RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 DLEU7Q6UYE1 221 aa12.96□□□□□ -0.33
BRAT1-203ENST00000467558 FAM83HQ6ZRV2 1179 aaPredicted RBP12.96□□□□□ -0.33
BRAT1-203ENST00000467558 ZFPM2Q8WW38 1151 aa12.96□□□□□ -0.33
BRAT1-203ENST00000467558 C1QTNF2Q9BXJ5 285 aa12.96□□□□□ -0.33
BRAT1-203ENST00000467558 PLAC1Q9HBJ0 212 aa12.96□□□□□ -0.33
BRAT1-203ENST00000467558 MCCC2Q9HCC0 563 aa12.96□□□□□ -0.33
BRAT1-203ENST00000467558 STUB1Q9UNE7 303 aa12.96□□□□□ -0.33
BRAT1-203ENST00000467558 ATAD5Q96QE3 1844 aa12.96□□□□□ -0.34
BRAT1-203ENST00000467558 ZNF701M0R085 212 aaPredicted RBP12.96□□□□□ -0.34
BRAT1-203ENST00000467558 PSMD9O00233 223 aa12.96□□□□□ -0.34
BRAT1-203ENST00000467558 PLPP1O14494 284 aa12.96□□□□□ -0.34
BRAT1-203ENST00000467558 EIF1AYO14602 144 aaKnown RBP12.96□□□□□ -0.34
BRAT1-203ENST00000467558 AFF3P51826 1226 aaKnown RBP12.96□□□□□ -0.34
BRAT1-203ENST00000467558 EPHA5P54756 1037 aa12.96□□□□□ -0.34
BRAT1-203ENST00000467558 NDUFA5Q16718 116 aa12.96□□□□□ -0.34
BRAT1-203ENST00000467558 LRIF1Q5T3J3 769 aa12.96□□□□□ -0.34
BRAT1-203ENST00000467558 WDR53Q7Z5U6 358 aaPredicted RBP12.96□□□□□ -0.34
BRAT1-203ENST00000467558 ZNF227Q86WZ6 799 aa12.96□□□□□ -0.34
BRAT1-203ENST00000467558 CPOQ8IVL8 374 aa12.96□□□□□ -0.34
BRAT1-203ENST00000467558 ZNF101Q8IZC7 436 aa12.96□□□□□ -0.34
BRAT1-203ENST00000467558 C1GALT1Q9NS00 363 aa12.96□□□□□ -0.34
BRAT1-203ENST00000467558 RXFP3Q9NSD7 469 aa12.96□□□□□ -0.34
BRAT1-203ENST00000467558 SIT1Q9Y3P8 196 aa12.96□□□□□ -0.34
BRAT1-203ENST00000467558 PLEKHM1Q9Y4G2 1056 aa12.96□□□□□ -0.34
BRAT1-203ENST00000467558 PCDHGB2Q9Y5G2 931 aa12.96□□□□□ -0.34
BRAT1-203ENST00000467558 POM121BA6NF01 834 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 PRODHO43272 600 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 ZNF26P17031 533 aaPredicted RBP12.95□□□□□ -0.34
BRAT1-203ENST00000467558 CD27P26842 260 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 TPTEP56180 551 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 CLRN1P58418 232 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 CTXN1P60606 82 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 CHRNEQ04844 493 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 CCNJQ5T5M9 372 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 C22orf42Q6IC83 251 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 PODNL1Q6PEZ8 512 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 BTN2A1Q7KYR7 527 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 ZNF627Q7L945 461 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 CEACAM19Q7Z692 300 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 ALG14Q96F25 216 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 S100A16Q96FQ6 103 aaKnown RBP12.95□□□□□ -0.34
BRAT1-203ENST00000467558 TTYH2Q9BSA4 534 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 TNFRSF12AQ9NP84 129 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.95□□□□□ -0.34
BRAT1-203ENST00000467558 GREB1LQ9C091 1923 aaPredicted RBP12.95□□□□□ -0.34
BRAT1-203ENST00000467558 PRAMEF33A0A0G2JMD5 474 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 PRAMEF10O60809 474 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 GKN3PP0CG01 181 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 NR0B2Q15466 257 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 HSD17B12Q53GQ0 312 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 PLAG1Q6DJT9 500 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 TMEM184AQ6ZMB5 413 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 SPARTQ8N0X7 666 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 CHDHQ8NE62 594 aaPredicted RBP12.95□□□□□ -0.34
BRAT1-203ENST00000467558 TMIGD2Q96BF3 282 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 SGPP1Q9BX95 441 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 GLIPR2Q9H4G4 154 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 TMEM38AQ9H6F2 299 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 NCDNQ9UBB6 729 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 FOCADQ5VW36 1801 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 PCDH17O14917 1159 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 LCKP06239 509 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 BCL6P41182 706 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 SOX2P48431 317 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 KCNJ10P78508 379 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 APOFQ13790 326 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 ARFRP1Q13795 201 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 ULK3Q6PHR2 472 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 P4HA3Q7Z4N8 544 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 SLC22A16Q86VW1 577 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 SLITRK4Q8IW52 837 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 AMDHD1Q96NU7 426 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 CUTCQ9NTM9 273 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 PPIL1Q9Y3C6 166 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 MYO10Q9HD67 2058 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 NPIPA5A0A0B4J1W7 369 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 TRBV2A0A0J9YWF9 115 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 SLC35F4A4IF30 521 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 NPIPA7E9PJI5 369 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 NPIPA8P0DM63 369 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 HOXC5Q00444 222 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 SEC23BQ15437 767 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 MANEAQ5SRI9 462 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 ZNF691Q5VV52 312 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 C18orf63Q68DL7 685 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 SLC48A1Q6P1K1 146 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 GDPGP1Q6ZNW5 385 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 VRK2Q86Y07 508 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 MKRN2Q9H000 416 aaKnown RBP12.95□□□□□ -0.34
BRAT1-203ENST00000467558 TBC1D29Q9UFV1 150 aa12.95□□□□□ -0.34
BRAT1-203ENST00000467558 A8MVJ9 347 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 NPIPA2E9PIF3 369 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 NPIPA3F8WFD2 350 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 CRHBPP24387 322 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 DPP6P42658 865 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 OR3A3P47888 321 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 OR3A2P47893 321 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 CDKN3Q16667 212 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 LAS2Q8IYD9 372 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 LNX2Q8N448 690 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms