RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 IL2RAP01589 272 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 TUBBP07437 444 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 ACP2P11117 423 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 DPP4P27487 766 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 CEACAM8P31997 349 aaPredicted RBP9.23□□□□□ -0.93
SF3A3-204ENST00000462258 GABRA3P34903 492 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 TIMP3P35625 211 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 CLK3P49761 638 aaKnown RBP9.23□□□□□ -0.93
SF3A3-204ENST00000462258 LHX2P50458 406 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 ASCL1P50553 236 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 ZNF136P52737 540 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 PRKAG1P54619 331 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 DSCR4P56555 118 aaPredicted RBP9.23□□□□□ -0.93
SF3A3-204ENST00000462258 PRR5P85299 388 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 MYBPHQ13203 477 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 GANABQ14697 944 aaKnown RBP9.23□□□□□ -0.93
SF3A3-204ENST00000462258 MLC1Q15049 377 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 C6orf136Q5SQH8 315 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 RAET1LQ5VY80 246 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 CES4AQ5XG92 561 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 MFSD12Q6NUT3 480 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 EXOC3L1Q86VI1 746 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 TRIM42Q8IWZ5 723 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 ZNF781Q8N8C0 355 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 FADS6Q8N9I5 356 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 OR2M3Q8NG83 312 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 OR7A2PQ8NGA2 310 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 CEP70Q8NHQ1 597 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 ZPLD1Q8TCW7 415 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 GPR151Q8TDV0 419 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 SLC9A6Q92581 669 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 JADE3Q92613 823 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 HOXB13Q92826 284 aaPredicted RBP9.23□□□□□ -0.93
SF3A3-204ENST00000462258 FAM120BQ96EK7 910 aaKnown RBP9.23□□□□□ -0.93
SF3A3-204ENST00000462258 TUBA1CQ9BQE3 449 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 TBL1XR1Q9BZK7 514 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 SLC24A3Q9HC58 644 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 MCCC2Q9HCC0 563 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 SDHAF3Q9NRP4 125 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 SIRT3Q9NTG7 399 aaPredicted RBP9.23□□□□□ -0.93
SF3A3-204ENST00000462258 ZCCHC3Q9NUD5 404 aaKnown RBP9.23□□□□□ -0.93
SF3A3-204ENST00000462258 NTMQ9P121 344 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 KCNN3Q9UGI6 736 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 RPH3AQ9Y2J0 694 aaPredicted RBP9.23□□□□□ -0.93
SF3A3-204ENST00000462258 ACTL7BQ9Y614 415 aa9.23□□□□□ -0.93
SF3A3-204ENST00000462258 CLCA1A8K7I4 914 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 BIRC5O15392 142 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 EMC8O43402 210 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 ITM2AO43736 263 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 ZWINTO95229 277 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 UTS2O95399 124 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 IGKV1D-16P01601 117 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 MYZAPP0CAP1 466 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 DHRS4L1P0CG22 281 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 LAMP1P11279 417 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 CPN1P15169 458 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 ZNF708P17019 499 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 POU3F2P20265 443 aaPredicted RBP9.22□□□□□ -0.93
SF3A3-204ENST00000462258 MAP3K8P41279 467 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 PRIM2P49643 509 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 DGKQP52824 942 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 CLDN18P56856 261 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 KRTAP10-9P60411 292 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 ABCE1P61221 599 aaKnown RBP9.22□□□□□ -0.93
SF3A3-204ENST00000462258 SRYQ05066 204 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 MAD2L1Q13257 205 aaPredicted RBP9.22□□□□□ -0.93
SF3A3-204ENST00000462258 LASP1Q14847 261 aaKnown RBP9.22□□□□□ -0.93
SF3A3-204ENST00000462258 DUSP5Q16690 384 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 GRAMD1BQ3KR37 738 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 TNFAIP8L3Q5GJ75 292 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 CPTPQ5TA50 214 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 IL23RQ5VWK5 629 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 GALNT10Q86SR1 603 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 CROCCP2Q86T23 111 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 MARCH3Q86UD3 253 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 KRTCAP2Q8N6L1 136 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 COX18Q8N8Q8 333 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 C9orf106Q8NAJ2 232 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 ZBTB9Q96C00 473 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 LRRC46Q96FV0 321 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 OTUB1Q96FW1 271 aaPredicted RBP9.22□□□□□ -0.93
SF3A3-204ENST00000462258 SH3GL2Q99962 352 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 ZNF559Q9BR84 538 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 RTN4RQ9BZR6 473 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 DSN1Q9H410 356 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 PTGES2Q9H7Z7 377 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 CALHM2Q9HA72 323 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 NEUROD4Q9HD90 331 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 ATAD3AQ9NVI7 634 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 CLCF1Q9UBD9 225 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 ZNF629Q9UEG4 869 aaPredicted RBP9.22□□□□□ -0.93
SF3A3-204ENST00000462258 EIF3LQ9Y262 564 aaKnown RBP9.22□□□□□ -0.93
SF3A3-204ENST00000462258 MRPS18CQ9Y3D5 142 aaKnown RBP9.22□□□□□ -0.93
SF3A3-204ENST00000462258 L3MBTL1Q9Y468 752 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 SNX8Q9Y5X2 465 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 MED12LQ86YW9 2145 aa9.22□□□□□ -0.93
SF3A3-204ENST00000462258 PCNX3Q9H6A9 2034 aa9.21□□□□□ -0.93
SF3A3-204ENST00000462258 A0A1W2PRB8 838 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 EEF1E1-BLOC1S5C9J1V9 151 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 EEF1E1O43324 174 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms