RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 NME6O75414 186 aaPredicted RBP19.4■□□□□ 0.7
CPNE1-220ENST00000458038 CGAP01215 116 aa19.4■□□□□ 0.7
CPNE1-220ENST00000458038 IFI6P09912 130 aa19.4■□□□□ 0.7
CPNE1-220ENST00000458038 TCEA1P23193 301 aaKnown RBP19.4■□□□□ 0.7
CPNE1-220ENST00000458038 KCNJ5P48544 419 aa19.4■□□□□ 0.7
CPNE1-220ENST00000458038 NAA20P61599 178 aa19.4■□□□□ 0.7
CPNE1-220ENST00000458038 C2orf80Q0P641 193 aa19.4■□□□□ 0.7
CPNE1-220ENST00000458038 GLE1Q53GS7 698 aaKnown RBP19.4■□□□□ 0.7
CPNE1-220ENST00000458038 FAM76AQ8TAV0 307 aa19.4■□□□□ 0.7
CPNE1-220ENST00000458038 FIG4Q92562 907 aa19.4■□□□□ 0.7
CPNE1-220ENST00000458038 GFM2Q969S9 779 aaKnown RBP19.4■□□□□ 0.7
CPNE1-220ENST00000458038 PIK3IP1Q96FE7 263 aa19.4■□□□□ 0.7
CPNE1-220ENST00000458038 COX4I2Q96KJ9 171 aa19.4■□□□□ 0.7
CPNE1-220ENST00000458038 PINK1Q9BXM7 581 aa19.4■□□□□ 0.7
CPNE1-220ENST00000458038 C3orf14Q9HBI5 128 aa19.4■□□□□ 0.7
CPNE1-220ENST00000458038 MIEF1Q9NQG6 463 aa19.4■□□□□ 0.7
CPNE1-220ENST00000458038 MED11Q9P086 117 aa19.4■□□□□ 0.7
CPNE1-220ENST00000458038 DMGDHQ9UI17 866 aaKnown RBP19.4■□□□□ 0.7
CPNE1-220ENST00000458038 OR2M5A3KFT3 312 aa19.39■□□□□ 0.69
CPNE1-220ENST00000458038 H3BQF6 201 aa19.39■□□□□ 0.69
CPNE1-220ENST00000458038 SIAH2O43255 324 aa19.39■□□□□ 0.69
CPNE1-220ENST00000458038 IL33O95760 270 aa19.39■□□□□ 0.69
CPNE1-220ENST00000458038 GSTA1P08263 222 aa19.39■□□□□ 0.69
CPNE1-220ENST00000458038 CTAGE8P0CG41 777 aa19.39■□□□□ 0.69
CPNE1-220ENST00000458038 NTSP30990 170 aa19.39■□□□□ 0.69
CPNE1-220ENST00000458038 NCBP2P52298 156 aaKnown RBP eCLIP19.39■□□□□ 0.699e-8■□□□□ 9.8
CPNE1-220ENST00000458038 CLDN15P56746 228 aa19.39■□□□□ 0.69
CPNE1-220ENST00000458038 C17orf67Q0P5P2 114 aa19.39■□□□□ 0.69
CPNE1-220ENST00000458038 SPDYAQ5MJ70 313 aa19.39■□□□□ 0.69
CPNE1-220ENST00000458038 SH2D4BQ5SQS7 431 aa19.39■□□□□ 0.69
CPNE1-220ENST00000458038 Q71RC1 249 aaPredicted RBP19.39■□□□□ 0.69
CPNE1-220ENST00000458038 CTAGE4Q8IX94 777 aa19.39■□□□□ 0.69
CPNE1-220ENST00000458038 OR2L13Q8N349 312 aa19.39■□□□□ 0.69
CPNE1-220ENST00000458038 ACMSDQ8TDX5 336 aa19.39■□□□□ 0.69
CPNE1-220ENST00000458038 DUSP19Q8WTR2 217 aa19.39■□□□□ 0.69
CPNE1-220ENST00000458038 C1GALT1C1Q96EU7 318 aa19.39■□□□□ 0.69
CPNE1-220ENST00000458038 CCL19Q99731 98 aa19.39■□□□□ 0.69
CPNE1-220ENST00000458038 OPN3Q9H1Y3 402 aaPredicted RBP19.39■□□□□ 0.69
CPNE1-220ENST00000458038 DDX18Q9NVP1 670 aaKnown RBP19.39■□□□□ 0.69
CPNE1-220ENST00000458038 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.39■□□□□ 0.692e-10■□□□□ 8.4
CPNE1-220ENST00000458038 PSMG1O95456 288 aa19.38■□□□□ 0.69
CPNE1-220ENST00000458038 JUNP05412 331 aaKnown RBP19.38■□□□□ 0.69
CPNE1-220ENST00000458038 ABHD2P08910 425 aa19.38■□□□□ 0.69
CPNE1-220ENST00000458038 PPP3CBP16298 524 aa19.38■□□□□ 0.69
CPNE1-220ENST00000458038 TBXA2RP21731 343 aa19.38■□□□□ 0.69
CPNE1-220ENST00000458038 HTR6P50406 440 aa19.38■□□□□ 0.69
CPNE1-220ENST00000458038 SUCLG1P53597 346 aaKnown RBP19.38■□□□□ 0.69
CPNE1-220ENST00000458038 BTKQ06187 659 aa19.38■□□□□ 0.69
CPNE1-220ENST00000458038 PON3Q15166 354 aa19.38■□□□□ 0.69
CPNE1-220ENST00000458038 GUSBP1Q15486 140 aa19.38■□□□□ 0.69
CPNE1-220ENST00000458038 FAM71E1Q6IPT2 247 aa19.38■□□□□ 0.69
CPNE1-220ENST00000458038 FAM214BQ7L5A3 538 aa19.38■□□□□ 0.69
CPNE1-220ENST00000458038 METTL25Q8N6Q8 603 aa19.38■□□□□ 0.69
CPNE1-220ENST00000458038 MNS1Q8NEH6 495 aa19.38■□□□□ 0.69
CPNE1-220ENST00000458038 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.38■□□□□ 0.698e-8■■■■■ 32.7
CPNE1-220ENST00000458038 FNDC9Q8TBE3 224 aa19.38■□□□□ 0.69
CPNE1-220ENST00000458038 CCDC126Q96EE4 140 aa19.38■□□□□ 0.69
CPNE1-220ENST00000458038 EBPLQ9BY08 206 aa19.38■□□□□ 0.69
CPNE1-220ENST00000458038 UBTD1Q9HAC8 227 aa19.38■□□□□ 0.69
CPNE1-220ENST00000458038 MYNNQ9NPC7 610 aa19.38■□□□□ 0.69
CPNE1-220ENST00000458038 FANCFQ9NPI8 374 aa19.38■□□□□ 0.69
CPNE1-220ENST00000458038 PROCRQ9UNN8 238 aa19.38■□□□□ 0.69
CPNE1-220ENST00000458038 TIMM22Q9Y584 194 aa19.38■□□□□ 0.69
CPNE1-220ENST00000458038 IGLV3-32A0A0A0MS00 114 aa19.37■□□□□ 0.69
CPNE1-220ENST00000458038 UPK1AO00322 258 aa19.37■□□□□ 0.69
CPNE1-220ENST00000458038 SEC14L5O43304 696 aa19.37■□□□□ 0.69
CPNE1-220ENST00000458038 URI1O94763 535 aaPredicted RBP19.37■□□□□ 0.69
CPNE1-220ENST00000458038 SIRPAP78324 504 aa19.37■□□□□ 0.69
CPNE1-220ENST00000458038 TMEM107Q6UX40 140 aa19.37■□□□□ 0.69
CPNE1-220ENST00000458038 IKBIPQ70UQ0 350 aa19.37■□□□□ 0.69
CPNE1-220ENST00000458038 C17orf53Q8N3J3 647 aaPredicted RBP19.37■□□□□ 0.69
CPNE1-220ENST00000458038 ZNF610Q8N9Z0 462 aa19.37■□□□□ 0.69
CPNE1-220ENST00000458038 ELP4Q96EB1 424 aa19.37■□□□□ 0.69
CPNE1-220ENST00000458038 METTL2AQ96IZ6 378 aaKnown RBP19.37■□□□□ 0.69
CPNE1-220ENST00000458038 MARK4Q96L34 752 aa19.37■□□□□ 0.69
CPNE1-220ENST00000458038 TBL1XR1Q9BZK7 514 aa19.37■□□□□ 0.69
CPNE1-220ENST00000458038 PAQR5Q9NXK6 330 aaPredicted RBP19.37■□□□□ 0.69
CPNE1-220ENST00000458038 RAI1Q7Z5J4 1906 aaPredicted RBP19.36■□□□□ 0.69
CPNE1-220ENST00000458038 H3BML4 177 aa19.36■□□□□ 0.69
CPNE1-220ENST00000458038 TMCC2O75069 709 aa19.36■□□□□ 0.69
CPNE1-220ENST00000458038 LY6G6DO95868 133 aa19.36■□□□□ 0.69
CPNE1-220ENST00000458038 ECHS1P30084 290 aa19.36■□□□□ 0.69
CPNE1-220ENST00000458038 CCKARP32238 428 aa19.36■□□□□ 0.69
CPNE1-220ENST00000458038 CLDN20P56880 219 aa19.36■□□□□ 0.69
CPNE1-220ENST00000458038 PRR5P85299 388 aa19.36■□□□□ 0.69
CPNE1-220ENST00000458038 STX5Q13190 355 aa19.36■□□□□ 0.69
CPNE1-220ENST00000458038 SGCBQ16585 318 aa19.36■□□□□ 0.69
CPNE1-220ENST00000458038 IMPG1Q17R60 797 aa19.36■□□□□ 0.69
CPNE1-220ENST00000458038 YTHDF3Q7Z739 585 aaKnown RBP19.36■□□□□ 0.69
CPNE1-220ENST00000458038 NUDT8Q8WV74 236 aa19.36■□□□□ 0.69
CPNE1-220ENST00000458038 Q96MF0 132 aa19.36■□□□□ 0.69
CPNE1-220ENST00000458038 AMDHD1Q96NU7 426 aa19.36■□□□□ 0.69
CPNE1-220ENST00000458038 LMF2Q9BU23 707 aaKnown RBP19.36■□□□□ 0.69
CPNE1-220ENST00000458038 IQCGQ9H095 443 aaKnown RBP19.36■□□□□ 0.69
CPNE1-220ENST00000458038 GLIPR2Q9H4G4 154 aa19.36■□□□□ 0.69
CPNE1-220ENST00000458038 PLSCR4Q9NRQ2 329 aa19.36■□□□□ 0.69
CPNE1-220ENST00000458038 EMC9Q9Y3B6 208 aa19.36■□□□□ 0.69
CPNE1-220ENST00000458038 C17orf51A8MQB3 221 aa19.35■□□□□ 0.69
CPNE1-220ENST00000458038 H0YC42 278 aa19.35■□□□□ 0.69
CPNE1-220ENST00000458038 H7C1Q1 480 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms