RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 PFDN4Q9NQP4 134 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 CNIH4Q9P003 139 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 FREM3P0C091 2139 aa12.46□□□□□ -0.42
SCAMP4-206ENST00000460767 OR6C70A6NIJ9 312 aa12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 FAM166BA8MTA8 275 aa12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 PDPK1O15530 556 aa12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 AKAP10O43572 662 aa12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 TSPAN2O60636 221 aa12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 PPM1BO75688 479 aa12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 NTSP30990 170 aa12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 PTGDSP41222 190 aa12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 CORO7P57737 925 aa12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 FBXW4P57775 412 aa12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 SORDQ00796 357 aa12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 MAD2L1Q13257 205 aaPredicted RBP12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 WLSQ5T9L3 541 aa12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 C6orf163Q5TEZ5 329 aa12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 SLC22A10Q63ZE4 541 aa12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 ATG16L1Q676U5 607 aa12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 TMEM107Q6UX40 140 aa12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 R3HCC1LQ7Z5L2 792 aaKnown RBP12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 WDR75Q8IWA0 830 aaKnown RBP12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 TRIM42Q8IWZ5 723 aa12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 TMEM251Q8N6I4 163 aa12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 OR7A2PQ8NGA2 310 aa12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 OR8J2Q8NGG1 315 aa12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 CDC26Q8NHZ8 85 aa12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 ZBED6CLQ96FA7 236 aaPredicted RBP12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 PAIP2Q9BPZ3 127 aaKnown RBP12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 ANGPTL4Q9BY76 406 aa12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 UBQLN3Q9H347 655 aa12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 SACM1LQ9NTJ5 587 aa12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 NOP53Q9NZM5 478 aaKnown RBP12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 BCAP29Q9UHQ4 241 aa12.45□□□□□ -0.42
SCAMP4-206ENST00000460767 ERN1O75460 977 aaKnown RBP12.44□□□□□ -0.42
SCAMP4-206ENST00000460767 LY6G6DO95868 133 aa12.44□□□□□ -0.42
SCAMP4-206ENST00000460767 EPXP11678 715 aa12.44□□□□□ -0.42
SCAMP4-206ENST00000460767 CD53P19397 219 aa12.44□□□□□ -0.42
SCAMP4-206ENST00000460767 UQCRC1P31930 480 aa12.44□□□□□ -0.42
SCAMP4-206ENST00000460767 RPL3P39023 403 aaKnown RBP12.44□□□□□ -0.42
SCAMP4-206ENST00000460767 MAN2A2P49641 1150 aa12.44□□□□□ -0.42
SCAMP4-206ENST00000460767 TMED10P49755 219 aaKnown RBP12.44□□□□□ -0.42
SCAMP4-206ENST00000460767 CDK9P50750 372 aaKnown RBP12.44□□□□□ -0.42
SCAMP4-206ENST00000460767 PHC1P78364 1004 aa12.44□□□□□ -0.42
SCAMP4-206ENST00000460767 DESI1Q6ICB0 168 aa12.44□□□□□ -0.42
SCAMP4-206ENST00000460767 LRRC75A-AS1Q8N1F1 130 aa12.44□□□□□ -0.42
SCAMP4-206ENST00000460767 NATD1Q8N6N6 113 aa12.44□□□□□ -0.42
SCAMP4-206ENST00000460767 PIWIL2Q8TC59 973 aaKnown RBP12.44□□□□□ -0.42
SCAMP4-206ENST00000460767 TESCQ96BS2 214 aa12.44□□□□□ -0.42
SCAMP4-206ENST00000460767 OMA1Q96E52 524 aa12.44□□□□□ -0.42
SCAMP4-206ENST00000460767 BHLHE41Q9C0J9 482 aaPredicted RBP12.44□□□□□ -0.42
SCAMP4-206ENST00000460767 ZNF703Q9H7S9 590 aaPredicted RBP12.44□□□□□ -0.42
SCAMP4-206ENST00000460767 TUBA8Q9NY65 449 aaPredicted RBP12.44□□□□□ -0.42
SCAMP4-206ENST00000460767 TAS2R9Q9NYW1 312 aa12.44□□□□□ -0.42
SCAMP4-206ENST00000460767 SH3BP4Q9P0V3 963 aa12.44□□□□□ -0.42
SCAMP4-206ENST00000460767 EIF3LQ9Y262 564 aaKnown RBP12.44□□□□□ -0.42
SCAMP4-206ENST00000460767 GPR45Q9Y5Y3 372 aa12.44□□□□□ -0.42
SCAMP4-206ENST00000460767 CSPG4Q6UVK1 2322 aa12.44□□□□□ -0.42
SCAMP4-206ENST00000460767 CAPN14A8MX76 684 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 B4DXG7 233 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 SLCO1B7G3V0H7 640 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 DVL2O14641 736 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 COQ9O75208 318 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 UGT2B11O75310 529 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 NKX2-2O95096 273 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 LBPP18428 481 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 ENDOUP21128 410 aaKnown RBP12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 HPCAL1P37235 193 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 PIGAP37287 484 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 CASP3P42574 277 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 MAGEA5P43359 124 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 DNASE1L1P49184 302 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 GAS1P54826 345 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 NRG3P56975 720 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 NKX6-1P78426 367 aaPredicted RBP12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 SNTB1Q13884 538 aaKnown RBP12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 NNATQ16517 81 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 TBCELQ5QJ74 424 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 HLA-DQA1Q5Y7H0 255 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 BICRALQ6AI39 1079 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 SEM1Q6ZVN7 128 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 NUP54Q7Z3B4 507 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 CXorf67Q86X51 503 aaPredicted RBP12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 OR4N2Q8NGD1 307 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 ACTRT2Q8TDY3 377 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 FAM120BQ96EK7 910 aaKnown RBP12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 TEX37Q96LM6 180 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 PIP5K1AQ99755 562 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 AIG1Q9NVV5 245 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 ZNF629Q9UEG4 869 aaPredicted RBP12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 MAPRE3Q9UPY8 281 aa12.43□□□□□ -0.42
SCAMP4-206ENST00000460767 TTC36A6NLP5 189 aa12.42□□□□□ -0.42
SCAMP4-206ENST00000460767 G3V3Y1 287 aa12.42□□□□□ -0.42
SCAMP4-206ENST00000460767 TP53I11O14683 189 aa12.42□□□□□ -0.42
SCAMP4-206ENST00000460767 ARHGEF9O43307 516 aa12.42□□□□□ -0.42
SCAMP4-206ENST00000460767 ABCB7O75027 752 aa12.42□□□□□ -0.42
SCAMP4-206ENST00000460767 P04436 131 aa12.42□□□□□ -0.42
SCAMP4-206ENST00000460767 RFPL3SP0C7P2 107 aa12.42□□□□□ -0.42
SCAMP4-206ENST00000460767 EPHA3P29320 983 aa12.42□□□□□ -0.42
SCAMP4-206ENST00000460767 CEACAM8P31997 349 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms