RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 SPIN4Q56A73 249 aa12.81□□□□□ -0.36
LYSMD3-202ENST00000453259 MROH9Q5TGP6 573 aa12.81□□□□□ -0.36
LYSMD3-202ENST00000453259 ANKRD34AQ69YU3 496 aa12.81□□□□□ -0.36
LYSMD3-202ENST00000453259 GTF2IRD2BQ6EKJ0 949 aa12.81□□□□□ -0.36
LYSMD3-202ENST00000453259 C22orf34Q6ZV56 151 aa12.81□□□□□ -0.36
LYSMD3-202ENST00000453259 SSX8Q7RTT4 187 aa12.81□□□□□ -0.36
LYSMD3-202ENST00000453259 GTF2IRD2Q86UP8 949 aa12.81□□□□□ -0.36
LYSMD3-202ENST00000453259 CCDC116Q8IYX3 515 aa12.81□□□□□ -0.36
LYSMD3-202ENST00000453259 FAM9CQ8IZT9 166 aa12.81□□□□□ -0.36
LYSMD3-202ENST00000453259 C1orf52Q8N6N3 182 aaKnown RBP12.81□□□□□ -0.36
LYSMD3-202ENST00000453259 EFHD2Q96C19 240 aaPredicted RBP12.81□□□□□ -0.36
LYSMD3-202ENST00000453259 NAPGQ99747 312 aaPredicted RBP12.81□□□□□ -0.36
LYSMD3-202ENST00000453259 TACO1Q9BSH4 297 aaKnown RBP12.81□□□□□ -0.36
LYSMD3-202ENST00000453259 C1QTNF3Q9BXJ4 246 aa12.81□□□□□ -0.36
LYSMD3-202ENST00000453259 PRRG4Q9BZD6 226 aa12.81□□□□□ -0.36
LYSMD3-202ENST00000453259 GRIP2Q9C0E4 1043 aa12.81□□□□□ -0.36
LYSMD3-202ENST00000453259 ACTR6Q9GZN1 396 aa12.81□□□□□ -0.36
LYSMD3-202ENST00000453259 DPH5Q9H2P9 285 aa12.81□□□□□ -0.36
LYSMD3-202ENST00000453259 ESRP2Q9H6T0 727 aaKnown RBP12.81□□□□□ -0.36
LYSMD3-202ENST00000453259 LAMP3Q9UQV4 416 aa12.81□□□□□ -0.36
LYSMD3-202ENST00000453259 RNF115Q9Y4L5 304 aa12.81□□□□□ -0.36
LYSMD3-202ENST00000453259 ROS1P08922 2347 aa12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 USF3Q68DE3 2245 aa12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 HEATR5AQ86XA9 2040 aa12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 HMX2A2RU54 273 aa12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 C7orf72A4D263 438 aa12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 RNF223E7ERA6 249 aa12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 SCO2O43819 266 aa12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 AQP8O94778 261 aa12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 PDYNP01213 254 aa12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 KRT6AP02538 564 aa12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 KRT6BP04259 564 aa12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 RPS17P08708 135 aaKnown RBP12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 PABPC4LP0CB38 370 aaKnown RBP12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 COL6A2P12110 1019 aa12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 KRT6CP48668 564 aa12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 ZNHIT3Q15649 155 aaPredicted RBP12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 CHRFAM7AQ494W8 412 aa12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 GALNT18Q6P9A2 607 aa12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 DNM1P46Q6ZS02 220 aa12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 GGNQ86UU5 652 aa12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 WDR75Q8IWA0 830 aaKnown RBP12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 PHC2Q8IXK0 858 aa12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 OR9A2Q8NGT5 310 aa12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 AKAP1Q92667 903 aaKnown RBP eCLIP12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 PHF21BQ96EK2 531 aa12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 RAB17Q9H0T7 212 aa12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 C3orf14Q9HBI5 128 aa12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 GP6Q9HCN6 339 aa12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 Q9N2J8 555 aa12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 SLC35C2Q9NQQ7 365 aa12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 UTP11Q9Y3A2 253 aaKnown RBP12.8□□□□□ -0.36
LYSMD3-202ENST00000453259 H0YC42 278 aa12.79□□□□□ -0.36
LYSMD3-202ENST00000453259 ADAMDEC1O15204 470 aa12.79□□□□□ -0.36
LYSMD3-202ENST00000453259 DLX3O60479 287 aa12.79□□□□□ -0.36
LYSMD3-202ENST00000453259 IL33O95760 270 aa12.79□□□□□ -0.36
LYSMD3-202ENST00000453259 TUBBP07437 444 aa12.79□□□□□ -0.36
LYSMD3-202ENST00000453259 THBS1P07996 1170 aa12.79□□□□□ -0.36
LYSMD3-202ENST00000453259 TCEA1P23193 301 aaKnown RBP12.79□□□□□ -0.36
LYSMD3-202ENST00000453259 TPD52P55327 224 aaPredicted RBP12.79□□□□□ -0.36
LYSMD3-202ENST00000453259 PRR5P85299 388 aa12.79□□□□□ -0.36
LYSMD3-202ENST00000453259 GUCY2DQ02846 1103 aa12.79□□□□□ -0.36
LYSMD3-202ENST00000453259 ZNF155Q12901 538 aaPredicted RBP12.79□□□□□ -0.36
LYSMD3-202ENST00000453259 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.79□□□□□ -0.36
LYSMD3-202ENST00000453259 SGO1Q5FBB7 561 aa12.79□□□□□ -0.36
LYSMD3-202ENST00000453259 ROBO4Q8WZ75 1007 aa12.79□□□□□ -0.36
LYSMD3-202ENST00000453259 KAT2AQ92830 837 aa12.79□□□□□ -0.36
LYSMD3-202ENST00000453259 TBL1XR1Q9BZK7 514 aa12.79□□□□□ -0.36
LYSMD3-202ENST00000453259 FARSBQ9NSD9 589 aaKnown RBP12.79□□□□□ -0.36
LYSMD3-202ENST00000453259 FAIMQ9NVQ4 179 aa12.79□□□□□ -0.36
LYSMD3-202ENST00000453259 MED11Q9P086 117 aa12.79□□□□□ -0.36
LYSMD3-202ENST00000453259 CDC42EP3Q9UKI2 254 aa12.79□□□□□ -0.36
LYSMD3-202ENST00000453259 GRID1Q9ULK0 1009 aa12.79□□□□□ -0.36
LYSMD3-202ENST00000453259 STK38LQ9Y2H1 464 aa12.79□□□□□ -0.36
LYSMD3-202ENST00000453259 GNG14A0A1W2PPG7 69 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 PCDH7O60245 1069 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 PSMG1O95456 288 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 SYNGR4O95473 234 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 IL3P08700 152 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 DANCRP0C864 163 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 FAM157CP0CG43 387 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 PHBP35232 272 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 THBS2P35442 1172 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 MAGEA12P43365 314 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 EIF1AXP47813 144 aaKnown RBP12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 PLTPP55058 493 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 GNG11P61952 73 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 RASA2Q15283 850 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 NRF1Q16656 503 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 PDSS1Q5T2R2 415 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 LETMD1Q6P1Q0 360 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 ESPNLQ6ZVH7 1005 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 CCDC25Q86WR0 208 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 WFDC8Q8IUA0 241 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 GTPBP8Q8N3Z3 284 aaPredicted RBP12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 OR7G2Q8NG99 324 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 OR4N2Q8NGD1 307 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 FBXO25Q8TCJ0 367 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 ZNF483Q8TF39 744 aaPredicted RBP12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 DUSP19Q8WTR2 217 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms