RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 MORN4Q8NDC4 146 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 GPR151Q8TDV0 419 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 GAB3Q8WWW8 586 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 IL4I1Q96RQ9 567 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 PRTFDC1Q9NRG1 225 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 SATB2Q9UPW6 733 aa16.99■□□□□ 0.31
COL9A3-205ENST00000466192 HRKO00198 91 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 CDK1P06493 297 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 TNNI3P19429 210 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 GPR3P46089 330 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 HSD11B2P80365 405 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 ZXDAP98168 799 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 TEKQ02763 1124 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 OCA2Q04671 838 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 GRM7Q14831 915 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 PMS2CLQ68D20 193 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 ZNF836Q6ZNA1 936 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 PLXDC1Q8IUK5 500 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 GALNT12Q8IXK2 581 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 PEX5LQ8IYB4 626 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 OR51Q1Q8NH59 317 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 ALOXE3Q9BYJ1 711 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 FKBP14Q9NWM8 211 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 IFT52Q9Y366 437 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 FRYLO94915 3013 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 GXYLT2A0PJZ3 443 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 AGAP5A6NIR3 686 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 TTC36A6NLP5 189 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 STSP08842 583 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 MAOAP21397 527 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 CD1CP29017 333 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 GABRA3P34903 492 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 TRHRP34981 398 aaPredicted RBP16.98■□□□□ 0.31
COL9A3-205ENST00000466192 LSM3P62310 102 aaKnown RBP16.98■□□□□ 0.31
COL9A3-205ENST00000466192 ST3GAL4Q11206 333 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 NR1D2Q14995 579 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 MAPK14Q16539 360 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 MEX3DQ86XN8 651 aaKnown RBP16.98■□□□□ 0.31
COL9A3-205ENST00000466192 STX19Q8N4C7 294 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 B3GNT7Q8NFL0 401 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 ADAMTS18Q8TE60 1221 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 HOXB13Q92826 284 aaPredicted RBP16.98■□□□□ 0.31
COL9A3-205ENST00000466192 RIT1Q92963 219 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 YIPF6Q96EC8 236 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 RBM18Q96H35 190 aaKnown RBP16.98■□□□□ 0.31
COL9A3-205ENST00000466192 GPA33Q99795 319 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 SAP130Q9H0E3 1048 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 TRIM45Q9H8W5 580 aaPredicted RBP16.98■□□□□ 0.31
COL9A3-205ENST00000466192 KLHL28Q9NXS3 571 aa16.98■□□□□ 0.31
COL9A3-205ENST00000466192 FER1L5A0AVI2 2057 aa16.97■□□□□ 0.31
COL9A3-205ENST00000466192 BLACEA4D250 179 aa16.97■□□□□ 0.31
COL9A3-205ENST00000466192 TMEM150CB9EJG8 249 aa16.97■□□□□ 0.31
COL9A3-205ENST00000466192 H0YIG0 161 aa16.97■□□□□ 0.31
COL9A3-205ENST00000466192 CLDN4O14493 209 aa16.97■□□□□ 0.31
COL9A3-205ENST00000466192 MPZL2O60487 215 aa16.97■□□□□ 0.31
COL9A3-205ENST00000466192 STX11O75558 287 aa16.97■□□□□ 0.31
COL9A3-205ENST00000466192 OR2B3O76000 313 aa16.97■□□□□ 0.31
COL9A3-205ENST00000466192 ATXN8OSP0DMR3 200 aa16.97■□□□□ 0.31
COL9A3-205ENST00000466192 GNSP15586 552 aa16.97■□□□□ 0.31
COL9A3-205ENST00000466192 ZNF155Q12901 538 aaPredicted RBP16.97■□□□□ 0.31
COL9A3-205ENST00000466192 FIGNL1Q6PIW4 674 aa16.97■□□□□ 0.31
COL9A3-205ENST00000466192 WDR5BQ86VZ2 330 aa16.97■□□□□ 0.31
COL9A3-205ENST00000466192 GATAD2AQ86YP4 633 aa16.97■□□□□ 0.31
COL9A3-205ENST00000466192 ZNF619Q8N2I2 560 aa16.97■□□□□ 0.31
COL9A3-205ENST00000466192 CAPN10Q9HC96 672 aa16.97■□□□□ 0.31
COL9A3-205ENST00000466192 PRMT8Q9NR22 394 aaPredicted RBP16.97■□□□□ 0.31
COL9A3-205ENST00000466192 KCNE5Q9UJ90 142 aa16.97■□□□□ 0.31
COL9A3-205ENST00000466192 NTNG1Q9Y2I2 539 aa16.97■□□□□ 0.31
COL9A3-205ENST00000466192 MAU2Q9Y6X3 613 aa16.97■□□□□ 0.31
COL9A3-205ENST00000466192 MN1Q10571 1320 aaPredicted RBP16.97■□□□□ 0.31
COL9A3-205ENST00000466192 TECTAO75443 2155 aa16.97■□□□□ 0.31
COL9A3-205ENST00000466192 A0A087WUU8 490 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 HYAL3O43820 417 aaPredicted RBP16.96■□□□□ 0.31
COL9A3-205ENST00000466192 CYP7B1O75881 506 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 TP53P04637 393 aaPredicted RBP16.96■□□□□ 0.31
COL9A3-205ENST00000466192 CCNYL3P0C7X3 344 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 RPS4Y1P22090 263 aaKnown RBP16.96■□□□□ 0.31
COL9A3-205ENST00000466192 SSTR4P31391 388 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 RGS8P57771 180 aaPredicted RBP16.96■□□□□ 0.31
COL9A3-205ENST00000466192 EEF1A1P68104 462 aaKnown RBP16.96■□□□□ 0.31
COL9A3-205ENST00000466192 GPLD1P80108 840 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 LARS2Q15031 903 aaKnown RBP16.96■□□□□ 0.31
COL9A3-205ENST00000466192 P2RY8Q86VZ1 359 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 CARFQ8N187 725 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 DIO2Q92813 273 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 FSCN3Q9NQT6 498 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 CUTCQ9NTM9 273 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 SEMA4GQ9NTN9 838 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 CLN6Q9NWW5 311 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 PILRBQ9UKJ0 227 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 ZNF232Q9UNY5 417 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 NPIPA5A0A0B4J1W7 369 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 A8MU76 341 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 NPIPA7E9PJI5 369 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 PEX12O00623 359 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 NKX2-2O95096 273 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 GABARAPO95166 117 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 NTN1O95631 604 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 THBS1P07996 1170 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 NPIPA8P0DM63 369 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms