RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ZNF677Q86XU0 584 aa4.15□□□□□ -1.75
PTCD3-205ENST00000464541 C9orf40Q8IXQ3 194 aa4.15□□□□□ -1.75
PTCD3-205ENST00000464541 CCDC36Q8IYA8 594 aa4.15□□□□□ -1.75
PTCD3-205ENST00000464541 ZNF540Q8NDQ6 660 aa4.15□□□□□ -1.75
PTCD3-205ENST00000464541 CTNNBL1Q8WYA6 563 aaPredicted RBP4.15□□□□□ -1.75
PTCD3-205ENST00000464541 TMEM186Q96B77 213 aa4.15□□□□□ -1.75
PTCD3-205ENST00000464541 ZNF702PQ9H963 129 aa4.15□□□□□ -1.75
PTCD3-205ENST00000464541 SYTL2Q9HCH5 934 aa4.15□□□□□ -1.75
PTCD3-205ENST00000464541 DUS2Q9NX74 493 aaKnown RBP4.15□□□□□ -1.75
PTCD3-205ENST00000464541 GALPQ9UBC7 116 aa4.15□□□□□ -1.75
PTCD3-205ENST00000464541 RABL2AQ9UBK7 228 aaPredicted RBP4.15□□□□□ -1.75
PTCD3-205ENST00000464541 GHRLQ9UBU3 117 aa4.15□□□□□ -1.75
PTCD3-205ENST00000464541 PDE10AQ9Y233 779 aa4.15□□□□□ -1.75
PTCD3-205ENST00000464541 EXOSC1Q9Y3B2 195 aaKnown RBP4.15□□□□□ -1.75
PTCD3-205ENST00000464541 USP6P35125 1406 aa4.14□□□□□ -1.75
PTCD3-205ENST00000464541 H3BTX0 84 aa4.14□□□□□ -1.75
PTCD3-205ENST00000464541 TM9SF1O15321 606 aa4.14□□□□□ -1.75
PTCD3-205ENST00000464541 RALAP11233 206 aa4.14□□□□□ -1.75
PTCD3-205ENST00000464541 PTPN6P29350 595 aa4.14□□□□□ -1.75
PTCD3-205ENST00000464541 GPC3P51654 580 aa4.14□□□□□ -1.75
PTCD3-205ENST00000464541 RPS6P62753 249 aaKnown RBP4.14□□□□□ -1.75
PTCD3-205ENST00000464541 MRPS6P82932 125 aaKnown RBP4.14□□□□□ -1.75
PTCD3-205ENST00000464541 KLHL30Q0D2K2 578 aa4.14□□□□□ -1.75
PTCD3-205ENST00000464541 CCDC40Q4G0X9 1142 aa4.14□□□□□ -1.75
PTCD3-205ENST00000464541 SBK1Q52WX2 424 aa4.14□□□□□ -1.75
PTCD3-205ENST00000464541 NEK5Q6P3R8 708 aa4.14□□□□□ -1.75
PTCD3-205ENST00000464541 ZNF562Q6V9R5 426 aa4.14□□□□□ -1.75
PTCD3-205ENST00000464541 TFAP2EQ6VUC0 442 aa4.14□□□□□ -1.75
PTCD3-205ENST00000464541 HACD2Q6Y1H2 254 aa4.14□□□□□ -1.75
PTCD3-205ENST00000464541 MCOLN2Q8IZK6 566 aa4.14□□□□□ -1.75
PTCD3-205ENST00000464541 HDDC3Q8N4P3 179 aa4.14□□□□□ -1.75
PTCD3-205ENST00000464541 ARFGAP2Q8N6H7 521 aa4.14□□□□□ -1.75
PTCD3-205ENST00000464541 DENND6BQ8NEG7 585 aa4.14□□□□□ -1.75
PTCD3-205ENST00000464541 OR52E1Q8NGJ3 308 aa4.14□□□□□ -1.75
PTCD3-205ENST00000464541 ZNF606Q8WXB4 792 aa4.14□□□□□ -1.75
PTCD3-205ENST00000464541 SLC25A36Q96CQ1 311 aa4.14□□□□□ -1.75
PTCD3-205ENST00000464541 TM2D1Q9BX74 207 aa4.14□□□□□ -1.75
PTCD3-205ENST00000464541 ACTR3BQ9P1U1 418 aa4.14□□□□□ -1.75
PTCD3-205ENST00000464541 ATAD2BQ9ULI0 1458 aa4.13□□□□□ -1.75
PTCD3-205ENST00000464541 ALOX15BO15296 676 aa4.13□□□□□ -1.75
PTCD3-205ENST00000464541 BCAS2O75934 225 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-205ENST00000464541 IGFBP1P08833 259 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-205ENST00000464541 CYP11B1P15538 503 aa4.13□□□□□ -1.75
PTCD3-205ENST00000464541 SH3BGRP55822 239 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-205ENST00000464541 HTD2P86397 168 aa4.13□□□□□ -1.75
PTCD3-205ENST00000464541 RFTN1Q14699 578 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-205ENST00000464541 PRR4Q16378 134 aa4.13□□□□□ -1.75
PTCD3-205ENST00000464541 CYP51A1Q16850 503 aa4.13□□□□□ -1.75
PTCD3-205ENST00000464541 DMKNQ6E0U4 476 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-205ENST00000464541 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
PTCD3-205ENST00000464541 C1orf186Q6ZWK4 172 aa4.13□□□□□ -1.75
PTCD3-205ENST00000464541 C14orf178Q8N769 122 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-205ENST00000464541 ZNF564Q8TBZ8 553 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-205ENST00000464541 DQX1Q8TE96 717 aaKnown RBP4.13□□□□□ -1.75
PTCD3-205ENST00000464541 NSMCE2Q96MF7 247 aa4.13□□□□□ -1.75
PTCD3-205ENST00000464541 KRT23Q9C075 422 aa4.13□□□□□ -1.75
PTCD3-205ENST00000464541 ABCG8Q9H221 673 aa4.13□□□□□ -1.75
PTCD3-205ENST00000464541 ANO10Q9NW15 660 aa4.13□□□□□ -1.75
PTCD3-205ENST00000464541 CLIP2Q9UDT6 1046 aa4.13□□□□□ -1.75
PTCD3-205ENST00000464541 CFAP65Q6ZU64 1925 aaKnown RBP4.13□□□□□ -1.75
PTCD3-205ENST00000464541 TTC26A0AVF1 554 aa4.12□□□□□ -1.75
PTCD3-205ENST00000464541 CFAP73A6NFT4 308 aa4.12□□□□□ -1.75
PTCD3-205ENST00000464541 H3BMH7 237 aa4.12□□□□□ -1.75
PTCD3-205ENST00000464541 IMPA2O14732 288 aa4.12□□□□□ -1.75
PTCD3-205ENST00000464541 SSX5O60225 188 aa4.12□□□□□ -1.75
PTCD3-205ENST00000464541 PALMO75781 387 aa4.12□□□□□ -1.75
PTCD3-205ENST00000464541 DCST2Q5T1A1 773 aa4.12□□□□□ -1.75
PTCD3-205ENST00000464541 MOB1BQ7L9L4 216 aa4.12□□□□□ -1.75
PTCD3-205ENST00000464541 KRTAP11-1Q8IUC1 163 aa4.12□□□□□ -1.75
PTCD3-205ENST00000464541 ZBTB44Q8NCP5 570 aa4.12□□□□□ -1.75
PTCD3-205ENST00000464541 CCDC110Q8TBZ0 833 aa4.12□□□□□ -1.75
PTCD3-205ENST00000464541 SLC13A3Q8WWT9 602 aa4.12□□□□□ -1.75
PTCD3-205ENST00000464541 NCLNQ969V3 563 aa4.12□□□□□ -1.75
PTCD3-205ENST00000464541 NT5C3AQ9H0P0 336 aa4.12□□□□□ -1.75
PTCD3-205ENST00000464541 GLT8D2Q9H1C3 349 aa4.12□□□□□ -1.75
PTCD3-205ENST00000464541 MEPEQ9NQ76 525 aaPredicted RBP4.12□□□□□ -1.75
PTCD3-205ENST00000464541 NOL4O94818 638 aa4.11□□□□□ -1.75
PTCD3-205ENST00000464541 HSPB1P04792 205 aaKnown RBP4.11□□□□□ -1.75
PTCD3-205ENST00000464541 MGMTP16455 207 aa4.11□□□□□ -1.75
PTCD3-205ENST00000464541 PSMB1P20618 241 aaKnown RBP4.11□□□□□ -1.75
PTCD3-205ENST00000464541 SFNP31947 248 aa4.11□□□□□ -1.75
PTCD3-205ENST00000464541 NF2P35240 595 aa4.11□□□□□ -1.75
PTCD3-205ENST00000464541 SLC26A5P58743 744 aa4.11□□□□□ -1.75
PTCD3-205ENST00000464541 GMFBP60983 142 aa4.11□□□□□ -1.75
PTCD3-205ENST00000464541 GAMTQ14353 236 aa4.11□□□□□ -1.75
PTCD3-205ENST00000464541 INAQ16352 499 aa4.11□□□□□ -1.75
PTCD3-205ENST00000464541 DCAF4L1Q3SXM0 396 aa4.11□□□□□ -1.75
PTCD3-205ENST00000464541 C2orf83Q53S99 150 aa4.11□□□□□ -1.75
PTCD3-205ENST00000464541 TMEM110Q86TL2 294 aa4.11□□□□□ -1.75
PTCD3-205ENST00000464541 NEK11Q8NG66 645 aa4.11□□□□□ -1.75
PTCD3-205ENST00000464541 OR2L5Q8NG80 312 aa4.11□□□□□ -1.75
PTCD3-205ENST00000464541 SETD7Q8WTS6 366 aaKnown RBP4.11□□□□□ -1.75
PTCD3-205ENST00000464541 C18orf25Q96B23 403 aaPredicted RBP4.11□□□□□ -1.75
PTCD3-205ENST00000464541 NUS1Q96E22 293 aa4.11□□□□□ -1.75
PTCD3-205ENST00000464541 NMNAT2Q9BZQ4 307 aa4.11□□□□□ -1.75
PTCD3-205ENST00000464541 RPAP3Q9H6T3 665 aaPredicted RBP4.11□□□□□ -1.75
PTCD3-205ENST00000464541 LIN28AQ9H9Z2 209 aaKnown RBP4.11□□□□□ -1.75
PTCD3-205ENST00000464541 TAS2R3Q9NYW6 316 aa4.11□□□□□ -1.75
PTCD3-205ENST00000464541 EXTL2Q9UBQ6 330 aa4.11□□□□□ -1.75
PTCD3-205ENST00000464541 ABCG2Q9UNQ0 655 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms