RNA–Protein interactions for RNA: ENST00000463375.1

TMEM56-204, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 349 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-204ENST00000463375 TGFBR1P36897 503 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 EIF2DP41214 584 aaKnown RBP-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 RAB28P51157 221 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 GEMIN4P57678 1058 aaKnown RBP-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 LRP2P98164 4655 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 C17orf67Q0P5P2 114 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 SMC1AQ14683 1233 aaKnown RBP-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 KRTAP19-8Q3LI54 63 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 CFAP221Q4G0U5 840 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 SPOUT1Q5T280 376 aaKnown RBP-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 WDR74Q6RFH5 385 aaPredicted RBP-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 CLEC4GQ6UXB4 293 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 C19orf35Q6ZS72 473 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 Q6ZSA8 131 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 CREBRFQ8IUR6 639 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 FAM219AQ8IW50 185 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 ZNF740Q8NDX6 193 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 OR2A12Q8NGT7 310 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 FAM151AQ8WW52 585 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 RGP1Q92546 391 aaPredicted RBP-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 PSMG2Q969U7 264 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 DNAJC1Q96KC8 554 aaKnown RBP-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 ZNF558Q96NG5 402 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 CPXM1Q96SM3 734 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 RASL11BQ9BPW5 248 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 HDHD3Q9BSH5 251 aaPredicted RBP-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 TEKT3Q9BXF9 490 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 LHX5Q9H2C1 402 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 IFI27L2Q9H2X8 130 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 PDE7BQ9NP56 450 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 GDF3Q9NR23 364 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 EHFQ9NZC4 300 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 VPS18Q9P253 973 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 ADD3Q9UEY8 706 aaKnown RBP-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 FOXA2Q9Y261 457 aaPredicted RBP-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 L3MBTL1Q9Y468 752 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 S4R3C0 116 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 CACNA1DQ01668 2161 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 RIF1Q5UIP0 2472 aaKnown RBP-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 FASNP49327 2511 aaKnown RBP-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 CUL9Q8IWT3 2517 aa-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 UBR5O95071 2799 aaPredicted RBP-0.24□□□□□ -2.45
TMEM56-204ENST00000463375 SVILO95425 2214 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 ABCA2Q9BZC7 2435 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 MYO18BQ8IUG5 2567 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 LAMA3Q16787 3333 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 TRBV7-9A0A0J9YWB2 115 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 SH3PXD2BA1X283 911 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 WDR46O15213 610 aaKnown RBP-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 ZNF264O43296 627 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 PGLSO95336 258 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 ANP32DO95626 131 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 SNAI1O95863 264 aaPredicted RBP-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 MOSP00540 346 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 MBL2P11226 248 aaPredicted RBP-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 SDC1P18827 310 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 VDAC1P21796 283 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 SPRR2DP22532 72 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 PSMB4P28070 264 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 TRIM23P36406 574 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 TKTL1P51854 596 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 FLI1Q01543 452 aaPredicted RBP-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 GABPAQ06546 454 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 TNFRSF9Q07011 255 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 SLC3A1Q07837 685 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 MZT1Q08AG7 82 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 CHAF1BQ13112 559 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 GNMTQ14749 295 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 PSG5Q15238 335 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 SPHARQ15513 63 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 MEA1Q16626 185 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 TMEM95Q3KNT9 176 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 LIPKQ5VXJ0 399 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 TXNRD3NBQ6F5E7 133 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 STEAP1BQ6NZ63 245 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 ATRAIDQ6UW56 229 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 PRSS41Q7RTY9 318 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 PHLDB2Q86SQ0 1253 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 PCP2Q8IVA1 136 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 SMAP1Q8IYB5 467 aaPredicted RBP-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 Q8N976 141 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 GATSQ8NAP1 163 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 PRCCQ92733 491 aaPredicted RBP-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 KCNA7Q96RP8 456 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 AGPAT1Q99943 283 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 KATNB1Q9BVA0 655 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 LRRC2Q9BYS8 371 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 NGBQ9NPG2 151 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 PNO1Q9NRX1 252 aaKnown RBP-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 GPR173Q9NS66 373 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 ELOVL2Q9NXB9 296 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 SPRR3Q9UBC9 169 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 ZNF629Q9UEG4 869 aaPredicted RBP-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 MTRF1LQ9UGC7 380 aaKnown RBP-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 TUBGCP6Q96RT7 1819 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 CACNA1GO43497 2377 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 POLQO75417 2590 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 CHD8Q9HCK8 2581 aa-0.25□□□□□ -2.45
TMEM56-204ENST00000463375 FAT1Q14517 4588 aa-0.26□□□□□ -2.45
TMEM56-204ENST00000463375 LAMA2P24043 3122 aaKnown RBP-0.26□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms