RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 CLDN15P56746 228 aa17.29■□□□□ 0.36
COL9A3-206ENST00000466532 EEFSECP57772 596 aaKnown RBP17.29■□□□□ 0.36
COL9A3-206ENST00000466532 KRTAP21-3Q3LHN1 58 aa17.29■□□□□ 0.36
COL9A3-206ENST00000466532 CCDC153Q494R4 210 aa17.29■□□□□ 0.36
COL9A3-206ENST00000466532 VWA1Q6PCB0 445 aa17.29■□□□□ 0.36
COL9A3-206ENST00000466532 GSPT2Q8IYD1 628 aaKnown RBP17.29■□□□□ 0.36
COL9A3-206ENST00000466532 CCDC63Q8NA47 563 aa17.29■□□□□ 0.36
COL9A3-206ENST00000466532 OR5M1Q8NGP8 315 aa17.29■□□□□ 0.36
COL9A3-206ENST00000466532 STARD4Q96DR4 205 aa17.29■□□□□ 0.36
COL9A3-206ENST00000466532 LMF2Q9BU23 707 aaKnown RBP17.29■□□□□ 0.36
COL9A3-206ENST00000466532 TNFRSF12AQ9NP84 129 aa17.29■□□□□ 0.36
COL9A3-206ENST00000466532 DLL4Q9NR61 685 aa17.29■□□□□ 0.36
COL9A3-206ENST00000466532 EIF3LQ9Y262 564 aaKnown RBP17.29■□□□□ 0.36
COL9A3-206ENST00000466532 ZNF337Q9Y3M9 751 aa17.29■□□□□ 0.36
COL9A3-206ENST00000466532 TESMINQ9Y4I5 508 aa17.29■□□□□ 0.36
COL9A3-206ENST00000466532 H0YC42 278 aa17.28■□□□□ 0.36
COL9A3-206ENST00000466532 H3BML4 177 aa17.28■□□□□ 0.36
COL9A3-206ENST00000466532 PLIN3O60664 434 aa17.28■□□□□ 0.36
COL9A3-206ENST00000466532 SEC22BO75396 215 aa17.28■□□□□ 0.36
COL9A3-206ENST00000466532 UROSP10746 265 aa17.28■□□□□ 0.36
COL9A3-206ENST00000466532 SUCLG1P53597 346 aaKnown RBP17.28■□□□□ 0.36
COL9A3-206ENST00000466532 TPD52P55327 224 aaPredicted RBP17.28■□□□□ 0.36
COL9A3-206ENST00000466532 DNAJB13P59910 316 aa17.28■□□□□ 0.36
COL9A3-206ENST00000466532 SIRPAP78324 504 aa17.28■□□□□ 0.36
COL9A3-206ENST00000466532 FAM27E3Q08E93 113 aa17.28■□□□□ 0.36
COL9A3-206ENST00000466532 SH2D5Q6ZV89 423 aa17.28■□□□□ 0.36
COL9A3-206ENST00000466532 MARCH3Q86UD3 253 aa17.28■□□□□ 0.36
COL9A3-206ENST00000466532 DUSP19Q8WTR2 217 aa17.28■□□□□ 0.36
COL9A3-206ENST00000466532 FIG4Q92562 907 aa17.28■□□□□ 0.36
COL9A3-206ENST00000466532 C1GALT1C1Q96EU7 318 aa17.28■□□□□ 0.36
COL9A3-206ENST00000466532 EGLN2Q96KS0 407 aa17.28■□□□□ 0.36
COL9A3-206ENST00000466532 FAM111AQ96PZ2 611 aa17.28■□□□□ 0.36
COL9A3-206ENST00000466532 PINK1Q9BXM7 581 aa17.28■□□□□ 0.36
COL9A3-206ENST00000466532 C3orf14Q9HBI5 128 aa17.28■□□□□ 0.36
COL9A3-206ENST00000466532 OR2M5A3KFT3 312 aa17.27■□□□□ 0.36
COL9A3-206ENST00000466532 LINC01387J3KSC0 135 aa17.27■□□□□ 0.36
COL9A3-206ENST00000466532 FOSL1P15407 271 aa17.27■□□□□ 0.36
COL9A3-206ENST00000466532 GABRA3P34903 492 aa17.27■□□□□ 0.36
COL9A3-206ENST00000466532 CCT5P48643 541 aa17.27■□□□□ 0.36
COL9A3-206ENST00000466532 HSPB3Q12988 150 aa17.27■□□□□ 0.36
COL9A3-206ENST00000466532 CLEC6AQ6EIG7 209 aa17.27■□□□□ 0.36
COL9A3-206ENST00000466532 ZNF551Q7Z340 670 aaPredicted RBP17.27■□□□□ 0.36
COL9A3-206ENST00000466532 BTLAQ7Z6A9 289 aa17.27■□□□□ 0.36
COL9A3-206ENST00000466532 WFDC11Q8NEX6 87 aa17.27■□□□□ 0.36
COL9A3-206ENST00000466532 GFM2Q969S9 779 aaKnown RBP17.27■□□□□ 0.36
COL9A3-206ENST00000466532 PGM2Q96G03 612 aa17.27■□□□□ 0.36
COL9A3-206ENST00000466532 METTL2AQ96IZ6 378 aaKnown RBP17.27■□□□□ 0.36
COL9A3-206ENST00000466532 PIGQQ9BRB3 760 aa17.27■□□□□ 0.36
COL9A3-206ENST00000466532 TBL1XR1Q9BZK7 514 aa17.27■□□□□ 0.36
COL9A3-206ENST00000466532 OPN3Q9H1Y3 402 aaPredicted RBP17.27■□□□□ 0.36
COL9A3-206ENST00000466532 C12orf65Q9H3J6 166 aaKnown RBP17.27■□□□□ 0.36
COL9A3-206ENST00000466532 GSX1Q9H4S2 264 aaPredicted RBP17.27■□□□□ 0.36
COL9A3-206ENST00000466532 NEUROD4Q9HD90 331 aa17.27■□□□□ 0.36
COL9A3-206ENST00000466532 EQTNQ9NQ60 294 aa17.27■□□□□ 0.36
COL9A3-206ENST00000466532 OXSMQ9NWU1 459 aa17.27■□□□□ 0.36
COL9A3-206ENST00000466532 CCL27Q9Y4X3 112 aa17.27■□□□□ 0.36
COL9A3-206ENST00000466532 DSCAMO60469 2012 aa17.26■□□□□ 0.35
COL9A3-206ENST00000466532 RAI1Q7Z5J4 1906 aaPredicted RBP17.26■□□□□ 0.35
COL9A3-206ENST00000466532 GXYLT2A0PJZ3 443 aa17.26■□□□□ 0.35
COL9A3-206ENST00000466532 TTC36A6NLP5 189 aa17.26■□□□□ 0.35
COL9A3-206ENST00000466532 PDPK1O15530 556 aa17.26■□□□□ 0.35
COL9A3-206ENST00000466532 GMFGO60234 142 aa17.26■□□□□ 0.35
COL9A3-206ENST00000466532 TNFRSF21O75509 655 aa17.26■□□□□ 0.35
COL9A3-206ENST00000466532 KCNH1O95259 989 aa17.26■□□□□ 0.35
COL9A3-206ENST00000466532 UTS2O95399 124 aa17.26■□□□□ 0.35
COL9A3-206ENST00000466532 ANGPTL1O95841 491 aa17.26■□□□□ 0.35
COL9A3-206ENST00000466532 SHBGP04278 402 aa17.26■□□□□ 0.35
COL9A3-206ENST00000466532 IFI6P09912 130 aa17.26■□□□□ 0.35
COL9A3-206ENST00000466532 CPA3P15088 417 aa17.26■□□□□ 0.35
COL9A3-206ENST00000466532 CD53P19397 219 aa17.26■□□□□ 0.35
COL9A3-206ENST00000466532 PRPH2P23942 346 aa17.26■□□□□ 0.35
COL9A3-206ENST00000466532 CRHR1P34998 444 aa17.26■□□□□ 0.35
COL9A3-206ENST00000466532 GPC1P35052 558 aa17.26■□□□□ 0.35
COL9A3-206ENST00000466532 CD79BP40259 229 aa17.26■□□□□ 0.35
COL9A3-206ENST00000466532 KIR2DL2P43627 348 aaPredicted RBP17.26■□□□□ 0.35
COL9A3-206ENST00000466532 CLDN20P56880 219 aa17.26■□□□□ 0.35
COL9A3-206ENST00000466532 C17orf67Q0P5P2 114 aa17.26■□□□□ 0.35
COL9A3-206ENST00000466532 KIAA0040Q15053 153 aa17.26■□□□□ 0.35
COL9A3-206ENST00000466532 ANKRD26P1Q6NSI1 321 aa17.26■□□□□ 0.35
COL9A3-206ENST00000466532 PIK3R3Q92569 461 aa17.26■□□□□ 0.35
COL9A3-206ENST00000466532 ZNF845Q96IR2 970 aaPredicted RBP17.26■□□□□ 0.35
COL9A3-206ENST00000466532 LRTM1Q9HBL6 345 aa17.26■□□□□ 0.35
COL9A3-206ENST00000466532 KLHL28Q9NXS3 571 aa17.26■□□□□ 0.35
COL9A3-206ENST00000466532 C6orf203Q9P0P8 240 aaPredicted RBP17.26■□□□□ 0.35
COL9A3-206ENST00000466532 PTGDR2Q9Y5Y4 395 aa17.26■□□□□ 0.35
COL9A3-206ENST00000466532 SMIM23A6NLE4 172 aa17.25■□□□□ 0.35
COL9A3-206ENST00000466532 SLC28A1O00337 649 aa17.25■□□□□ 0.35
COL9A3-206ENST00000466532 COPEO14579 308 aa17.25■□□□□ 0.35
COL9A3-206ENST00000466532 RGS14O43566 566 aa17.25■□□□□ 0.35
COL9A3-206ENST00000466532 IGKV1D-16P01601 117 aa17.25■□□□□ 0.35
COL9A3-206ENST00000466532 PRPS2P11908 318 aa17.25■□□□□ 0.35
COL9A3-206ENST00000466532 PCYT1AP49585 367 aa17.25■□□□□ 0.35
COL9A3-206ENST00000466532 RPS3AP61247 264 aaKnown RBP17.25■□□□□ 0.35
COL9A3-206ENST00000466532 PRR5P85299 388 aa17.25■□□□□ 0.35
COL9A3-206ENST00000466532 PON3Q15166 354 aa17.25■□□□□ 0.35
COL9A3-206ENST00000466532 GRAMD1BQ3KR37 738 aa17.25■□□□□ 0.35
COL9A3-206ENST00000466532 GLYR1Q49A26 553 aaPredicted RBP17.25■□□□□ 0.35
COL9A3-206ENST00000466532 LIPMQ5VYY2 423 aa17.25■□□□□ 0.35
COL9A3-206ENST00000466532 ZNF474Q6S9Z5 364 aaPredicted RBP17.25■□□□□ 0.35
COL9A3-206ENST00000466532 FNDC9Q8TBE3 224 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms