RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 C5orf58C9J3I9 102 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 CDK2AP1O14519 115 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 ABCB7O75027 752 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 STX11O75558 287 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 REM1O75628 298 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 PDE5AO76074 875 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 H6PDO95479 791 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 CHRM4P08173 479 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 FBXO45P0C2W1 286 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 ATP6V1C1P21283 382 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 HTR1EP28566 365 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 IL12BP29460 328 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 LCN1P31025 176 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 SOX3P41225 446 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 CRISP3P54108 245 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 PNLIPRP2P54317 469 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 VEZF1Q14119 521 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 AP1ARQ63HQ0 302 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 REEP3Q6NUK4 255 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 PGM2L1Q6PCE3 622 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 BORAQ6PGQ7 559 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 ISLR2Q6UXK2 745 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 PRICKLE2Q7Z3G6 844 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 GPALPP1Q8IXQ4 340 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 DND1Q8IYX4 353 aaKnown RBP12.21□□□□□ -0.45
PDCD11-202ENST00000466959 BEST3Q8N1M1 668 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 FDCSPQ8NFU4 85 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 BBS10Q8TAM1 723 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 ASB15Q8WXK1 588 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 DIO2Q92813 273 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 EFHD2Q96C19 240 aaPredicted RBP12.21□□□□□ -0.45
PDCD11-202ENST00000466959 SPACA9Q96E40 222 aaPredicted RBP12.21□□□□□ -0.45
PDCD11-202ENST00000466959 CLPTM1LQ96KA5 538 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 COL21A1Q96P44 957 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 SAP130Q9H0E3 1048 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 SLC38A1Q9H2H9 487 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 MMADHCQ9H3L0 296 aaPredicted RBP12.21□□□□□ -0.45
PDCD11-202ENST00000466959 ZNF552Q9H707 407 aaPredicted RBP12.21□□□□□ -0.45
PDCD11-202ENST00000466959 BCL2L10Q9HD36 194 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 FBXO34Q9NWN3 711 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 WDR45Q9Y484 360 aa12.21□□□□□ -0.45
PDCD11-202ENST00000466959 DSPPQ9NZW4 1301 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 A0A0G2JPF8 293 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 ERICH4A6NGS2 130 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 OR6C70A6NIJ9 312 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 HNRNPCL2B2RXH8 293 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 HNRNPCL3B7ZW38 293 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 PYCARD-AS1I3L0S3 204 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 GSTA4O15217 222 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 HS6ST1O60243 411 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 KIAA0513O60268 411 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 OR6B1O95007 311 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 PGM3O95394 542 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 HNRNPCL4P0DMR1 293 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 ME2P23368 584 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 RFX3P48380 749 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 BNIP2Q12982 314 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 MFAP5Q13361 173 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 RAPSNQ13702 412 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 EFR3AQ14156 821 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 FXNQ16595 210 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 NTRK2Q16620 822 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 TBR1Q16650 682 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 ZNF791Q3KP31 576 aaPredicted RBP12.2□□□□□ -0.46
PDCD11-202ENST00000466959 RPS26P11Q5JNZ5 115 aaPredicted RBP12.2□□□□□ -0.46
PDCD11-202ENST00000466959 INTS11Q5TA45 600 aaKnown RBP12.2□□□□□ -0.46
PDCD11-202ENST00000466959 TYW3Q6IPR3 259 aaKnown RBP12.2□□□□□ -0.46
PDCD11-202ENST00000466959 PCSK4Q6UW60 755 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 FRRS1Q6ZNA5 592 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 OLIG3Q7RTU3 272 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 NUP54Q7Z3B4 507 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 ZAR1Q86SH2 424 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 GALNT10Q86SR1 603 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 PTRH1Q86Y79 214 aaKnown RBP12.2□□□□□ -0.46
PDCD11-202ENST00000466959 LURAP1LQ8IV03 231 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 ULK2Q8IYT8 1036 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 FBXW8Q8N3Y1 598 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 TMEM156Q8N614 296 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 FAM156AQ8NDB6 213 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 PMM1Q92871 262 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 ADOQ96SZ5 270 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 TREX2Q9BQ50 279 aaPredicted RBP12.2□□□□□ -0.46
PDCD11-202ENST00000466959 RUBCNLQ9H714 662 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 STMN3Q9NZ72 180 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 SUCOQ9UBS9 1254 aaKnown RBP12.2□□□□□ -0.46
PDCD11-202ENST00000466959 PCDHGA10Q9Y5H3 936 aa12.2□□□□□ -0.46
PDCD11-202ENST00000466959 FCMRO60667 390 aa12.19□□□□□ -0.46
PDCD11-202ENST00000466959 UGT2B11O75310 529 aa12.19□□□□□ -0.46
PDCD11-202ENST00000466959 ITGB2P05107 769 aa12.19□□□□□ -0.46
PDCD11-202ENST00000466959 ALPPP05187 535 aa12.19□□□□□ -0.46
PDCD11-202ENST00000466959 CYP4B1P13584 511 aa12.19□□□□□ -0.46
PDCD11-202ENST00000466959 GGT1P19440 569 aa12.19□□□□□ -0.46
PDCD11-202ENST00000466959 TCN1P20061 433 aaPredicted RBP12.19□□□□□ -0.46
PDCD11-202ENST00000466959 CASRP41180 1078 aa12.19□□□□□ -0.46
PDCD11-202ENST00000466959 HLCSP50747 726 aa12.19□□□□□ -0.46
PDCD11-202ENST00000466959 PCBP3P57721 371 aaKnown RBP12.19□□□□□ -0.46
PDCD11-202ENST00000466959 FBXW4P57775 412 aa12.19□□□□□ -0.46
PDCD11-202ENST00000466959 CHRNEQ04844 493 aa12.19□□□□□ -0.46
PDCD11-202ENST00000466959 LY6DQ14210 128 aa12.19□□□□□ -0.46
PDCD11-202ENST00000466959 FLYWCH1Q4VC44 716 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms