 H3BML4 177 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 PLPP1O14494 284 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 CLGNO14967 610 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 TCF21O43680 179 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 KIAA0513O60268 411 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 GCM2O75603 506 aaPredicted RBP4.68□□□□□ -1.66
PTPN4-209ENST00000469511 SCELO95171 688 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 CCDC175P0C221 793 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 CPEP16870 476 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 ZNF10P21506 573 aaPredicted RBP4.68□□□□□ -1.66
PTPN4-209ENST00000469511 EDNRAP25101 427 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 SSR2P43308 183 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 KCNC1P48547 511 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 HSPA7P48741 367 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 NEK2P51955 445 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 NUDT6P53370 316 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 GP2P55259 537 aaKnown RBP4.68□□□□□ -1.66
PTPN4-209ENST00000469511 EEF1A1P68104 462 aaKnown RBP4.68□□□□□ -1.66
PTPN4-209ENST00000469511 SPOCK1Q08629 439 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 KIF5AQ12840 1032 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 CHIT1Q13231 466 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 GGTLC2Q14390 218 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 KIR3DS1Q14943 382 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 SPA17Q15506 151 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 TSNQ15631 228 aaKnown RBP4.68□□□□□ -1.66
PTPN4-209ENST00000469511 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.68□□□□□ -1.66
PTPN4-209ENST00000469511 AP5B1Q2VPB7 878 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 EEF1A1P5Q5VTE0 462 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 OR4C11Q6IEV9 310 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 OR2A2Q6IF42 318 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 LRRC8EQ6NSJ5 796 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 PPP4R4Q6NUP7 873 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 SLC30A6Q6NXT4 461 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 B3GLCTQ6Y288 498 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 CBLL1Q75N03 491 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 NUP54Q7Z3B4 507 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 NUFIP2Q7Z417 695 aaKnown RBP4.68□□□□□ -1.66
PTPN4-209ENST00000469511 DTX2Q86UW9 622 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 GPR180Q86V85 440 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 PLCZ1Q86YW0 608 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 PPM1NQ8N819 430 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 GPATCH11Q8N954 259 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 BANPQ8N9N5 519 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 SEMA6DQ8NFY4 1073 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 TTLQ8NG68 377 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 TMBIM1Q969X1 311 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 NXNL1Q96CM4 212 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 KCNC2Q96PR1 638 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 KLHDC3Q9BQ90 382 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 TRIM54Q9BYV2 358 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 TSGA10Q9BZW7 698 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 DSN1Q9H410 356 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 TNFRSF12AQ9NP84 129 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 FBXO34Q9NWN3 711 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 NPAP1Q9NZP6 1156 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 MED11Q9P086 117 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 GPR160Q9UJ42 338 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 MCM8Q9UJA3 840 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 KCNS2Q9ULS6 477 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 VWA7Q9Y334 891 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 MAD1L1Q9Y6D9 718 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 COMMD10Q9Y6G5 202 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 WNK2Q9Y3S1 2297 aa4.68□□□□□ -1.66
PTPN4-209ENST00000469511 A0A0A6YYD5 115 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 A0A0G2JK05 382 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 OR2M5A3KFT3 312 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 LRP5LA4QPB2 252 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 EFCAB8A8MWE9 144 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 VWC2LB2RUY7 222 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 ZNF561-AS1K7EIQ3 104 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 GMFGO60234 142 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 TSPAN2O60636 221 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 PIAS1O75925 651 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 TGFAP01135 160 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 ENO2P09104 434 aaPredicted RBP4.67□□□□□ -1.66
PTPN4-209ENST00000469511 RHOXF2BP0C7M4 288 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 SLC35E2BP0CK96 405 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 SLC35E2P0CK97 266 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 CCDC166P0CW27 439 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 PCNAP12004 261 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms