RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 SLC25A3Q00325 362 aa16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 FUT7Q11130 342 aa16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 PAGE3Q5JUK9 113 aa16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 TBCELQ5QJ74 424 aa16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 ANKRD26P1Q6NSI1 321 aa16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 C8orf82Q6P1X6 216 aaPredicted RBP16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 TMEM64Q6YI46 380 aa16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 ARPINQ7Z6K5 226 aa16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 MMP21Q8N119 569 aa16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 OR7G1Q8NGA0 311 aa16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 NUDT8Q8WV74 236 aa16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 GTF2H4Q92759 462 aa16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 CCDC115Q96NT0 180 aa16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 SPOCK3Q9BQ16 436 aa16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 TRIM8Q9BZR9 551 aa16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 BTNL2Q9UIR0 455 aa16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 PRPF19Q9UMS4 504 aaKnown RBP16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 NPFFR2Q9Y5X5 522 aa16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 A0A096LPI6 279 aa16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 PRSS51A0A1B0GVH4 220 aa16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 PDPK1O15530 556 aa16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 SCN2BO60939 215 aa16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 ERN1O75460 977 aaKnown RBP16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 RFPL3SP0C7P2 107 aa16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 SSTR2P30874 369 aa16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 FEN1P39748 380 aaKnown RBP16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 TRPC1P48995 793 aa16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 RPP38P78345 283 aaKnown RBP16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 C6orf10Q5SRN2 563 aa16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 LRIF1Q5T3J3 769 aa16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 B3GNT6Q6ZMB0 384 aa16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 MEX3BQ6ZN04 569 aaKnown RBP16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 CCDC71Q8IV32 467 aaPredicted RBP16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 SAMD14Q8IZD0 417 aaPredicted RBP16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 ARHGAP24Q8N264 748 aa16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 VWA5B2Q8N398 1253 aa16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 ZNF615Q8N8J6 731 aa16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 ZNF441Q8N8Z8 693 aa16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 LILRB4Q8NHJ6 448 aa16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 HOPXQ9BPY8 73 aaPredicted RBP16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 MMADHCQ9H3L0 296 aaPredicted RBP16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 ZNF703Q9H7S9 590 aaPredicted RBP16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 NEUROD4Q9HD90 331 aa16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 KCNJ16Q9NPI9 418 aa16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 SERHLQ9NQF3 203 aa16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 GIMAP4Q9NUV9 329 aa16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 BCAP29Q9UHQ4 241 aa16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 CNOT11Q9UKZ1 510 aaKnown RBP16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 CFL2Q9Y281 166 aa16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 ZNF780BQ9Y6R6 833 aa16.5■□□□□ 0.23
SQSTM1-204ENST00000453046 NKX2-6A6NCS4 301 aa16.49■□□□□ 0.23
SQSTM1-204ENST00000453046 WDR1O75083 606 aa16.49■□□□□ 0.23
SQSTM1-204ENST00000453046 CSNK2A2P19784 350 aaPredicted RBP16.49■□□□□ 0.23
SQSTM1-204ENST00000453046 GDF1P27539 372 aa16.49■□□□□ 0.23
SQSTM1-204ENST00000453046 NTSP30990 170 aa16.49■□□□□ 0.23
SQSTM1-204ENST00000453046 FRKP42685 505 aaPredicted RBP16.49■□□□□ 0.23
SQSTM1-204ENST00000453046 FBXW4P57775 412 aa16.49■□□□□ 0.23
SQSTM1-204ENST00000453046 DEFB107AQ8IZN7 70 aa16.49■□□□□ 0.23
SQSTM1-204ENST00000453046 ZNF295-AS1Q8N0V1 137 aa16.49■□□□□ 0.23
SQSTM1-204ENST00000453046 LRRC25Q8N386 305 aaPredicted RBP16.49■□□□□ 0.23
SQSTM1-204ENST00000453046 MCUR1Q96AQ8 359 aa16.49■□□□□ 0.23
SQSTM1-204ENST00000453046 LRRC58Q96CX6 371 aa16.49■□□□□ 0.23
SQSTM1-204ENST00000453046 ZBED6CLQ96FA7 236 aaPredicted RBP16.49■□□□□ 0.23
SQSTM1-204ENST00000453046 ZNF597Q96LX8 424 aa16.49■□□□□ 0.23
SQSTM1-204ENST00000453046 RAB3IPQ96QF0 476 aaPredicted RBP16.49■□□□□ 0.23
SQSTM1-204ENST00000453046 GPATCH1Q9BRR8 931 aaKnown RBP16.49■□□□□ 0.23
SQSTM1-204ENST00000453046 TTYH2Q9BSA4 534 aa16.49■□□□□ 0.23
SQSTM1-204ENST00000453046 UCK2Q9BZX2 261 aa16.49■□□□□ 0.23
SQSTM1-204ENST00000453046 PROK2Q9HC23 129 aa16.49■□□□□ 0.23
SQSTM1-204ENST00000453046 SPAG4Q9NPE6 437 aa16.49■□□□□ 0.23
SQSTM1-204ENST00000453046 SLC35C2Q9NQQ7 365 aa16.49■□□□□ 0.23
SQSTM1-204ENST00000453046 ACSS1Q9NUB1 689 aaPredicted RBP16.49■□□□□ 0.23
SQSTM1-204ENST00000453046 QPCTLQ9NXS2 382 aa16.49■□□□□ 0.23
SQSTM1-204ENST00000453046 UTS2RQ9UKP6 389 aa16.49■□□□□ 0.23
SQSTM1-204ENST00000453046 CES1P1Q9UKY3 287 aa16.49■□□□□ 0.23
SQSTM1-204ENST00000453046 TRBV5-3A0A0A0MS03 114 aa16.48■□□□□ 0.23
SQSTM1-204ENST00000453046 ANKRD33BA6NCL7 494 aa16.48■□□□□ 0.23
SQSTM1-204ENST00000453046 LRRC3CA6NJW4 275 aa16.48■□□□□ 0.23
SQSTM1-204ENST00000453046 RFXANKO14593 260 aa16.48■□□□□ 0.23
SQSTM1-204ENST00000453046 HOXB9P17482 250 aaPredicted RBP16.48■□□□□ 0.23
SQSTM1-204ENST00000453046 MASP1P48740 699 aa16.48■□□□□ 0.23
SQSTM1-204ENST00000453046 PSME3P61289 254 aa16.48■□□□□ 0.23
SQSTM1-204ENST00000453046 MLC1Q15049 377 aa16.48■□□□□ 0.23
SQSTM1-204ENST00000453046 PRICKLE4Q2TBC4 344 aa16.48■□□□□ 0.23
SQSTM1-204ENST00000453046 FAM111BQ6SJ93 734 aa16.48■□□□□ 0.23
SQSTM1-204ENST00000453046 DLEU7Q6UYE1 221 aa16.48■□□□□ 0.23
SQSTM1-204ENST00000453046 DNAJC14Q6Y2X3 702 aaPredicted RBP16.48■□□□□ 0.23
SQSTM1-204ENST00000453046 ANKRD46Q86W74 232 aa16.48■□□□□ 0.23
SQSTM1-204ENST00000453046 PRR22Q8IZ63 422 aa16.48■□□□□ 0.23
SQSTM1-204ENST00000453046 ZFP28Q8NHY6 868 aa16.48■□□□□ 0.23
SQSTM1-204ENST00000453046 ADIPOR1Q96A54 375 aa16.48■□□□□ 0.23
SQSTM1-204ENST00000453046 CIDECQ96AQ7 238 aaPredicted RBP16.48■□□□□ 0.23
SQSTM1-204ENST00000453046 EXOSC8Q96B26 276 aaKnown RBP16.48■□□□□ 0.23
SQSTM1-204ENST00000453046 LURAP1Q96LR2 239 aa16.48■□□□□ 0.23
SQSTM1-204ENST00000453046 PANX1Q96RD7 426 aa16.48■□□□□ 0.23
SQSTM1-204ENST00000453046 SECISBP2Q96T21 854 aaKnown RBP16.48■□□□□ 0.23
SQSTM1-204ENST00000453046 CGREF1Q99674 301 aa16.48■□□□□ 0.23
SQSTM1-204ENST00000453046 CADM1Q9BY67 442 aaKnown RBP16.48■□□□□ 0.23
SQSTM1-204ENST00000453046 ENKD1Q9H0I2 346 aa16.48■□□□□ 0.23
SQSTM1-204ENST00000453046 ACKR4Q9NPB9 350 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms