RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 CCL11P51671 97 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 CRISP3P54108 245 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 PNLIPRP2P54317 469 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 NRG3P56975 720 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 CXADRP78310 365 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 CHRNEQ04844 493 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 MFAP5Q13361 173 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 VEZF1Q14119 521 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 RPS26P11Q5JNZ5 115 aaPredicted RBP10.25□□□□□ -0.77
VCP-204ENST00000466100 DESI1Q6ICB0 168 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 REEP3Q6NUK4 255 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 BORAQ6PGQ7 559 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 ISLR2Q6UXK2 745 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 CCDC80Q76M96 950 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 IFNEQ86WN2 208 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 HPS6Q86YV9 775 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 SLC30A8Q8IWU4 369 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 ULK2Q8IYT8 1036 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 FBXW8Q8N3Y1 598 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 HIPK4Q8NE63 616 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 EFHD2Q96C19 240 aaPredicted RBP10.25□□□□□ -0.77
VCP-204ENST00000466100 NTNG2Q96CW9 530 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 SPACA9Q96E40 222 aaPredicted RBP10.25□□□□□ -0.77
VCP-204ENST00000466100 CRELD1Q96HD1 420 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 COL21A1Q96P44 957 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 ADOQ96SZ5 270 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 SMAD5Q99717 465 aaKnown RBP10.25□□□□□ -0.77
VCP-204ENST00000466100 RSPO3Q9BXY4 272 aaPredicted RBP10.25□□□□□ -0.77
VCP-204ENST00000466100 RNF32Q9H0A6 362 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 PRORYQ9H606 182 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 ZBTB20Q9HC78 741 aaPredicted RBP10.25□□□□□ -0.77
VCP-204ENST00000466100 POLE3Q9NRF9 147 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 CALML5Q9NZT1 146 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 FLRT3Q9NZU0 649 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 SUCOQ9UBS9 1254 aaKnown RBP10.25□□□□□ -0.77
VCP-204ENST00000466100 KCNE5Q9UJ90 142 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 ZMIZ1Q9ULJ6 1067 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 SPTA1P02549 2419 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 SMG1Q96Q15 3661 aaKnown RBP10.24□□□□□ -0.77
VCP-204ENST00000466100 A0A0G2JPF8 293 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 HNRNPCL2B2RXH8 293 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 HNRNPCL3B7ZW38 293 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 ABCB7O75027 752 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 ICOSLGO75144 302 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 ITGB2P05107 769 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 NGFRP08138 427 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 HNRNPCL4P0DMR1 293 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 GGT1P19440 569 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 ME2P23368 584 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 MSX2P35548 267 aaPredicted RBP10.24□□□□□ -0.77
VCP-204ENST00000466100 TMED10P49755 219 aaKnown RBP10.24□□□□□ -0.77
VCP-204ENST00000466100 HLCSP50747 726 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 FBXW4P57775 412 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 TUBA3CQ13748 450 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 GNA13Q14344 377 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 MAPK14Q16539 360 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 GPAT3Q53EU6 434 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 ABHD17BQ5VST6 288 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 AGAP7PQ5VUJ5 663 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 IRAK1BP1Q5VVH5 260 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 TMEM81Q6P7N7 255 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 TUBA3EQ6PEY2 450 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 OPN5Q6U736 354 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 GPALPP1Q8IXQ4 340 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 DND1Q8IYX4 353 aaKnown RBP10.24□□□□□ -0.77
VCP-204ENST00000466100 ZNF619Q8N2I2 560 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 BBS10Q8TAM1 723 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 ASB15Q8WXK1 588 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 PMM1Q92871 262 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 ZG16BQ96DA0 208 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 AGAP4Q96P64 663 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 G6PC3Q9BUM1 346 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 QRSL1Q9H0R6 528 aaKnown RBP10.24□□□□□ -0.77
VCP-204ENST00000466100 MMADHCQ9H3L0 296 aaPredicted RBP10.24□□□□□ -0.77
VCP-204ENST00000466100 EGFL7Q9UHF1 273 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 SLC7A8Q9UHI5 535 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 TEKT2Q9UIF3 430 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 MKLN1Q9UL63 735 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 ANGPT4Q9Y264 503 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 WDR45Q9Y484 360 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 PCDHGA9Q9Y5G4 932 aaKnown RBP10.24□□□□□ -0.77
VCP-204ENST00000466100 GPC6Q9Y625 555 aaPredicted RBP10.24□□□□□ -0.77
VCP-204ENST00000466100 CHCHD2Q9Y6H1 151 aaPredicted RBP10.24□□□□□ -0.77
VCP-204ENST00000466100 NCKAP5O14513 1909 aa10.24□□□□□ -0.77
VCP-204ENST00000466100 NPIPA5A0A0B4J1W7 369 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 TMEM247A6NEH6 219 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 ERICH4A6NGS2 130 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 AGAP5A6NIR3 686 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 TMEM229AB2RXF0 380 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 NPIPA7E9PJI5 369 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 ACOT8O14734 319 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 ARPC2O15144 300 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 FADS1O60427 444 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 REM1O75628 298 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 UGT2B17O75795 530 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 NEURL1O76050 574 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 UTS2O95399 124 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 WDPCPO95876 746 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 FREM3P0C091 2139 aa10.23□□□□□ -0.77
VCP-204ENST00000466100 NPIPA8P0DM63 369 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms