RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 C17orf105B2RV13 164 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 TEX46H3BTG2 121 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 BCL2L11O43521 198 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 TRIM3O75382 744 aaPredicted RBP3.35□□□□□ -1.87
ITGB1-208ENST00000464001 UPK3AO75631 287 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 SEC24AO95486 1093 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 TGM6O95932 706 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 HPRP00739 348 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 EPOP01588 193 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 S100A6P06703 90 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 CLTAP09496 248 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 SLC2A2P11168 524 aaPredicted RBP3.35□□□□□ -1.87
ITGB1-208ENST00000464001 FCARP24071 287 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 SRD5A2P31213 254 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 HTR2BP41595 481 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 TSFMP43897 325 aaKnown RBP3.35□□□□□ -1.87
ITGB1-208ENST00000464001 NAPAP54920 295 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 PLTPP55058 493 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 KCNK10P57789 538 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 RPS15P62841 145 aaKnown RBP3.35□□□□□ -1.87
ITGB1-208ENST00000464001 BDH1Q02338 343 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 CSTF1Q05048 431 aaKnown RBP3.35□□□□□ -1.87
ITGB1-208ENST00000464001 NCBP1Q09161 790 aaKnown RBP3.35□□□□□ -1.87
ITGB1-208ENST00000464001 COTL1Q14019 142 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 MAPK6Q16659 721 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 TMEM44Q2T9K0 475 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 SLC25A53Q5H9E4 307 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 ELFN2Q5R3F8 820 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 LIPJQ5W064 366 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 ERICH5Q6P6B1 374 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 WASH2PQ6VEQ5 465 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 G2E3Q7L622 706 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 GPR141Q7Z602 305 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 LUZP2Q86TE4 346 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 SLC22A16Q86VW1 577 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 TPRA1Q86W33 373 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 ZNF683Q8IZ20 524 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 SLC38A6Q8IZM9 456 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 SYCE1Q8N0S2 351 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 TMEM123Q8N131 208 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 POM121L12Q8N7R1 296 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 NPEPL1Q8NDH3 523 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 OR4L1Q8NH43 312 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 KCNG3Q8TAE7 436 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 ZPLD1Q8TCW7 415 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 RAET1EQ8TD07 263 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 TSEN15Q8WW01 171 aaKnown RBP3.35□□□□□ -1.87
ITGB1-208ENST00000464001 OR1E3Q8WZA6 343 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 MCUR1Q96AQ8 359 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 ZNF486Q96H40 463 aaPredicted RBP3.35□□□□□ -1.87
ITGB1-208ENST00000464001 COQ2Q96H96 371 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 HPDLQ96IR7 371 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 DEFB118Q96PH6 123 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 NKX3-1Q99801 234 aaPredicted RBP3.35□□□□□ -1.87
ITGB1-208ENST00000464001 CCDC3Q9BQI4 270 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 TRIM62Q9BVG3 475 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 FUNDC2Q9BWH2 189 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 BLZF1Q9H2G9 400 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 RHBGQ9H310 441 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 FBXO44Q9H4M3 255 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 TDRD3Q9H7E2 651 aaKnown RBP3.35□□□□□ -1.87
ITGB1-208ENST00000464001 C8orf33Q9H7E9 229 aaPredicted RBP3.35□□□□□ -1.87
ITGB1-208ENST00000464001 TREM1Q9NP99 234 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 LZTFL1Q9NQ48 299 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 QPCTLQ9NXS2 382 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 MIS18AQ9NYP9 233 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 LHX3Q9UBR4 397 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 BCAP29Q9UHQ4 241 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 DAPK2Q9UIK4 370 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 KLF2Q9Y5W3 355 aaPredicted RBP3.35□□□□□ -1.87
ITGB1-208ENST00000464001 ABCA7Q8IZY2 2146 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 INSRP06213 1382 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 KANK1Q14678 1352 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 NINLQ9Y2I6 1382 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 CCDC162PA2VCL2 907 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 PCP4L1A6NKN8 68 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 E5RGE8 158 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 ZNF701M0R085 212 aaPredicted RBP3.34□□□□□ -1.87
ITGB1-208ENST00000464001 ZSCAN12O43309 604 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 SYT7O43581 403 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 NDUFB10O96000 172 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 IGKV3-15P01624 115 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 KRTAP1-4P0C5Y4 121 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 NEFHP12036 1026 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 PRKACAP17612 351 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 PTNP21246 168 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 CYLC1P35663 651 aaPredicted RBP3.34□□□□□ -1.87
ITGB1-208ENST00000464001 CSNK1EP49674 416 aaKnown RBP3.34□□□□□ -1.87
ITGB1-208ENST00000464001 BCAP31P51572 246 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 TPMTP51580 245 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 CSNK2BP67870 215 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 OTUD4Q01804 1114 aaKnown RBP3.34□□□□□ -1.87
ITGB1-208ENST00000464001 EXOSC2Q13868 293 aaKnown RBP3.34□□□□□ -1.87
ITGB1-208ENST00000464001 SPHARQ15513 63 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 CHRNA6Q15825 494 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 ODF4Q2M2E3 257 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 DCAF4L1Q3SXM0 396 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 HIGD2BQ4VC39 106 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 ZNF542PQ5EBM4 170 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 TTC27Q6P3X3 843 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms