RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 SERTM1A2A2V5 107 aa13.88□□□□□ -0.19
SKA3-204ENST00000462482 TTC36A6NLP5 189 aa13.88□□□□□ -0.19
SKA3-204ENST00000462482 FADS1O60427 444 aa13.88□□□□□ -0.19
SKA3-204ENST00000462482 KCNH1O95259 989 aa13.88□□□□□ -0.19
SKA3-204ENST00000462482 IL33O95760 270 aa13.88□□□□□ -0.19
SKA3-204ENST00000462482 PLGP00747 810 aaPredicted RBP13.88□□□□□ -0.19
SKA3-204ENST00000462482 CD8BP10966 210 aa13.88□□□□□ -0.19
SKA3-204ENST00000462482 CRYGSP22914 178 aa13.88□□□□□ -0.19
SKA3-204ENST00000462482 UGT2B10P36537 528 aa13.88□□□□□ -0.19
SKA3-204ENST00000462482 C17orf67Q0P5P2 114 aa13.88□□□□□ -0.19
SKA3-204ENST00000462482 PON3Q15166 354 aa13.88□□□□□ -0.19
SKA3-204ENST00000462482 ACKR1Q16570 336 aa13.88□□□□□ -0.19
SKA3-204ENST00000462482 GLYR1Q49A26 553 aaPredicted RBP13.88□□□□□ -0.19
SKA3-204ENST00000462482 VPS26BQ4G0F5 336 aa13.88□□□□□ -0.19
SKA3-204ENST00000462482 TRMT10CQ7L0Y3 403 aaKnown RBP13.88□□□□□ -0.19
SKA3-204ENST00000462482 NOA1Q8NC60 698 aaKnown RBP13.88□□□□□ -0.19
SKA3-204ENST00000462482 FAM76AQ8TAV0 307 aa13.88□□□□□ -0.19
SKA3-204ENST00000462482 DUSP19Q8WTR2 217 aa13.88□□□□□ -0.19
SKA3-204ENST00000462482 FIG4Q92562 907 aa13.88□□□□□ -0.19
SKA3-204ENST00000462482 CCL19Q99731 98 aa13.88□□□□□ -0.19
SKA3-204ENST00000462482 BDH2Q9BUT1 245 aa13.88□□□□□ -0.19
SKA3-204ENST00000462482 MYNNQ9NPC7 610 aa13.88□□□□□ -0.19
SKA3-204ENST00000462482 RRAGDQ9NQL2 400 aaPredicted RBP13.88□□□□□ -0.19
SKA3-204ENST00000462482 TAS2R7Q9NYW3 318 aa13.88□□□□□ -0.19
SKA3-204ENST00000462482 DCDC2Q9UHG0 476 aa13.88□□□□□ -0.19
SKA3-204ENST00000462482 EMC9Q9Y3B6 208 aa13.88□□□□□ -0.19
SKA3-204ENST00000462482 AP4B1Q9Y6B7 739 aa13.88□□□□□ -0.19
SKA3-204ENST00000462482 NCKAP5O14513 1909 aa13.88□□□□□ -0.19
SKA3-204ENST00000462482 AKAP6Q13023 2319 aa13.87□□□□□ -0.19
SKA3-204ENST00000462482 A0A1W2PPR1 153 aa13.87□□□□□ -0.19
SKA3-204ENST00000462482 OR2M5A3KFT3 312 aa13.87□□□□□ -0.19
SKA3-204ENST00000462482 MYL2P10916 166 aa13.87□□□□□ -0.19
SKA3-204ENST00000462482 GPC1P35052 558 aa13.87□□□□□ -0.19
SKA3-204ENST00000462482 KIR2DL2P43627 348 aaPredicted RBP13.87□□□□□ -0.19
SKA3-204ENST00000462482 CLDN15P56746 228 aa13.87□□□□□ -0.19
SKA3-204ENST00000462482 OCRLQ01968 901 aa13.87□□□□□ -0.19
SKA3-204ENST00000462482 CFAP157Q5JU67 520 aa13.87□□□□□ -0.19
SKA3-204ENST00000462482 FAM219BQ5XKK7 198 aa13.87□□□□□ -0.19
SKA3-204ENST00000462482 FAM71E1Q6IPT2 247 aa13.87□□□□□ -0.19
SKA3-204ENST00000462482 ZNF474Q6S9Z5 364 aaPredicted RBP13.87□□□□□ -0.19
SKA3-204ENST00000462482 C20orf204Q6ZNR8 217 aa13.87□□□□□ -0.19
SKA3-204ENST00000462482 IKBIPQ70UQ0 350 aa13.87□□□□□ -0.19
SKA3-204ENST00000462482 FAM214BQ7L5A3 538 aa13.87□□□□□ -0.19
SKA3-204ENST00000462482 MARCH3Q86UD3 253 aa13.87□□□□□ -0.19
SKA3-204ENST00000462482 CXorf67Q86X51 503 aaPredicted RBP13.87□□□□□ -0.19
SKA3-204ENST00000462482 OR2L13Q8N349 312 aa13.87□□□□□ -0.19
SKA3-204ENST00000462482 FNDC9Q8TBE3 224 aa13.87□□□□□ -0.19
SKA3-204ENST00000462482 C1GALT1C1Q96EU7 318 aa13.87□□□□□ -0.19
SKA3-204ENST00000462482 ZC3HAV1LQ96H79 300 aaKnown RBP13.87□□□□□ -0.19
SKA3-204ENST00000462482 KCNA7Q96RP8 456 aa13.87□□□□□ -0.19
SKA3-204ENST00000462482 SMR3AQ99954 134 aa13.87□□□□□ -0.19
SKA3-204ENST00000462482 KLHL4Q9C0H6 718 aa13.87□□□□□ -0.19
SKA3-204ENST00000462482 RNF122Q9H9V4 155 aa13.87□□□□□ -0.19
SKA3-204ENST00000462482 PSMC3IPQ9P2W1 217 aaPredicted RBP13.87□□□□□ -0.19
SKA3-204ENST00000462482 ARHGAP21Q5T5U3 1957 aa13.86□□□□□ -0.19
SKA3-204ENST00000462482 DEFB108AA8MXU0 73 aa13.86□□□□□ -0.19
SKA3-204ENST00000462482 GOLGA8RI6L899 631 aa13.86□□□□□ -0.19
SKA3-204ENST00000462482 UPK1AO00322 258 aa13.86□□□□□ -0.19
SKA3-204ENST00000462482 UTS2O95399 124 aa13.86□□□□□ -0.19
SKA3-204ENST00000462482 HEXAP06865 529 aa13.86□□□□□ -0.19
SKA3-204ENST00000462482 TBXA2RP21731 343 aa13.86□□□□□ -0.19
SKA3-204ENST00000462482 GABRA3P34903 492 aa13.86□□□□□ -0.19
SKA3-204ENST00000462482 CTBP2P56545 445 aa13.86□□□□□ -0.19
SKA3-204ENST00000462482 IFT20Q8IY31 132 aa13.86□□□□□ -0.19
SKA3-204ENST00000462482 ZNF610Q8N9Z0 462 aa13.86□□□□□ -0.19
SKA3-204ENST00000462482 OR5M1Q8NGP8 315 aa13.86□□□□□ -0.19
SKA3-204ENST00000462482 CAVIN3Q969G5 261 aa13.86□□□□□ -0.19
SKA3-204ENST00000462482 ELP4Q96EB1 424 aa13.86□□□□□ -0.19
SKA3-204ENST00000462482 AMDHD1Q96NU7 426 aa13.86□□□□□ -0.19
SKA3-204ENST00000462482 GLIPR2Q9H4G4 154 aa13.86□□□□□ -0.19
SKA3-204ENST00000462482 PAQR5Q9NXK6 330 aaPredicted RBP13.86□□□□□ -0.19
SKA3-204ENST00000462482 POLR3HQ9Y535 204 aaPredicted RBP13.86□□□□□ -0.19
SKA3-204ENST00000462482 C17orf51A8MQB3 221 aa13.85□□□□□ -0.19
SKA3-204ENST00000462482 H0YC42 278 aa13.85□□□□□ -0.19
SKA3-204ENST00000462482 EIF1AYO14602 144 aaKnown RBP13.85□□□□□ -0.19
SKA3-204ENST00000462482 RSL1D1O76021 490 aaKnown RBP13.85□□□□□ -0.19
SKA3-204ENST00000462482 SYNGR4O95473 234 aa13.85□□□□□ -0.19
SKA3-204ENST00000462482 ANGPTL1O95841 491 aa13.85□□□□□ -0.19
SKA3-204ENST00000462482 PYGBP11216 843 aa13.85□□□□□ -0.19
SKA3-204ENST00000462482 PRPS2P11908 318 aa13.85□□□□□ -0.19
SKA3-204ENST00000462482 PPP3CBP16298 524 aa13.85□□□□□ -0.19
SKA3-204ENST00000462482 ECHS1P30084 290 aa13.85□□□□□ -0.19
SKA3-204ENST00000462482 EIF1AXP47813 144 aaKnown RBP13.85□□□□□ -0.19
SKA3-204ENST00000462482 SUCLG1P53597 346 aaKnown RBP13.85□□□□□ -0.19
SKA3-204ENST00000462482 TPD52P55327 224 aaPredicted RBP13.85□□□□□ -0.19
SKA3-204ENST00000462482 CLDN20P56880 219 aa13.85□□□□□ -0.19
SKA3-204ENST00000462482 EXOC3L2Q2M3D2 409 aa13.85□□□□□ -0.19
SKA3-204ENST00000462482 NOXRED1Q6NXP6 359 aa13.85□□□□□ -0.19
SKA3-204ENST00000462482 PRSS57Q6UWY2 283 aa13.85□□□□□ -0.19
SKA3-204ENST00000462482 ZNF550Q7Z398 422 aa13.85□□□□□ -0.19
SKA3-204ENST00000462482 YTHDF3Q7Z739 585 aaKnown RBP13.85□□□□□ -0.19
SKA3-204ENST00000462482 WDR75Q8IWA0 830 aaKnown RBP13.85□□□□□ -0.19
SKA3-204ENST00000462482 METTL25Q8N6Q8 603 aa13.85□□□□□ -0.19
SKA3-204ENST00000462482 CEP70Q8NHQ1 597 aa13.85□□□□□ -0.19
SKA3-204ENST00000462482 ZFP28Q8NHY6 868 aa13.85□□□□□ -0.19
SKA3-204ENST00000462482 GPR151Q8TDV0 419 aa13.85□□□□□ -0.19
SKA3-204ENST00000462482 C11orf24Q96F05 449 aaPredicted RBP13.85□□□□□ -0.19
SKA3-204ENST00000462482 Q96MF0 132 aa13.85□□□□□ -0.19
SKA3-204ENST00000462482 LMF2Q9BU23 707 aaKnown RBP13.85□□□□□ -0.19
SKA3-204ENST00000462482 GSTO2Q9H4Y5 243 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 348.4 ms