RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 TMEM38AQ9H6F2 299 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 SCPEP1Q9HB40 452 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 WASH6PQ9NQA3 447 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 PIAS3Q9Y6X2 628 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 SPACA6W5XKT8 324 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 DNAH14Q0VDD8 3507 aa14.47□□□□□ -0.09
LMNB1-203ENST00000460265 NPIPA5A0A0B4J1W7 369 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 NPIPA7E9PJI5 369 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 NPIPA8P0DM63 369 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 FAHD1Q6P587 224 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 PODNL1Q6PEZ8 512 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 SLC46A3Q7Z3Q1 461 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 ZFP41Q8N8Y5 198 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 RIT1Q92963 219 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 ZG16BQ96DA0 208 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 TBX5Q99593 518 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 MVB12BQ9H7P6 319 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 HRASLS2Q9NWW9 162 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 PRSS38A1L453 326 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 PRAMEF25A6NGN4 478 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 HNRNPCL2B2RXH8 293 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 WWP2O00308 870 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 NUPL2O15504 423 aaKnown RBP14.46□□□□□ -0.09
LMNB1-203ENST00000460265 OR10H2O60403 315 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 CLEC3AO75596 197 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 SLC22A5O76082 557 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 NR2F6P10588 404 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 TFF2Q03403 129 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 SLC35F1Q5T1Q4 408 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 LIPKQ5VXJ0 399 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 OR1E3Q8WZA6 343 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 C11orf24Q96F05 449 aaPredicted RBP14.46□□□□□ -0.09
LMNB1-203ENST00000460265 LRR1Q96L50 414 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 RSPH9Q9H1X1 276 aaPredicted RBP14.46□□□□□ -0.09
LMNB1-203ENST00000460265 SMURF1Q9HCE7 757 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 KCNE3Q9Y6H6 103 aa14.46□□□□□ -0.09
LMNB1-203ENST00000460265 FAM170BA6NMN3 283 aa14.46□□□□□ -0.1
LMNB1-203ENST00000460265 B4DXG7 233 aa14.46□□□□□ -0.1
LMNB1-203ENST00000460265 EGFP01133 1207 aa14.46□□□□□ -0.1
LMNB1-203ENST00000460265 C1QBP02746 253 aa14.46□□□□□ -0.1
LMNB1-203ENST00000460265 XCR1P46094 333 aa14.46□□□□□ -0.1
LMNB1-203ENST00000460265 REEP5Q00765 189 aa14.46□□□□□ -0.1
LMNB1-203ENST00000460265 HYAL2Q12891 473 aa14.46□□□□□ -0.1
LMNB1-203ENST00000460265 SEC23BQ15437 767 aa14.46□□□□□ -0.1
LMNB1-203ENST00000460265 COMMD7Q86VX2 200 aa14.46□□□□□ -0.1
LMNB1-203ENST00000460265 GHDCQ8N2G8 530 aa14.46□□□□□ -0.1
LMNB1-203ENST00000460265 ZBTB44Q8NCP5 570 aa14.46□□□□□ -0.1
LMNB1-203ENST00000460265 DNAJA4Q8WW22 397 aaPredicted RBP14.46□□□□□ -0.1
LMNB1-203ENST00000460265 RLN3Q8WXF3 142 aa14.46□□□□□ -0.1
LMNB1-203ENST00000460265 RAB11FIP5Q9BXF6 653 aa14.46□□□□□ -0.1
LMNB1-203ENST00000460265 NXF2Q9GZY0 626 aaKnown RBP14.46□□□□□ -0.1
LMNB1-203ENST00000460265 C11orf54Q9H0W9 315 aaPredicted RBP14.46□□□□□ -0.1
LMNB1-203ENST00000460265 NIPAL2Q9H841 368 aa14.46□□□□□ -0.1
LMNB1-203ENST00000460265 CLCA3PQ9Y6N3 262 aa14.46□□□□□ -0.1
LMNB1-203ENST00000460265 PLXNA4Q9HCM2 1894 aa14.46□□□□□ -0.1
LMNB1-203ENST00000460265 TCRBV21S2A2A0A5A6 115 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 TOR1AO14656 332 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 ATP5A1P25705 553 aaKnown RBP14.45□□□□□ -0.1
LMNB1-203ENST00000460265 PSMA1P25786 263 aaKnown RBP14.45□□□□□ -0.1
LMNB1-203ENST00000460265 PXNP49023 591 aaPredicted RBP14.45□□□□□ -0.1
LMNB1-203ENST00000460265 ADPRHP54922 357 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 GNA13Q14344 377 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 NNATQ16517 81 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 TATDN3Q17R31 274 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 GAB4Q2WGN9 574 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 B3GLCTQ6Y288 498 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 LRRC56Q8IYG6 542 aaPredicted RBP14.45□□□□□ -0.1
LMNB1-203ENST00000460265 OR2L5Q8NG80 312 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 RPLP0P6Q8NHW5 317 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 KLHL6Q8WZ60 621 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 COX14Q96I36 57 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 FCRL1Q96LA6 429 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 WFDC6Q9BQY6 131 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 TSSK6Q9BXA6 273 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 PSORS1C1Q9UIG5 152 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 SPIN1Q9Y657 262 aaPredicted RBP14.45□□□□□ -0.1
LMNB1-203ENST00000460265 GMFGO60234 142 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 CDK1P06493 297 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 NOS3P29474 1203 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 CSTF2P33240 577 aaKnown RBP eCLIP14.45□□□□□ -0.1
LMNB1-203ENST00000460265 GPR4P46093 362 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 TMEM65Q6PI78 240 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 FIGNL1Q6PIW4 674 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 LHFPL3Q86UP9 236 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 TCTE3Q8IZS6 198 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 ZNF354BQ96LW1 612 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 CLEC2DQ9UHP7 191 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 ICKQ9UPZ9 632 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 NTNG1Q9Y2I2 539 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 UNC13CQ8NB66 2214 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 EML2O95834 649 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 DRD2P14416 443 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 RAB25P57735 213 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 SRP54P61011 504 aaKnown RBP14.45□□□□□ -0.1
LMNB1-203ENST00000460265 DLX2Q07687 328 aaPredicted RBP14.45□□□□□ -0.1
LMNB1-203ENST00000460265 MAB21L1Q13394 359 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 NCF4Q15080 339 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 FLYWCH1Q4VC44 716 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 PYDC2Q56P42 97 aa14.45□□□□□ -0.1
LMNB1-203ENST00000460265 CAMKMTQ7Z624 323 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms