RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 TMEM114B3SHH9 223 aa19.75■□□□□ 0.75
LIME1-203ENST00000465591 FAM47E-STBD1D6RA91 191 aa19.75■□□□□ 0.75
LIME1-203ENST00000465591 CPN1P15169 458 aa19.75■□□□□ 0.75
LIME1-203ENST00000465591 BMP5P22003 454 aa19.75■□□□□ 0.75
LIME1-203ENST00000465591 DPP4P27487 766 aa19.75■□□□□ 0.75
LIME1-203ENST00000465591 LHX2P50458 406 aa19.75■□□□□ 0.75
LIME1-203ENST00000465591 SRYQ05066 204 aa19.75■□□□□ 0.75
LIME1-203ENST00000465591 SNTB1Q13884 538 aaKnown RBP19.75■□□□□ 0.75
LIME1-203ENST00000465591 SZRD1Q7Z422 152 aa19.75■□□□□ 0.75
LIME1-203ENST00000465591 MARCH3Q86UD3 253 aa19.75■□□□□ 0.75
LIME1-203ENST00000465591 HOMEZQ8IX15 550 aa19.75■□□□□ 0.75
LIME1-203ENST00000465591 ZNF781Q8N8C0 355 aa19.75■□□□□ 0.75
LIME1-203ENST00000465591 C9orf106Q8NAJ2 232 aa19.75■□□□□ 0.75
LIME1-203ENST00000465591 SLC16A11Q8NCK7 471 aa19.75■□□□□ 0.75
LIME1-203ENST00000465591 GPR151Q8TDV0 419 aa19.75■□□□□ 0.75
LIME1-203ENST00000465591 OTUB1Q96FW1 271 aaPredicted RBP19.75■□□□□ 0.75
LIME1-203ENST00000465591 CENPHQ9H3R5 247 aa19.75■□□□□ 0.75
LIME1-203ENST00000465591 FAM120CQ9NX05 1096 aaKnown RBP19.75■□□□□ 0.75
LIME1-203ENST00000465591 MED11Q9P086 117 aa19.75■□□□□ 0.75
LIME1-203ENST00000465591 PPP4R1LQ9P1A2 415 aa19.75■□□□□ 0.75
LIME1-203ENST00000465591 DKKL1Q9UK85 242 aa19.75■□□□□ 0.75
LIME1-203ENST00000465591 ABCG2Q9UNQ0 655 aa19.75■□□□□ 0.75
LIME1-203ENST00000465591 OTOGQ6ZRI0 2925 aa19.75■□□□□ 0.75
LIME1-203ENST00000465591 MBD3L4A6NDZ8 208 aaPredicted RBP19.74■□□□□ 0.75
LIME1-203ENST00000465591 MBD3L3A6NE82 208 aaPredicted RBP19.74■□□□□ 0.75
LIME1-203ENST00000465591 MBD3L5A6NJ08 208 aaPredicted RBP19.74■□□□□ 0.75
LIME1-203ENST00000465591 UTS2O95399 124 aa19.74■□□□□ 0.75
LIME1-203ENST00000465591 HSPA4LO95757 839 aa19.74■□□□□ 0.75
LIME1-203ENST00000465591 SERPINE1P05121 402 aa19.74■□□□□ 0.75
LIME1-203ENST00000465591 MAPK1P28482 360 aa19.74■□□□□ 0.75
LIME1-203ENST00000465591 HPCAL1P37235 193 aa19.74■□□□□ 0.75
LIME1-203ENST00000465591 DUSP5Q16690 384 aa19.74■□□□□ 0.75
LIME1-203ENST00000465591 GRAMD1BQ3KR37 738 aa19.74■□□□□ 0.75
LIME1-203ENST00000465591 EXOSC6Q5RKV6 272 aaKnown RBP19.74■□□□□ 0.75
LIME1-203ENST00000465591 MFSD12Q6NUT3 480 aa19.74■□□□□ 0.75
LIME1-203ENST00000465591 LRIG3Q6UXM1 1119 aa19.74■□□□□ 0.75
LIME1-203ENST00000465591 R3HCC1LQ7Z5L2 792 aaKnown RBP19.74■□□□□ 0.75
LIME1-203ENST00000465591 ZAR1Q86SH2 424 aa19.74■□□□□ 0.75
LIME1-203ENST00000465591 FNDC5Q8NAU1 212 aa19.74■□□□□ 0.75
LIME1-203ENST00000465591 OR4K17Q8NGC6 315 aa19.74■□□□□ 0.75
LIME1-203ENST00000465591 MBD3L2Q8NHZ7 208 aaPredicted RBP19.74■□□□□ 0.75
LIME1-203ENST00000465591 PPP1R14CQ8TAE6 165 aa19.74■□□□□ 0.75
LIME1-203ENST00000465591 ZPLD1Q8TCW7 415 aa19.74■□□□□ 0.75
LIME1-203ENST00000465591 SLC9A6Q92581 669 aa19.74■□□□□ 0.75
LIME1-203ENST00000465591 TUBGCP3Q96CW5 907 aa19.74■□□□□ 0.75
LIME1-203ENST00000465591 FAM120BQ96EK7 910 aaKnown RBP19.74■□□□□ 0.75
LIME1-203ENST00000465591 SFXN2Q96NB2 322 aa19.74■□□□□ 0.75
LIME1-203ENST00000465591 MS4A4EQ96PG1 132 aa19.74■□□□□ 0.75
LIME1-203ENST00000465591 SORT1Q99523 831 aa19.74■□□□□ 0.75
LIME1-203ENST00000465591 YIPF4Q9BSR8 244 aa19.74■□□□□ 0.75
LIME1-203ENST00000465591 FBXO34Q9NWN3 711 aa19.74■□□□□ 0.75
LIME1-203ENST00000465591 MRPS18CQ9Y3D5 142 aaKnown RBP19.74■□□□□ 0.75
LIME1-203ENST00000465591 ANKRD17O75179 2603 aaKnown RBP19.74■□□□□ 0.75
LIME1-203ENST00000465591 AKAP6Q13023 2319 aa19.74■□□□□ 0.75
LIME1-203ENST00000465591 TTC36A6NLP5 189 aa19.73■□□□□ 0.75
LIME1-203ENST00000465591 BIRC5O15392 142 aa19.73■□□□□ 0.75
LIME1-203ENST00000465591 EMC8O43402 210 aa19.73■□□□□ 0.75
LIME1-203ENST00000465591 AGFG1P52594 562 aaKnown RBP19.73■□□□□ 0.75
LIME1-203ENST00000465591 CLDN18P56856 261 aa19.73■□□□□ 0.75
LIME1-203ENST00000465591 ABCE1P61221 599 aaKnown RBP19.73■□□□□ 0.75
LIME1-203ENST00000465591 MLC1Q15049 377 aa19.73■□□□□ 0.75
LIME1-203ENST00000465591 PDCD2Q16342 344 aaPredicted RBP19.73■□□□□ 0.75
LIME1-203ENST00000465591 ADGRE4PQ86SQ3 457 aa19.73■□□□□ 0.75
LIME1-203ENST00000465591 CDRT4Q8N9R6 151 aa19.73■□□□□ 0.75
LIME1-203ENST00000465591 CEP70Q8NHQ1 597 aa19.73■□□□□ 0.75
LIME1-203ENST00000465591 DUSP19Q8WTR2 217 aa19.73■□□□□ 0.75
LIME1-203ENST00000465591 PPP1R36Q96LQ0 422 aa19.73■□□□□ 0.75
LIME1-203ENST00000465591 SH3GL2Q99962 352 aa19.73■□□□□ 0.75
LIME1-203ENST00000465591 CALHM2Q9HA72 323 aa19.73■□□□□ 0.75
LIME1-203ENST00000465591 MCCC2Q9HCC0 563 aa19.73■□□□□ 0.75
LIME1-203ENST00000465591 L3MBTL1Q9Y468 752 aa19.73■□□□□ 0.75
LIME1-203ENST00000465591 H0Y3Z8 333 aa19.72■□□□□ 0.75
LIME1-203ENST00000465591 TM9SF1O15321 606 aa19.72■□□□□ 0.75
LIME1-203ENST00000465591 KCNH1O95259 989 aa19.72■□□□□ 0.75
LIME1-203ENST00000465591 IL2RAP01589 272 aa19.72■□□□□ 0.75
LIME1-203ENST00000465591 G6PDP11413 515 aa19.72■□□□□ 0.75
LIME1-203ENST00000465591 ZNF708P17019 499 aa19.72■□□□□ 0.75
LIME1-203ENST00000465591 BGNP21810 368 aa19.72■□□□□ 0.75
LIME1-203ENST00000465591 GCKP35557 465 aa19.72■□□□□ 0.75
LIME1-203ENST00000465591 DSCR4P56555 118 aaPredicted RBP19.72■□□□□ 0.75
LIME1-203ENST00000465591 FIGNL1Q6PIW4 674 aa19.72■□□□□ 0.75
LIME1-203ENST00000465591 ENPP6Q6UWR7 440 aa19.72■□□□□ 0.75
LIME1-203ENST00000465591 RIMKLAQ8IXN7 391 aa19.72■□□□□ 0.75
LIME1-203ENST00000465591 FAM110BQ8TC76 370 aa19.72■□□□□ 0.75
LIME1-203ENST00000465591 COQ8BQ96D53 544 aa19.72■□□□□ 0.75
LIME1-203ENST00000465591 C3orf14Q9HBI5 128 aa19.72■□□□□ 0.75
LIME1-203ENST00000465591 MRTO4Q9UKD2 239 aaKnown RBP19.72■□□□□ 0.75
LIME1-203ENST00000465591 A0A1W2PRB8 838 aa19.71■□□□□ 0.75
LIME1-203ENST00000465591 CLCA1A8K7I4 914 aa19.71■□□□□ 0.75
LIME1-203ENST00000465591 DVL2O14641 736 aa19.71■□□□□ 0.75
LIME1-203ENST00000465591 KCNK2O95069 426 aa19.71■□□□□ 0.75
LIME1-203ENST00000465591 CHMP24386 653 aa19.71■□□□□ 0.75
LIME1-203ENST00000465591 FOXF2Q12947 444 aa19.71■□□□□ 0.75
LIME1-203ENST00000465591 RCAN2Q14206 197 aa19.71■□□□□ 0.75
LIME1-203ENST00000465591 SF3B4Q15427 424 aaKnown RBP eCLIP19.71■□□□□ 0.757e-10■■■■□ 22.8
LIME1-203ENST00000465591 CPTPQ5TA50 214 aa19.71■□□□□ 0.75
LIME1-203ENST00000465591 OR5M1Q8NGP8 315 aa19.71■□□□□ 0.75
LIME1-203ENST00000465591 OR4C3Q8NH37 302 aa19.71■□□□□ 0.75
LIME1-203ENST00000465591 CXorf36Q9H7Y0 433 aa19.71■□□□□ 0.75
LIME1-203ENST00000465591 KCNK9Q9NPC2 374 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms