RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 TRMT12Q53H54 448 aaKnown RBP6.85□□□□□ -1.31
SMC3-202ENST00000462899 RAET1LQ5VY80 246 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 CYB5R2Q6BCY4 276 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 SLC48A1Q6P1K1 146 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 CYP20A1Q6UW02 462 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 CHMP1BQ7LBR1 199 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 ZNF525Q8N782 197 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 STEAP2Q8NFT2 490 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 OR52R1Q8NGF1 315 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 PIWIL2Q8TC59 973 aaKnown RBP6.85□□□□□ -1.31
SMC3-202ENST00000462899 C10orf105Q8TEF2 133 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 MAGOHBQ96A72 148 aaKnown RBP6.85□□□□□ -1.31
SMC3-202ENST00000462899 C1GALT1C1Q96EU7 318 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 C1orf159Q96HA4 380 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 VSTM2LQ96N03 204 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 ZNF681Q96N22 645 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 ATOH8Q96SQ7 321 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 ADOQ96SZ5 270 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 CENPKQ9BS16 269 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 NTMT1Q9BV86 223 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 CAB39LQ9H9S4 337 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 PPANQ9NQ55 473 aaKnown RBP6.85□□□□□ -1.31
SMC3-202ENST00000462899 SMYD2Q9NRG4 433 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 CLEC4AQ9UMR7 237 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 CHMP2BQ9UQN3 213 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 AP4B1Q9Y6B7 739 aa6.85□□□□□ -1.31
SMC3-202ENST00000462899 KMT2CQ8NEZ4 4911 aaKnown RBP6.85□□□□□ -1.31
SMC3-202ENST00000462899 NOTCH1P46531 2555 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 IGLV3-32A0A0A0MS00 114 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 H3BML4 177 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 H7C417 338 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 FOXE1O00358 373 aaPredicted RBP6.84□□□□□ -1.31
SMC3-202ENST00000462899 FADS1O60427 444 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 UGDHO60701 494 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 RAMP1O60894 148 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 HK1P19367 917 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 MAPK1P28482 360 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 EVI2BP34910 448 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 ANP32AP39687 249 aaKnown RBP6.84□□□□□ -1.31
SMC3-202ENST00000462899 COMPP49747 757 aaPredicted RBP6.84□□□□□ -1.31
SMC3-202ENST00000462899 NEK2P51955 445 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 NUDT6P53370 316 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 CORO7P57737 925 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 ATP6V0D1P61421 351 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 MRPS35P82673 323 aaKnown RBP6.84□□□□□ -1.31
SMC3-202ENST00000462899 POU4F1Q01851 419 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 DLG1Q12959 904 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 EFR3AQ14156 821 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 P2RY6Q15077 328 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 TSC22D1Q15714 1073 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 LTB4RQ15722 352 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 FAM174BQ3ZCQ3 159 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 GLYR1Q49A26 553 aaPredicted RBP6.84□□□□□ -1.31
SMC3-202ENST00000462899 ZNF628Q5EBL2 1059 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 SFRP5Q5T4F7 317 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 LIPJQ5W064 366 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 MFSD12Q6NUT3 480 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 CLEC2AQ6UVW9 174 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 SHISA2Q6UWI4 295 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 TFAP2EQ6VUC0 442 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 ZNF662Q6ZS27 426 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 RFLNBQ8N5W9 214 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.84□□□□□ -1.31
SMC3-202ENST00000462899 L3MBTL4Q8NA19 623 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 ADCY4Q8NFM4 1077 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 OR4K17Q8NGC6 315 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 OR5M1Q8NGP8 315 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 ZNF675Q8TD23 568 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 PROX1Q92786 737 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 GFM2Q969S9 779 aaKnown RBP6.84□□□□□ -1.31
SMC3-202ENST00000462899 CNRIP1Q96F85 164 aaPredicted RBP6.84□□□□□ -1.31
SMC3-202ENST00000462899 CFAP36Q96G28 342 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 GPR22Q99680 433 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 TACO1Q9BSH4 297 aaKnown RBP6.84□□□□□ -1.31
SMC3-202ENST00000462899 CACNG6Q9BXT2 260 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 BRINP2Q9C0B6 783 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 DDX47Q9H0S4 455 aaKnown RBP6.84□□□□□ -1.31
SMC3-202ENST00000462899 STMN4Q9H169 189 aaPredicted RBP6.84□□□□□ -1.31
SMC3-202ENST00000462899 DSN1Q9H410 356 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 MANSC1Q9H8J5 431 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 GLRX2Q9NS18 164 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 CISD1Q9NZ45 108 aaKnown RBP6.84□□□□□ -1.31
SMC3-202ENST00000462899 NUDT4Q9NZJ9 180 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 CD274Q9NZQ7 290 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 PRODH2Q9UF12 536 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 BCAP29Q9UHQ4 241 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 ADAM29Q9UKF5 820 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 MTO1Q9Y2Z2 717 aaKnown RBP6.84□□□□□ -1.31
SMC3-202ENST00000462899 PCDHA9Q9Y5H5 950 aa6.84□□□□□ -1.31
SMC3-202ENST00000462899 UBFD1O14562 309 aaKnown RBP6.83□□□□□ -1.32
SMC3-202ENST00000462899 ADAMDEC1O15204 470 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 PHGDHO43175 533 aaKnown RBP6.83□□□□□ -1.32
SMC3-202ENST00000462899 NME6O75414 186 aaPredicted RBP6.83□□□□□ -1.32
SMC3-202ENST00000462899 REM1O75628 298 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 ZNF17P17021 662 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 ITGA2P17301 1181 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 PSMA4P25789 261 aaKnown RBP6.83□□□□□ -1.32
SMC3-202ENST00000462899 FNTAP49354 379 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 C21orf58P58505 322 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 RPS3AP61247 264 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms