RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 NEURL3Q96EH8 262 aa14.07□□□□□ -0.16
RAB11FIP3-208ENST00000464263 PHF12Q96QT6 1004 aa14.07□□□□□ -0.16
RAB11FIP3-208ENST00000464263 SLC35A5Q9BS91 424 aa14.07□□□□□ -0.16
RAB11FIP3-208ENST00000464263 TMEM120AQ9BXJ8 343 aa14.07□□□□□ -0.16
RAB11FIP3-208ENST00000464263 RTN4RQ9BZR6 473 aa14.07□□□□□ -0.16
RAB11FIP3-208ENST00000464263 UBQLN3Q9H347 655 aa14.07□□□□□ -0.16
RAB11FIP3-208ENST00000464263 ACKR4Q9NPB9 350 aa14.07□□□□□ -0.16
RAB11FIP3-208ENST00000464263 SLC6A13Q9NSD5 602 aa14.07□□□□□ -0.16
RAB11FIP3-208ENST00000464263 CCDC167Q9P0B6 97 aa14.07□□□□□ -0.16
RAB11FIP3-208ENST00000464263 ABCG2Q9UNQ0 655 aa14.07□□□□□ -0.16
RAB11FIP3-208ENST00000464263 HRH3Q9Y5N1 445 aa14.07□□□□□ -0.16
RAB11FIP3-208ENST00000464263 A0A1B0GVC2 190 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 DUXAA6NLW8 204 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 B4DXG7 233 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 RFXANKO14593 260 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 CDC40O60508 579 aaKnown RBP eCLIP14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 GSNP06396 782 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 ZCCHC18P0CG32 403 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 NCF2P19878 526 aaPredicted RBP14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 ELAVL4P26378 380 aaKnown RBP14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 LCN1P31025 176 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 RFX3P48380 749 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 MASP1P48740 699 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 CASP9P55211 416 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 RBPJQ06330 500 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 RCAN2Q14206 197 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 SQLEQ14534 574 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 GRAMD1BQ3KR37 738 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 TIGD2Q4W5G0 525 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 APOOLQ6UXV4 268 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 TRILQ7L0X0 811 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 GALNT10Q86SR1 603 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 SPPL2CQ8IUH8 684 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 GTF2H4Q92759 462 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 CHMP6Q96FZ7 201 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 ITCHQ96J02 903 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 SLC35G5Q96KT7 338 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 G6PC3Q9BUM1 346 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 RMND5AQ9H871 391 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 TRIM33Q9UPN9 1127 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 C15orf41Q9Y2V0 281 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 PCDHGB3Q9Y5G1 929 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 WIF1Q9Y5W5 379 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 LIPGQ9Y5X9 500 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 HIVEP3Q5T1R4 2406 aa14.06□□□□□ -0.16
RAB11FIP3-208ENST00000464263 SUSD5O60279 629 aa14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 HCN1O60741 890 aa14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 SLC19A2O60779 497 aa14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 SEMA7AO75326 666 aa14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 CBR3O75828 277 aa14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 HPNP05981 417 aa14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 NGFRP08138 427 aa14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 TBXA2RP21731 343 aa14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 CHI3L1P36222 383 aaPredicted RBP14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 TRPC1P48995 793 aa14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 ARFIP2P53365 341 aa14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 AGKQ53H12 422 aa14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 DCST2Q5T1A1 773 aa14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 AP1ARQ63HQ0 302 aa14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 HEPHL1Q6MZM0 1159 aa14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 ARHGAP11AQ6P4F7 1023 aa14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 MARCH3Q86UD3 253 aa14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 PLCZ1Q86YW0 608 aa14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 TRIML2Q8N7C3 387 aa14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 CHDHQ8NE62 594 aaPredicted RBP14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 ZFP90Q8TF47 636 aa14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 SDF2Q99470 211 aa14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 OR51I1Q9H343 314 aa14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 RABEP2Q9H5N1 569 aa14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 B4GALT7Q9UBV7 327 aa14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 MYO7BQ6PIF6 2116 aa14.05□□□□□ -0.16
RAB11FIP3-208ENST00000464263 C17orf51A8MQB3 221 aa14.04□□□□□ -0.16
RAB11FIP3-208ENST00000464263 SCO2O43819 266 aa14.04□□□□□ -0.16
RAB11FIP3-208ENST00000464263 OXSR1O95747 527 aaPredicted RBP14.04□□□□□ -0.16
RAB11FIP3-208ENST00000464263 OR12D1P0DN82 309 aa14.04□□□□□ -0.16
RAB11FIP3-208ENST00000464263 GDF1P27539 372 aa14.04□□□□□ -0.16
RAB11FIP3-208ENST00000464263 PTGS2P35354 604 aa14.04□□□□□ -0.16
RAB11FIP3-208ENST00000464263 SF3A3Q12874 501 aaKnown RBP eCLIP14.04□□□□□ -0.161e-6■■■■□ 22.8
RAB11FIP3-208ENST00000464263 ARHGAP11BQ3KRB8 267 aa14.04□□□□□ -0.16
RAB11FIP3-208ENST00000464263 OR5M10Q6IEU7 315 aa14.04□□□□□ -0.16
RAB11FIP3-208ENST00000464263 SLC2A7Q6PXP3 512 aa14.04□□□□□ -0.16
RAB11FIP3-208ENST00000464263 DUSP19Q8WTR2 217 aa14.04□□□□□ -0.16
RAB11FIP3-208ENST00000464263 RELTQ969Z4 430 aa14.04□□□□□ -0.16
RAB11FIP3-208ENST00000464263 SPDL1Q96EA4 605 aa14.04□□□□□ -0.16
RAB11FIP3-208ENST00000464263 PAIP1Q9H074 479 aaKnown RBP14.04□□□□□ -0.16
RAB11FIP3-208ENST00000464263 SDHAF3Q9NRP4 125 aa14.04□□□□□ -0.16
RAB11FIP3-208ENST00000464263 UBQLN4Q9NRR5 601 aa14.04□□□□□ -0.16
RAB11FIP3-208ENST00000464263 TRGV5A0A0B4J1U4 118 aa14.03□□□□□ -0.16
RAB11FIP3-208ENST00000464263 ALG1L2C9J202 215 aa14.03□□□□□ -0.16
RAB11FIP3-208ENST00000464263 NPIPB9F8W1W9 429 aa14.03□□□□□ -0.16
RAB11FIP3-208ENST00000464263 AQP7O14520 342 aa14.03□□□□□ -0.16
RAB11FIP3-208ENST00000464263 LRRTM2O43300 516 aa14.03□□□□□ -0.16
RAB11FIP3-208ENST00000464263 TRAPPC6AO75865 159 aa14.03□□□□□ -0.16
RAB11FIP3-208ENST00000464263 AGR2O95994 175 aa14.03□□□□□ -0.16
RAB11FIP3-208ENST00000464263 HOXB9P17482 250 aaPredicted RBP14.03□□□□□ -0.16
RAB11FIP3-208ENST00000464263 CAPN3P20807 821 aa14.03□□□□□ -0.16
RAB11FIP3-208ENST00000464263 ENDOUP21128 410 aaKnown RBP14.03□□□□□ -0.16
RAB11FIP3-208ENST00000464263 CA7P43166 264 aa14.03□□□□□ -0.16
RAB11FIP3-208ENST00000464263 CLK3P49761 638 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms