RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 ZNF613Q6PF04 617 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 GDF7Q7Z4P5 450 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 CDH24Q86UP0 819 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 TPRA1Q86W33 373 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 KIF18BQ86Y91 864 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 LAX1Q8IWV1 398 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 CACTIN-AS1Q8N1I8 211 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 CLIP4Q8N3C7 705 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 FBXL6Q8N531 539 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 ACBD7Q8N6N7 88 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 TMEM145Q8NBT3 493 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 OR9A2Q8NGT5 310 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 OR14C36Q8NHC7 312 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 ADAMTS18Q8TE60 1221 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 RERGQ96A58 199 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-202ENST00000459727 WDR92Q96MX6 357 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 FRMD6Q96NE9 622 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 PHOX2BQ99453 314 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 CD180Q99467 661 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 GABRG3Q99928 467 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 ZNF350Q9GZX5 532 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 TWSG1Q9GZX9 223 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 SRMSQ9H3Y6 488 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 KLHL31Q9H511 634 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 XKR8Q9H6D3 395 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 NEK6Q9HC98 313 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 TRIM36Q9NQ86 728 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 ERVK13-1Q9NX77 482 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 TBC1D24Q9ULP9 559 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 CBLCQ9ULV8 474 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 SLC6A14Q9UN76 642 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 C19orf53Q9UNZ5 99 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-202ENST00000459727 ZFR2Q9UPR6 939 aaKnown RBP8.27□□□□□ -1.09
HDAC3-202ENST00000459727 SF3B6Q9Y3B4 125 aaKnown RBP8.27□□□□□ -1.09
HDAC3-202ENST00000459727 COL4A3Q01955 1670 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 LRRK1Q38SD2 2015 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 A0A0G2JN53 185 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 A0A1W2PQ09 198 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 ANKRD61A6NGH8 418 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 UNC119BA6NIH7 251 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 GLOD5A6NK44 160 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 CPSF4LA6NMK7 179 aaKnown RBP8.26□□□□□ -1.09
HDAC3-202ENST00000459727 OR5K4A6NMS3 321 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 CENPBD1B2RD01 187 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 SGK494L7N484 410 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 PLOD3O60568 738 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 IFNGP01579 166 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 MSL3P1P0C860 447 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 LIMS3P0CW19 117 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 LIMS4P0CW20 117 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 CPMP14384 443 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 NID1P14543 1247 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 HLA-DMAP28067 261 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 HOXD12P35452 270 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 RBM34P42696 430 aaKnown RBP8.26□□□□□ -1.09
HDAC3-202ENST00000459727 AVPR1BP47901 424 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 ADPRHP54922 357 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 PSMD4P55036 377 aaKnown RBP8.26□□□□□ -1.09
HDAC3-202ENST00000459727 MRPS15P82914 257 aaKnown RBP8.26□□□□□ -1.09
HDAC3-202ENST00000459727 SHC2P98077 582 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 ADAM15Q13444 863 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 TCEA2Q15560 299 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 ZNF79Q15937 498 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 PYDC2Q56P42 97 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 SLC35F1Q5T1Q4 408 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 C18orf63Q68DL7 685 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 BICRALQ6AI39 1079 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 TANGO2Q6ICL3 276 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 FAM180BQ6P0A1 224 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 TMEM53Q6P2H8 277 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 ZNF322Q6U7Q0 402 aaPredicted RBP8.26□□□□□ -1.09
HDAC3-202ENST00000459727 PLET1Q6UQ28 207 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 BAIAP2L2Q6UXY1 529 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 FRRS1Q6ZNA5 592 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 CXXC5Q7LFL8 322 aaKnown RBP8.26□□□□□ -1.09
HDAC3-202ENST00000459727 VRK2Q86Y07 508 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 RDH10Q8IZV5 341 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 AMER3Q8N944 861 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 AVL9Q8NBF6 648 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 ZNF485Q8NCK3 441 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 SIMC1Q8NDZ2 872 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 OR6F1Q8NGZ6 308 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 GRPEL2Q8TAA5 225 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 NEIL3Q8TAT5 605 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 FANK1Q8TC84 345 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 HAVCR2Q8TDQ0 301 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 DNAJA4Q8WW22 397 aaPredicted RBP8.26□□□□□ -1.09
HDAC3-202ENST00000459727 TRIM63Q969Q1 353 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 TM4SF19Q96DZ7 209 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 GIMAP5Q96F15 307 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 FAM46AQ96IP4 442 aaKnown RBP8.26□□□□□ -1.09
HDAC3-202ENST00000459727 C10orf90Q96M02 699 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 ZNF559Q9BR84 538 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 KATNB1Q9BVA0 655 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 TRMT61BQ9BVS5 477 aaKnown RBP8.26□□□□□ -1.09
HDAC3-202ENST00000459727 AICDAQ9GZX7 198 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.26□□□□□ -1.09
HDAC3-202ENST00000459727 EGLN3Q9H6Z9 239 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 ABCB9Q9NP78 766 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms