RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 MR1Q95460 341 aa22.62■■□□□ 1.21
U2AF1-204ENST00000459639 DHRS1Q96LJ7 313 aa22.62■■□□□ 1.21
U2AF1-204ENST00000459639 DEPDC7Q96QD5 511 aa22.62■■□□□ 1.21
U2AF1-204ENST00000459639 BARD1Q99728 777 aaKnown RBP22.62■■□□□ 1.21
U2AF1-204ENST00000459639 CRB3Q9BUF7 120 aa22.62■■□□□ 1.21
U2AF1-204ENST00000459639 DDA1Q9BW61 102 aa22.62■■□□□ 1.21
U2AF1-204ENST00000459639 ACER3Q9NUN7 267 aa22.62■■□□□ 1.21
U2AF1-204ENST00000459639 PDP1Q9P0J1 537 aaPredicted RBP22.62■■□□□ 1.21
U2AF1-204ENST00000459639 PCDHGA10Q9Y5H3 936 aa22.62■■□□□ 1.21
U2AF1-204ENST00000459639 FRG2CA6NGY1 282 aa22.61■■□□□ 1.21
U2AF1-204ENST00000459639 FFAR1O14842 300 aa22.61■■□□□ 1.21
U2AF1-204ENST00000459639 GADD45GO95257 159 aa22.61■■□□□ 1.21
U2AF1-204ENST00000459639 IGKV1D-16P01601 117 aa22.61■■□□□ 1.21
U2AF1-204ENST00000459639 RPSAP08865 295 aaKnown RBP22.61■■□□□ 1.21
U2AF1-204ENST00000459639 NID1P14543 1247 aa22.61■■□□□ 1.21
U2AF1-204ENST00000459639 PRKACGP22612 351 aa22.61■■□□□ 1.21
U2AF1-204ENST00000459639 LIMS1P48059 325 aa22.61■■□□□ 1.21
U2AF1-204ENST00000459639 MERTKQ12866 999 aa22.61■■□□□ 1.21
U2AF1-204ENST00000459639 EPS8Q12929 822 aa22.61■■□□□ 1.21
U2AF1-204ENST00000459639 EIF3IQ13347 325 aaKnown RBP22.61■■□□□ 1.21
U2AF1-204ENST00000459639 GANABQ14697 944 aaKnown RBP22.61■■□□□ 1.21
U2AF1-204ENST00000459639 MAPK14Q16539 360 aa22.61■■□□□ 1.21
U2AF1-204ENST00000459639 COLEC12Q5KU26 742 aa22.61■■□□□ 1.21
U2AF1-204ENST00000459639 RNF220Q5VTB9 566 aa22.61■■□□□ 1.21
U2AF1-204ENST00000459639 ZAR1Q86SH2 424 aa22.61■■□□□ 1.21
U2AF1-204ENST00000459639 ZSCAN1Q8NBB4 408 aa22.61■■□□□ 1.21
U2AF1-204ENST00000459639 TAAR9Q96RI9 348 aa22.61■■□□□ 1.21
U2AF1-204ENST00000459639 AKIRIN1Q9H9L7 192 aaPredicted RBP22.61■■□□□ 1.21
U2AF1-204ENST00000459639 CENPVL1A0A0U1RR11 272 aa22.6■■□□□ 1.21
U2AF1-204ENST00000459639 SAGE2PA6NJ88 616 aa22.6■■□□□ 1.21
U2AF1-204ENST00000459639 HS6ST1O60243 411 aa22.6■■□□□ 1.21
U2AF1-204ENST00000459639 SEMA7AO75326 666 aa22.6■■□□□ 1.21
U2AF1-204ENST00000459639 UGT2B17O75795 530 aa22.6■■□□□ 1.21
U2AF1-204ENST00000459639 DRD5P21918 477 aa22.6■■□□□ 1.21
U2AF1-204ENST00000459639 LAPTM4AQ15012 233 aa22.6■■□□□ 1.21
U2AF1-204ENST00000459639 EBPQ15125 230 aaKnown RBP22.6■■□□□ 1.21
U2AF1-204ENST00000459639 NNATQ16517 81 aa22.6■■□□□ 1.21
U2AF1-204ENST00000459639 CPEB4Q17RY0 729 aaKnown RBP eCLIP22.6■■□□□ 1.21
U2AF1-204ENST00000459639 RFX4Q33E94 735 aa22.6■■□□□ 1.21
U2AF1-204ENST00000459639 CHERPQ8IWX8 916 aaKnown RBP22.6■■□□□ 1.21
U2AF1-204ENST00000459639 CLIP4Q8N3C7 705 aa22.6■■□□□ 1.21
U2AF1-204ENST00000459639 BCORP1Q8N888 145 aa22.6■■□□□ 1.21
U2AF1-204ENST00000459639 NR4A3Q92570 626 aa22.6■■□□□ 1.21
U2AF1-204ENST00000459639 ADIPOR1Q96A54 375 aa22.6■■□□□ 1.21
U2AF1-204ENST00000459639 PRRC1Q96M27 445 aa22.6■■□□□ 1.21
U2AF1-204ENST00000459639 C19orf25Q9UFG5 118 aaPredicted RBP22.6■■□□□ 1.21
U2AF1-204ENST00000459639 KCNE5Q9UJ90 142 aa22.6■■□□□ 1.21
U2AF1-204ENST00000459639 CCDC187A0A096LP49 1063 aa22.59■■□□□ 1.21
U2AF1-204ENST00000459639 NPIPA5A0A0B4J1W7 369 aa22.59■■□□□ 1.21
U2AF1-204ENST00000459639 NPIPA7E9PJI5 369 aa22.59■■□□□ 1.21
U2AF1-204ENST00000459639 PEX12O00623 359 aa22.59■■□□□ 1.21
U2AF1-204ENST00000459639 SNAP29O95721 258 aa22.59■■□□□ 1.21
U2AF1-204ENST00000459639 JMJD7P0C870 316 aa22.59■■□□□ 1.21
U2AF1-204ENST00000459639 NPIPA8P0DM63 369 aa22.59■■□□□ 1.21
U2AF1-204ENST00000459639 GPR143P51810 404 aa22.59■■□□□ 1.21
U2AF1-204ENST00000459639 PSMD4P55036 377 aaKnown RBP22.59■■□□□ 1.21
U2AF1-204ENST00000459639 CLDN6P56747 220 aa22.59■■□□□ 1.21
U2AF1-204ENST00000459639 SMIM11AP58511 58 aa22.59■■□□□ 1.21
U2AF1-204ENST00000459639 NPTX1Q15818 432 aa22.59■■□□□ 1.21
U2AF1-204ENST00000459639 EXOC3L2Q2M3D2 409 aa22.59■■□□□ 1.21
U2AF1-204ENST00000459639 TMEM205Q6UW68 189 aa22.59■■□□□ 1.21
U2AF1-204ENST00000459639 DHRS13Q6UX07 377 aa22.59■■□□□ 1.21
U2AF1-204ENST00000459639 C9orf40Q8IXQ3 194 aa22.59■■□□□ 1.21
U2AF1-204ENST00000459639 DHRSXQ8N5I4 330 aa22.59■■□□□ 1.21
U2AF1-204ENST00000459639 GIPC3Q8TF64 312 aa22.59■■□□□ 1.21
U2AF1-204ENST00000459639 PHF10Q8WUB8 498 aaKnown RBP22.59■■□□□ 1.21
U2AF1-204ENST00000459639 LCORQ96JN0 433 aaPredicted RBP22.59■■□□□ 1.21
U2AF1-204ENST00000459639 NR1H4Q96RI1 486 aaPredicted RBP22.59■■□□□ 1.21
U2AF1-204ENST00000459639 PSD2Q9BQI7 771 aa22.59■■□□□ 1.21
U2AF1-204ENST00000459639 ANKRD60Q9BZ19 345 aa22.59■■□□□ 1.21
U2AF1-204ENST00000459639 ARMC7Q9H6L4 198 aa22.59■■□□□ 1.21
U2AF1-204ENST00000459639 EVA1AQ9H8M9 152 aa22.59■■□□□ 1.21
U2AF1-204ENST00000459639 PISDQ9UG56 409 aa22.59■■□□□ 1.21
U2AF1-204ENST00000459639 TMEFF2Q9UIK5 374 aaPredicted RBP22.59■■□□□ 1.21
U2AF1-204ENST00000459639 A4GNTQ9UNA3 340 aa22.59■■□□□ 1.21
U2AF1-204ENST00000459639 PPIEQ9UNP9 301 aaKnown RBP22.59■■□□□ 1.21
U2AF1-204ENST00000459639 ORC6Q9Y5N6 252 aa22.59■■□□□ 1.21
U2AF1-204ENST00000459639 C2orf92A0A1B0GVN3 265 aa22.58■■□□□ 1.21
U2AF1-204ENST00000459639 RFX3P48380 749 aa22.58■■□□□ 1.21
U2AF1-204ENST00000459639 RAD23AP54725 363 aa22.58■■□□□ 1.21
U2AF1-204ENST00000459639 RGS8P57771 180 aaPredicted RBP22.58■■□□□ 1.21
U2AF1-204ENST00000459639 SLC36A3Q495N2 470 aa22.58■■□□□ 1.21
U2AF1-204ENST00000459639 FAHD1Q6P587 224 aa22.58■■□□□ 1.21
U2AF1-204ENST00000459639 SLC29A4Q7RTT9 530 aa22.58■■□□□ 1.21
U2AF1-204ENST00000459639 GALNT6Q8NCL4 622 aa22.58■■□□□ 1.21
U2AF1-204ENST00000459639 PIK3C3Q8NEB9 887 aa22.58■■□□□ 1.21
U2AF1-204ENST00000459639 OR52J3Q8NH60 311 aa22.58■■□□□ 1.21
U2AF1-204ENST00000459639 NXF5Q9H1B4 397 aaKnown RBP22.58■■□□□ 1.21
U2AF1-204ENST00000459639 NMNAT1Q9HAN9 279 aaPredicted RBP22.58■■□□□ 1.21
U2AF1-204ENST00000459639 H1F0P07305 194 aaKnown RBP22.58■■□□□ 1.2
U2AF1-204ENST00000459639 IGFBP5P24593 272 aa22.58■■□□□ 1.2
U2AF1-204ENST00000459639 CAPGP40121 348 aa22.58■■□□□ 1.2
U2AF1-204ENST00000459639 NCF4Q15080 339 aa22.58■■□□□ 1.2
U2AF1-204ENST00000459639 PDK3Q15120 406 aa22.58■■□□□ 1.2
U2AF1-204ENST00000459639 DECR1Q16698 335 aa22.58■■□□□ 1.2
U2AF1-204ENST00000459639 MICAQ29983 383 aa22.58■■□□□ 1.2
U2AF1-204ENST00000459639 HES3Q5TGS1 186 aa22.58■■□□□ 1.2
U2AF1-204ENST00000459639 HLA-DQA1Q5Y7H0 255 aa22.58■■□□□ 1.2
U2AF1-204ENST00000459639 ANKRD34AQ69YU3 496 aa22.58■■□□□ 1.2
U2AF1-204ENST00000459639 KDM4DQ6B0I6 523 aa22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms