RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 GIMAP5Q96F15 307 aa17.03■□□□□ 0.32
USP39-209ENST00000458268 UBQLN3Q9H347 655 aa17.03■□□□□ 0.32
USP39-209ENST00000458268 DSN1Q9H410 356 aa17.03■□□□□ 0.32
USP39-209ENST00000458268 ASIC5Q9NY37 505 aa17.03■□□□□ 0.32
USP39-209ENST00000458268 FAF1Q9UNN5 650 aaPredicted RBP17.03■□□□□ 0.32
USP39-209ENST00000458268 CACNA1CQ13936 2221 aa17.02■□□□□ 0.32
USP39-209ENST00000458268 ARHGAP21Q5T5U3 1957 aa17.02■□□□□ 0.32
USP39-209ENST00000458268 CBR3O75828 277 aa17.02■□□□□ 0.32
USP39-209ENST00000458268 NKX2-2O95096 273 aa17.02■□□□□ 0.32
USP39-209ENST00000458268 CLDN14O95500 239 aa17.02■□□□□ 0.32
USP39-209ENST00000458268 DCTP40126 519 aa17.02■□□□□ 0.32
USP39-209ENST00000458268 WNT3P56703 355 aa17.02■□□□□ 0.32
USP39-209ENST00000458268 POU6F2P78424 691 aaPredicted RBP17.02■□□□□ 0.32
USP39-209ENST00000458268 OCRLQ01968 901 aa17.02■□□□□ 0.32
USP39-209ENST00000458268 SRYQ05066 204 aa17.02■□□□□ 0.32
USP39-209ENST00000458268 GRAMD1BQ3KR37 738 aa17.02■□□□□ 0.32
USP39-209ENST00000458268 TMEM81Q6P7N7 255 aa17.02■□□□□ 0.32
USP39-209ENST00000458268 OR56A1Q8NGH5 318 aa17.02■□□□□ 0.32
USP39-209ENST00000458268 LRRC8CQ8TDW0 803 aa17.02■□□□□ 0.32
USP39-209ENST00000458268 ADAMTS15Q8TE58 950 aa17.02■□□□□ 0.32
USP39-209ENST00000458268 COQ8BQ96D53 544 aa17.02■□□□□ 0.32
USP39-209ENST00000458268 GIN1Q9NXP7 522 aa17.02■□□□□ 0.32
USP39-209ENST00000458268 MED11Q9P086 117 aa17.02■□□□□ 0.32
USP39-209ENST00000458268 PCDHGB4Q9UN71 923 aa17.02■□□□□ 0.32
USP39-209ENST00000458268 RNF6Q9Y252 685 aa17.02■□□□□ 0.32
USP39-209ENST00000458268 TTC36A6NLP5 189 aa17.01■□□□□ 0.31
USP39-209ENST00000458268 DIAPH2O60879 1101 aa17.01■□□□□ 0.31
USP39-209ENST00000458268 WDR1O75083 606 aa17.01■□□□□ 0.31
USP39-209ENST00000458268 IFI6P09912 130 aa17.01■□□□□ 0.31
USP39-209ENST00000458268 ALDOCP09972 364 aaKnown RBP17.01■□□□□ 0.31
USP39-209ENST00000458268 KIR3DL1P43629 444 aa17.01■□□□□ 0.31
USP39-209ENST00000458268 CASP9P55211 416 aa17.01■□□□□ 0.31
USP39-209ENST00000458268 RPS26P62854 115 aaKnown RBP17.01■□□□□ 0.31
USP39-209ENST00000458268 HBA1P69905 142 aa17.01■□□□□ 0.31
USP39-209ENST00000458268 ART3Q13508 389 aa17.01■□□□□ 0.31
USP39-209ENST00000458268 MLC1Q15049 377 aa17.01■□□□□ 0.31
USP39-209ENST00000458268 SLC9B1Q4ZJI4 515 aa17.01■□□□□ 0.31
USP39-209ENST00000458268 DCST1Q5T197 706 aa17.01■□□□□ 0.31
USP39-209ENST00000458268 SP5Q6BEB4 398 aaPredicted RBP17.01■□□□□ 0.31
USP39-209ENST00000458268 IFNEQ86WN2 208 aa17.01■□□□□ 0.31
USP39-209ENST00000458268 NATD1Q8N6N6 113 aa17.01■□□□□ 0.31
USP39-209ENST00000458268 ABTB1Q969K4 478 aaPredicted RBP17.01■□□□□ 0.31
USP39-209ENST00000458268 SFXN2Q96NB2 322 aa17.01■□□□□ 0.31
USP39-209ENST00000458268 UGT2B28Q9BY64 529 aa17.01■□□□□ 0.31
USP39-209ENST00000458268 NEUROD4Q9HD90 331 aa17.01■□□□□ 0.31
USP39-209ENST00000458268 SDHAF3Q9NRP4 125 aa17.01■□□□□ 0.31
USP39-209ENST00000458268 FBXO34Q9NWN3 711 aa17.01■□□□□ 0.31
USP39-209ENST00000458268 TAS2R10Q9NYW0 307 aa17.01■□□□□ 0.31
USP39-209ENST00000458268 FAM215AQ9Y5M1 114 aa17.01■□□□□ 0.31
USP39-209ENST00000458268 NPIPA5A0A0B4J1W7 369 aa17■□□□□ 0.31
USP39-209ENST00000458268 RNF103-CHMP3A0A140T963 221 aa17■□□□□ 0.31
USP39-209ENST00000458268 NPIPA7E9PJI5 369 aa17■□□□□ 0.31
USP39-209ENST00000458268 KCNK2O95069 426 aa17■□□□□ 0.31
USP39-209ENST00000458268 NPIPA8P0DM63 369 aa17■□□□□ 0.31
USP39-209ENST00000458268 HPGDP15428 266 aa17■□□□□ 0.31
USP39-209ENST00000458268 H2AFXP16104 143 aaPredicted RBP17■□□□□ 0.31
USP39-209ENST00000458268 BMP7P18075 431 aa17■□□□□ 0.31
USP39-209ENST00000458268 DPP4P27487 766 aa17■□□□□ 0.31
USP39-209ENST00000458268 S100A3P33764 101 aa17■□□□□ 0.31
USP39-209ENST00000458268 CLNS1AP54105 237 aaKnown RBP17■□□□□ 0.31
USP39-209ENST00000458268 UFM1P61960 85 aa17■□□□□ 0.31
USP39-209ENST00000458268 CRYZQ08257 329 aaKnown RBP17■□□□□ 0.31
USP39-209ENST00000458268 FAM174BQ3ZCQ3 159 aa17■□□□□ 0.31
USP39-209ENST00000458268 SPANXN4Q5MJ08 99 aa17■□□□□ 0.31
USP39-209ENST00000458268 RTL6Q6ICC9 239 aa17■□□□□ 0.31
USP39-209ENST00000458268 ACAD11Q709F0 780 aa17■□□□□ 0.31
USP39-209ENST00000458268 ZAR1Q86SH2 424 aa17■□□□□ 0.31
USP39-209ENST00000458268 ULK2Q8IYT8 1036 aa17■□□□□ 0.31
USP39-209ENST00000458268 ZNF614Q8N883 585 aa17■□□□□ 0.31
USP39-209ENST00000458268 OR5D16Q8NGK9 328 aa17■□□□□ 0.31
USP39-209ENST00000458268 DUSP19Q8WTR2 217 aa17■□□□□ 0.31
USP39-209ENST00000458268 SLC35G5Q96KT7 338 aa17■□□□□ 0.31
USP39-209ENST00000458268 TRIB1Q96RU8 372 aa17■□□□□ 0.31
USP39-209ENST00000458268 TIMP4Q99727 224 aa17■□□□□ 0.31
USP39-209ENST00000458268 TTYH2Q9BSA4 534 aa17■□□□□ 0.31
USP39-209ENST00000458268 ACTRT3Q9BYD9 372 aa17■□□□□ 0.31
USP39-209ENST00000458268 RTN4RQ9BZR6 473 aa17■□□□□ 0.31
USP39-209ENST00000458268 AIG1Q9NVV5 245 aa17■□□□□ 0.31
USP39-209ENST00000458268 FAM120CQ9NX05 1096 aaKnown RBP17■□□□□ 0.31
USP39-209ENST00000458268 ABCG2Q9UNQ0 655 aa17■□□□□ 0.31
USP39-209ENST00000458268 PCNX3Q9H6A9 2034 aa16.99■□□□□ 0.31
USP39-209ENST00000458268 NKX2-6A6NCS4 301 aa16.99■□□□□ 0.31
USP39-209ENST00000458268 E9PBE3 544 aa16.99■□□□□ 0.31
USP39-209ENST00000458268 SLCO1B7G3V0H7 640 aa16.99■□□□□ 0.31
USP39-209ENST00000458268 FADS1O60427 444 aa16.99■□□□□ 0.31
USP39-209ENST00000458268 ANGPTL1O95841 491 aa16.99■□□□□ 0.31
USP39-209ENST00000458268 GLI4P10075 376 aa16.99■□□□□ 0.31
USP39-209ENST00000458268 GABRA1P14867 456 aa16.99■□□□□ 0.31
USP39-209ENST00000458268 HK1P19367 917 aa16.99■□□□□ 0.31
USP39-209ENST00000458268 ATP6V1C1P21283 382 aa16.99■□□□□ 0.31
USP39-209ENST00000458268 STARP49675 285 aa16.99■□□□□ 0.31
USP39-209ENST00000458268 DGKQP52824 942 aa16.99■□□□□ 0.31
USP39-209ENST00000458268 RAET1LQ5VY80 246 aa16.99■□□□□ 0.31
USP39-209ENST00000458268 SPATA19Q7Z5L4 167 aa16.99■□□□□ 0.31
USP39-209ENST00000458268 OR5M1Q8NGP8 315 aa16.99■□□□□ 0.31
USP39-209ENST00000458268 PIWIL2Q8TC59 973 aaKnown RBP16.99■□□□□ 0.31
USP39-209ENST00000458268 SFXN5Q8TD22 340 aa16.99■□□□□ 0.31
USP39-209ENST00000458268 DTNBP1Q96EV8 351 aa16.99■□□□□ 0.31
USP39-209ENST00000458268 SH3YL1Q96HL8 342 aaPredicted RBP16.99■□□□□ 0.31
USP39-209ENST00000458268 ZBTB18Q99592 522 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms