RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 GATA3P23771 443 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 ELAVL4P26378 380 aaKnown RBP5.28□□□□□ -1.56
LRCH3-212ENST00000466845 LAP3P28838 519 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 UGT1A3P35503 534 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 UGT1A5P35504 534 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 CHI3L1P36222 383 aaPredicted RBP5.28□□□□□ -1.56
LRCH3-212ENST00000466845 GPR12P47775 334 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 RFX5P48382 616 aaPredicted RBP5.28□□□□□ -1.56
LRCH3-212ENST00000466845 RAB13P51153 203 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 SLC37A1P57057 533 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 CCZ1BP86790 482 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 CCZ1P86791 482 aaPredicted RBP5.28□□□□□ -1.56
LRCH3-212ENST00000466845 MYL7Q01449 175 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 RBPJQ06330 500 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 GABPAQ06546 454 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 TNFRSF9Q07011 255 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 PPP1R8Q12972 351 aaKnown RBP5.28□□□□□ -1.56
LRCH3-212ENST00000466845 ZNF268Q14587 947 aaPredicted RBP5.28□□□□□ -1.56
LRCH3-212ENST00000466845 ITIH4Q14624 930 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 SLC9A3R2Q15599 337 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 EXOC3L2Q2M3D2 409 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 DCAF6Q58WW2 860 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 PRAMEF7Q5VXH5 474 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 TTC23Q5W5X9 447 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 SEL1L3Q68CR1 1132 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 ELP2Q6IA86 826 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 APOBEC3HQ6NTF7 200 aaKnown RBP5.28□□□□□ -1.56
LRCH3-212ENST00000466845 GDPD3Q7L5L3 318 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 PHF13Q86YI8 300 aaPredicted RBP5.28□□□□□ -1.56
LRCH3-212ENST00000466845 RASGRP3Q8IV61 690 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 DCUN1D3Q8IWE4 304 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 ZNF100Q8IYN0 542 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 ARHGAP24Q8N264 748 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 ZNF561Q8N587 486 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 OR5T3Q8NGG3 340 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 HM13Q8TCT9 377 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 WFIKKN2Q8TEU8 576 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 CHPT1Q8WUD6 406 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 SMPDL3BQ92485 455 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 NRGNQ92686 78 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 DAZLQ92904 295 aaKnown RBP5.28□□□□□ -1.56
LRCH3-212ENST00000466845 SLC38A4Q969I6 547 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 TMEM125Q96AQ2 219 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 SPSB1Q96BD6 273 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 ELMOD3Q96FG2 381 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 NSL1Q96IY1 281 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 C3orf30Q96M34 536 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 KLHL15Q96M94 604 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 TECTBQ96PL2 329 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 OR5B2Q96R09 309 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 NPAS1Q99742 590 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 NEURL2Q9BR09 285 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 SLC30A2Q9BRI3 323 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 C2orf88Q9BSF0 95 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 ZNF2Q9BSG1 426 aaPredicted RBP5.28□□□□□ -1.56
LRCH3-212ENST00000466845 MECRQ9BV79 373 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 ALG8Q9BVK2 526 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 SRRQ9GZT4 340 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 SIRPDQ9H106 197 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 VCXQ9H320 206 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 OR2S2Q9NQN1 319 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 DUSP22Q9NRW4 184 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 PIGVQ9NUD9 493 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 TMEM161AQ9NX61 479 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 FBXL3Q9UKT7 428 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 IKZF3Q9UKT9 509 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 CLEC4EQ9ULY5 219 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 SLC22A13Q9Y226 551 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 RIPK3Q9Y572 518 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 NPTNQ9Y639 398 aa5.28□□□□□ -1.56
LRCH3-212ENST00000466845 A0A1W2PR77 199 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 A6NIZ1 184 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 H3BMM5 538 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 J3KTA2 159 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 M0R296 226 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 F2RL2O00254 374 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 CCRL2O00421 344 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 SURF4O15260 269 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 EMC8O43402 210 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 PRAMEF2O60811 474 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 BCL10O95999 233 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 IFNA2P01563 188 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 HEXAP06865 529 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 CRYGBP07316 175 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 GSTA1P08263 222 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 FBP1P09467 338 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 CDH1P12830 882 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 NDUFB7P17568 137 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 PAICSP22234 425 aaKnown RBP5.27□□□□□ -1.57
LRCH3-212ENST00000466845 IGFBP5P24593 272 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 ACKR3P25106 362 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 PSMB5P28074 263 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 C21orf33P30042 268 aaPredicted RBP5.27□□□□□ -1.57
LRCH3-212ENST00000466845 FCGR2BP31994 310 aaPredicted RBP5.27□□□□□ -1.57
LRCH3-212ENST00000466845 STX2P32856 288 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 AHRP35869 848 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 CPOXP36551 454 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 NSFP46459 744 aaKnown RBP5.27□□□□□ -1.57
LRCH3-212ENST00000466845 EIF2B2P49770 351 aaKnown RBP5.27□□□□□ -1.57
LRCH3-212ENST00000466845 SUOXP51687 545 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms