RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 FBXL4Q9UKA2 621 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 PRPF19Q9UMS4 504 aaKnown RBP6.36□□□□□ -1.39
SCAF4-204ENST00000467731 SPEF1Q9Y4P9 236 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 TPRP12270 2363 aaKnown RBP6.36□□□□□ -1.39
SCAF4-204ENST00000467731 EXPH5Q8NEV8 1989 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 PGM1P36871 562 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 PRIM2P49643 509 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 BPIFB3P59826 476 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 PPP2R2BQ00005 443 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 LIPEQ05469 1076 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 RUNX1T1Q06455 604 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 CEACAM7Q14002 265 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 EBPQ15125 230 aaKnown RBP6.36□□□□□ -1.39
SCAF4-204ENST00000467731 NNATQ16517 81 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 DUSP5Q16690 384 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 CYP51A1Q16850 503 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 PLAG1Q6DJT9 500 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 CDC73Q6P1J9 531 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 USP43Q70EL4 1123 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 SERPINA11Q86U17 422 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 HPS6Q86YV9 775 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 CDRT4Q8N9R6 151 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 SLC22A8Q8TCC7 542 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 ADAMTS15Q8TE58 950 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 THAP3Q8WTV1 239 aaPredicted RBP6.36□□□□□ -1.39
SCAF4-204ENST00000467731 XAGE5Q8WWM1 108 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 CCDC124Q96CT7 223 aaKnown RBP6.36□□□□□ -1.39
SCAF4-204ENST00000467731 OR7D2Q96RA2 312 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 RAD21L1Q9H4I0 556 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 CCDC86Q9H6F5 360 aaKnown RBP6.36□□□□□ -1.39
SCAF4-204ENST00000467731 DCLRE1BQ9H816 532 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 PLGRKTQ9HBL7 147 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 PRODH2Q9UF12 536 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 CD300AQ9UGN4 299 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 IFT52Q9Y366 437 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 KCNE3Q9Y6H6 103 aa6.36□□□□□ -1.39
SCAF4-204ENST00000467731 TRBV11-1A0A0K0K1C0 115 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 C2orf92A0A1B0GVN3 265 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 CDC14CA4D256 554 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 NKX2-8O15522 239 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 TNFRSF21O75509 655 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 OR5F1O95221 314 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 CT45A8P0DMV1 189 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 CT45A9P0DMV2 189 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 PRKAR1AP10644 381 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 ACP2P11117 423 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 TCEA1P23193 301 aaKnown RBP6.35□□□□□ -1.39
SCAF4-204ENST00000467731 MAP3K8P41279 467 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 GSK3BP49841 420 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 KHKP50053 298 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 GZMMP51124 257 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 IST1P53990 364 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 RNF4P78317 190 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 CD83Q01151 205 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 TRAP1Q12931 704 aaKnown RBP6.35□□□□□ -1.39
SCAF4-204ENST00000467731 EXT1Q16394 746 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 KCTD21Q4G0X4 260 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 CT45A2Q5DJT8 189 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 SAMD4BQ5PRF9 694 aaKnown RBP6.35□□□□□ -1.39
SCAF4-204ENST00000467731 EXOSC6Q5RKV6 272 aaKnown RBP6.35□□□□□ -1.39
SCAF4-204ENST00000467731 FAM122CQ6P4D5 195 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 ZCCHC12Q6PEW1 402 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 NPSR1Q6W5P4 371 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 HSDL2Q6YN16 418 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 SLC29A4Q7RTT9 530 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 CALHM3Q86XJ0 350 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 ULK2Q8IYT8 1036 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 LGI4Q8N135 537 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 OR2T12Q8NG77 320 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 ELP5Q8TE02 316 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 PIK3R3Q92569 461 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 UTP4Q969X6 686 aaKnown RBP6.35□□□□□ -1.39
SCAF4-204ENST00000467731 ADIPOR1Q96A54 375 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 COQ7Q99807 217 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 LMF2Q9BU23 707 aaKnown RBP6.35□□□□□ -1.39
SCAF4-204ENST00000467731 WWTR1Q9GZV5 400 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 LIN28AQ9H9Z2 209 aaKnown RBP6.35□□□□□ -1.39
SCAF4-204ENST00000467731 DKK4Q9UBT3 224 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 KCNN3Q9UGI6 736 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 PRRC2CQ9Y520 2896 aaKnown RBP6.35□□□□□ -1.39
SCAF4-204ENST00000467731 EML6Q6ZMW3 1958 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 CACNA1GO43497 2377 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 TRAV6A0A075B6T7 132 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 PRAMEF27A3QJZ7 478 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 DUXAA6NLW8 204 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 OR6C76A6NM76 312 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 B8ZZF3 427 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 PEX12O00623 359 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 HPP00738 406 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 BMP2P12643 396 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 EEFSECP57772 596 aaKnown RBP6.35□□□□□ -1.39
SCAF4-204ENST00000467731 POLR2GP62487 172 aaKnown RBP eCLIP6.35□□□□□ -1.39
SCAF4-204ENST00000467731 CHRNEQ04844 493 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 Q0VFX4 171 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 TOMM20Q15388 145 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 ZNHIT3Q15649 155 aaPredicted RBP6.35□□□□□ -1.39
SCAF4-204ENST00000467731 PGM2L1Q6PCE3 622 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 GALNT10Q86SR1 603 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 PTOV1Q86YD1 416 aa6.35□□□□□ -1.39
SCAF4-204ENST00000467731 SLC44A2Q8IWA5 706 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms