RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 CLECL1Q8IZS7 167 aa15.57■□□□□ 0.08
VPS52-215ENST00000464425 CDRT4Q8N9R6 151 aa15.57■□□□□ 0.08
VPS52-215ENST00000464425 OR4A15Q8NGL6 344 aa15.57■□□□□ 0.08
VPS52-215ENST00000464425 JADE3Q92613 823 aa15.57■□□□□ 0.08
VPS52-215ENST00000464425 VPS33AQ96AX1 596 aa15.57■□□□□ 0.08
VPS52-215ENST00000464425 MOAP1Q96BY2 351 aa15.57■□□□□ 0.08
VPS52-215ENST00000464425 NTNG2Q96CW9 530 aa15.57■□□□□ 0.08
VPS52-215ENST00000464425 SPDL1Q96EA4 605 aa15.57■□□□□ 0.08
VPS52-215ENST00000464425 TMEM41AQ96HV5 264 aa15.57■□□□□ 0.08
VPS52-215ENST00000464425 ITCHQ96J02 903 aa15.57■□□□□ 0.08
VPS52-215ENST00000464425 FLRT3Q9NZU0 649 aa15.57■□□□□ 0.08
VPS52-215ENST00000464425 FLNBO75369 2602 aaKnown RBP15.57■□□□□ 0.08
VPS52-215ENST00000464425 EXPH5Q8NEV8 1989 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 TRGV5A0A0B4J1U4 118 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 A0A1W2PP18 115 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 WIPF3A6NGB9 483 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 ZG16O60844 167 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 IGHG3P01860 377 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 HMGN2P05204 90 aaKnown RBP15.56■□□□□ 0.08
VPS52-215ENST00000464425 TPOP07202 933 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 ACP2P11117 423 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 ESRRAP11474 423 aaPredicted RBP15.56■□□□□ 0.08
VPS52-215ENST00000464425 TRPC1P48995 793 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 PER3P56645 1201 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 MRPS22P82650 360 aaKnown RBP15.56■□□□□ 0.08
VPS52-215ENST00000464425 KLF10Q13118 480 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 SNTA1Q13424 505 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 TP53BP2Q13625 1128 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 TOMM20Q15388 145 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 VPS26BQ4G0F5 336 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 TIGD2Q4W5G0 525 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 TIGD3Q6B0B8 471 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 TMEM81Q6P7N7 255 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 BHLHB9Q6PI77 547 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 GALNT10Q86SR1 603 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 ANKRD46Q86W74 232 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 CLEC4FQ8N1N0 589 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 SLC16A11Q8NCK7 471 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 OR1J4Q8NGS1 313 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 OR5AK3PQ8NH89 298 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 FAM57AQ8TBR7 257 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 SFXN5Q8TD22 340 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 HOXB13Q92826 284 aaPredicted RBP15.56■□□□□ 0.08
VPS52-215ENST00000464425 RMND5BQ96G75 393 aaPredicted RBP15.56■□□□□ 0.08
VPS52-215ENST00000464425 PSMG3-AS1Q96PY0 264 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 PANX1Q96RD7 426 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 MYLK2Q9H1R3 596 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 SLC6A15Q9H2J7 730 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 SERHLQ9NQF3 203 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 MRTO4Q9UKD2 239 aaKnown RBP15.56■□□□□ 0.08
VPS52-215ENST00000464425 C15orf41Q9Y2V0 281 aa15.56■□□□□ 0.08
VPS52-215ENST00000464425 A1L4Q6 167 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 TTC36A6NLP5 189 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 NR5A2O00482 541 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 NKX2-2O95096 273 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 KCNH1O95259 989 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 CPSF4O95639 269 aaKnown RBP15.55■□□□□ 0.08
VPS52-215ENST00000464425 IL33O95760 270 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 IGKV1D-16P01601 117 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 SNRPB2P08579 225 aaKnown RBP15.55■□□□□ 0.08
VPS52-215ENST00000464425 ALOX5P09917 674 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 UQCRC2P22695 453 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 SOAT1P35610 550 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 MAP3K8P41279 467 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 MAN2A2P49641 1150 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 PRIM2P49643 509 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 LASP1Q14847 261 aaKnown RBP15.55■□□□□ 0.08
VPS52-215ENST00000464425 MAPRE2Q15555 327 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 DUSP5Q16690 384 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 OR5M10Q6IEU7 315 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 ZCCHC12Q6PEW1 402 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 CD163Q86VB7 1156 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 TRIML2Q8N7C3 387 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 WDSUB1Q8N9V3 476 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 OR56A1Q8NGH5 318 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 OR5M9Q8NGP3 310 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 GTF2H4Q92759 462 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 PHF12Q96QT6 1004 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 CCDC106Q9BWC9 280 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 SUCOQ9UBS9 1254 aaKnown RBP15.55■□□□□ 0.08
VPS52-215ENST00000464425 HRH3Q9Y5N1 445 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 HECTD1Q9ULT8 2610 aa15.55■□□□□ 0.08
VPS52-215ENST00000464425 PTPN13Q12923 2485 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 SPTAN1Q13813 2472 aaKnown RBP15.54■□□□□ 0.08
VPS52-215ENST00000464425 A0A1B0GVC2 190 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 C17orf51A8MQB3 221 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 RFXANKO14593 260 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 SNPHO15079 494 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 SCO2O43819 266 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 SUSD5O60279 629 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 DCTN3O75935 186 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 SOX30O94993 753 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 ZCCHC18P0CG32 403 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 CD1EP15812 388 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 CAPN3P20807 821 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 ELAVL4P26378 380 aaKnown RBP15.54■□□□□ 0.08
VPS52-215ENST00000464425 PTPN6P29350 595 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 EVI2BP34910 448 aa15.54■□□□□ 0.08
VPS52-215ENST00000464425 PSMD4P55036 377 aaKnown RBP15.54■□□□□ 0.08
VPS52-215ENST00000464425 GXYLT1Q4G148 440 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms