RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 SCN2BO60939 215 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 CBR3O75828 277 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 KCNK2O95069 426 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 IGKV1D-16P01601 117 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 IL6P05231 212 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 HPNP05981 417 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 PGRP06401 933 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 HPGDP15428 266 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 ATP6V1C1P21283 382 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 MATN1P21941 496 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 UQCRC2P22695 453 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 PTPN6P29350 595 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 IL12AP29459 219 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 GCKP35557 465 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 CHI3L1P36222 383 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 IDH3AP50213 366 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 DGKQP52824 942 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 PHC1P78364 1004 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 LRRC74AQ0VAA2 488 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 STX5Q13190 355 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 GRAMD1BQ3KR37 738 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 FNDC7Q5VTL7 733 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 ZNF585AQ6P3V2 769 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 GALNT10Q86SR1 603 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 CLEC4FQ8N1N0 589 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 TRIML2Q8N7C3 387 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 OR5M9Q8NGP3 310 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 NEIL3Q8TAT5 605 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 OR7D2Q96RA2 312 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 OR52E6Q96RD3 313 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 G6PC3Q9BUM1 346 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 TBL1XR1Q9BZK7 514 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 UBQLN3Q9H347 655 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 TP63Q9H3D4 680 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 MED4Q9NPJ6 270 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 SERHLQ9NQF3 203 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 GPATCH2Q9NW75 528 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 FLRT3Q9NZU0 649 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 BTNL2Q9UIR0 455 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 DKKL1Q9UK85 242 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 MEMO1Q9Y316 297 aa9.66□□□□□ -0.86
TRAPPC12-213ENST00000461577 WIPF3A6NGB9 483 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 DUXAA6NLW8 204 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 E9PLN8 166 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 SCDO00767 359 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 ATP8B1O43520 1251 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 FADS1O60427 444 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 ZG16O60844 167 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 RNF224P0DH78 156 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 LCN1P31025 176 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 SMSP52788 366 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 GAS1P54826 345 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 GXYLT1Q4G148 440 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 EIPR1Q53HC9 387 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 WIPI1Q5MNZ9 446 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 EXOSC6Q5RKV6 272 aaKnown RBP9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 CCNJQ5T5M9 372 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 TMEM211Q6ICI0 200 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 OR5M10Q6IEU7 315 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 RPTNQ6XPR3 784 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 C3P1Q6ZMU1 363 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 YRDCQ86U90 279 aaKnown RBP9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 MARCH3Q86UD3 253 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 WDSUB1Q8N9V3 476 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 FAM83FQ8NEG4 500 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 OR5D16Q8NGK9 328 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 OR14L1PQ8NHC6 308 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 FAM110BQ8TC76 370 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 RNF138Q8WVD3 245 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 THOC1Q96FV9 657 aaKnown RBP9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 CCDC120Q96HB5 630 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 CCDC115Q96NT0 180 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 PHF12Q96QT6 1004 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 PANX1Q96RD7 426 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 VKORC1Q9BQB6 163 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 EBF4Q9BQW3 602 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 SLC35A5Q9BS91 424 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 DSN1Q9H410 356 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 RMND5AQ9H871 391 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 HHATLQ9HCP6 504 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 SDR39U1Q9NRG7 319 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 PNPLA3Q9NST1 481 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 ALKBH4Q9NXW9 302 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 SPRR3Q9UBC9 169 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 TNFRSF10DQ9UBN6 386 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 SLC6A5Q9Y345 797 aa9.65□□□□□ -0.86
TRAPPC12-213ENST00000461577 DIDO1Q9BTC0 2240 aaKnown RBP9.64□□□□□ -0.87
TRAPPC12-213ENST00000461577 A1L4Q6 167 aa9.64□□□□□ -0.87
TRAPPC12-213ENST00000461577 FAM234BA2RU67 622 aa9.64□□□□□ -0.87
TRAPPC12-213ENST00000461577 CCDC154A6NI56 674 aa9.64□□□□□ -0.87
TRAPPC12-213ENST00000461577 FIGNL2A6NMB9 653 aa9.64□□□□□ -0.87
TRAPPC12-213ENST00000461577 NDUFB5O43674 189 aa9.64□□□□□ -0.87
TRAPPC12-213ENST00000461577 EDF1O60869 148 aaKnown RBP9.64□□□□□ -0.87
TRAPPC12-213ENST00000461577 ANP32DO95626 131 aa9.64□□□□□ -0.87
TRAPPC12-213ENST00000461577 OXSR1O95747 527 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC12-213ENST00000461577 ANGPTL1O95841 491 aa9.64□□□□□ -0.87
TRAPPC12-213ENST00000461577 AGR2O95994 175 aa9.64□□□□□ -0.87
TRAPPC12-213ENST00000461577 AK1P00568 194 aa9.64□□□□□ -0.87
TRAPPC12-213ENST00000461577 ENDOUP21128 410 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms