RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 TRBV4-1A0A0J9YWV2 114 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 TCRBV16S1A1N1A0A5B0 115 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 IRGMA1A4Y4 181 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 CPED1A4D0V7 1026 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 CDHR4A6H8M9 788 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 EFCAB10A6NFE3 127 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 EFCAB7A8K855 629 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 HAX1O00165 279 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 FCMRO60667 390 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 MED26O95402 600 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 EPPINO95925 133 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 PDGFBP01127 241 aaPredicted RBP9.46□□□□□ -0.9
MSH5-213ENST00000468136 GASTP01350 101 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 RPLP0P05388 317 aaKnown RBP9.46□□□□□ -0.9
MSH5-213ENST00000468136 CD63P08962 238 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 FOLR1P15328 257 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 DRD5P21918 477 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 ADH7P40394 386 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 RBM34P42696 430 aaKnown RBP9.46□□□□□ -0.9
MSH5-213ENST00000468136 PPICP45877 212 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 SNRPGP62308 76 aaKnown RBP9.46□□□□□ -0.9
MSH5-213ENST00000468136 DAB2P98082 770 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 PSG6Q00889 435 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 OCA2Q04671 838 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 TSPAN31Q12999 210 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 TARDBPQ13148 414 aaKnown RBP eCLIP9.46□□□□□ -0.9
MSH5-213ENST00000468136 PIN1Q13526 163 aaPredicted RBP9.46□□□□□ -0.9
MSH5-213ENST00000468136 LAPTM4AQ15012 233 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 GPR68Q15743 365 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 MEP1AQ16819 746 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 TRIM61Q5EBN2 209 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 SLC25A30Q5SVS4 291 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 MEDAGQ5VYS4 303 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 SLX4IPQ5VYV7 408 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 PGBD2Q6P3X8 592 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 PODNL1Q6PEZ8 512 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 KLHL17Q6TDP4 642 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 CASP12Q6UXS9 341 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 ZNF836Q6ZNA1 936 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 RASSF6Q6ZTQ3 369 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 KCTD8Q6ZWB6 473 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 PRSS48Q7RTY5 328 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 SATL1Q86VE3 508 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 VRK2Q86Y07 508 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 TMEM151BQ8IW70 566 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 ZNF615Q8N8J6 731 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 MORN4Q8NDC4 146 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 OR4K5Q8NGD3 323 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 OR9Q2Q8NGE9 314 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 OR4D11Q8NGI4 311 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 OR8J1Q8NGP2 316 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 WDR36Q8NI36 951 aaKnown RBP9.46□□□□□ -0.9
MSH5-213ENST00000468136 C9orf43Q8TAL5 461 aaPredicted RBP9.46□□□□□ -0.9
MSH5-213ENST00000468136 OSTF1Q92882 214 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 SLC41A3Q96GZ6 507 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 NIPSNAP1Q9BPW8 284 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 CLN6Q9NWW5 311 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 PTTG2Q9NZH5 202 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 CNOT2Q9NZN8 540 aaKnown RBP9.46□□□□□ -0.9
MSH5-213ENST00000468136 COPS7AQ9UBW8 275 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 FTSJ1Q9UET6 329 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 RSL24D1Q9UHA3 163 aaKnown RBP9.46□□□□□ -0.9
MSH5-213ENST00000468136 NXT1Q9UKK6 140 aaKnown RBP9.46□□□□□ -0.9
MSH5-213ENST00000468136 MKLN1Q9UL63 735 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 CBLCQ9ULV8 474 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 GPR55Q9Y2T6 319 aaPredicted RBP9.46□□□□□ -0.9
MSH5-213ENST00000468136 CLDN16Q9Y5I7 305 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 CLCA3PQ9Y6N3 262 aa9.46□□□□□ -0.9
MSH5-213ENST00000468136 LY6G6EA0A0G2JKS1 128 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 FRG2CA6NGY1 282 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 C17orf105B2RV13 164 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 TMX2-CTNND1H3BSU7 103 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 TO15178 435 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 RGS10O43665 173 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 CTSBP07858 339 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 PIPP12273 146 aaPredicted RBP9.45□□□□□ -0.9
MSH5-213ENST00000468136 CYP4B1P13584 511 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 CHMP24386 653 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 FPR3P25089 353 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 ELK4P28324 431 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 POLR2IP36954 125 aaKnown RBP9.45□□□□□ -0.9
MSH5-213ENST00000468136 GRK6P43250 576 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 SMSP52788 366 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 SLC35A2P78381 396 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 MAT1AQ00266 395 aaKnown RBP9.45□□□□□ -0.9
MSH5-213ENST00000468136 RHAGQ02094 409 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 EXOSC7Q15024 291 aaKnown RBP9.45□□□□□ -0.9
MSH5-213ENST00000468136 PTGES3Q15185 160 aaKnown RBP9.45□□□□□ -0.9
MSH5-213ENST00000468136 NPTX1Q15818 432 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 CTU2Q2VPK5 515 aaKnown RBP9.45□□□□□ -0.9
MSH5-213ENST00000468136 TMEM201Q5SNT2 666 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 SNAP47Q5SQN1 464 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 MRPL2Q5T653 305 aaKnown RBP9.45□□□□□ -0.9
MSH5-213ENST00000468136 GUSBP11Q6P575 273 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 B3GNT6Q6ZMB0 384 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 ZNF730Q6ZMV8 503 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 RBM44Q6ZP01 1051 aaKnown RBP9.45□□□□□ -0.9
MSH5-213ENST00000468136 MBOAT2Q6ZWT7 520 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 B3GNT8Q7Z7M8 397 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 GATAD2AQ86YP4 633 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms