RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 PAIP2Q9BPZ3 127 aaKnown RBP16.29■□□□□ 0.2
CTNS-204ENST00000452111 TREX2Q9BQ50 279 aaPredicted RBP16.29■□□□□ 0.2
CTNS-204ENST00000452111 YIPF4Q9BSR8 244 aa16.29■□□□□ 0.2
CTNS-204ENST00000452111 RTN4RQ9BZR6 473 aa16.29■□□□□ 0.2
CTNS-204ENST00000452111 C20orf27Q9GZN8 174 aa16.29■□□□□ 0.2
CTNS-204ENST00000452111 DSN1Q9H410 356 aa16.29■□□□□ 0.2
CTNS-204ENST00000452111 SIRT3Q9NTG7 399 aaPredicted RBP16.29■□□□□ 0.2
CTNS-204ENST00000452111 FAM120CQ9NX05 1096 aaKnown RBP16.29■□□□□ 0.2
CTNS-204ENST00000452111 NTMQ9P121 344 aa16.29■□□□□ 0.2
CTNS-204ENST00000452111 EIF3LQ9Y262 564 aaKnown RBP16.29■□□□□ 0.2
CTNS-204ENST00000452111 SNX8Q9Y5X2 465 aa16.29■□□□□ 0.2
CTNS-204ENST00000452111 ACTL7BQ9Y614 415 aa16.29■□□□□ 0.2
CTNS-204ENST00000452111 LRBAP50851 2863 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 A0A1W2PRB8 838 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 NKX2-2O95096 273 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 G6PDP11413 515 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 BMP5P22003 454 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 SSTR2P30874 369 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 TIMP3P35625 211 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 SLC1A6P48664 564 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 STARP49675 285 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 CLK3P49761 638 aaKnown RBP16.28■□□□□ 0.2
CTNS-204ENST00000452111 GFRA1P56159 465 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 PRR5P85299 388 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 RCAN2Q14206 197 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 MLC1Q15049 377 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 DUSP5Q16690 384 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 CPTPQ5TA50 214 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 MFSD12Q6NUT3 480 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 AAGABQ6PD74 315 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 MARCH3Q86UD3 253 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 ANKRD42Q8N9B4 389 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 FADS6Q8N9I5 356 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 SLC16A11Q8NCK7 471 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 OR2M3Q8NG83 312 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 HOXB13Q92826 284 aaPredicted RBP16.28■□□□□ 0.2
CTNS-204ENST00000452111 C16orf58Q96GQ5 468 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 TBL1XR1Q9BZK7 514 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 ZCCHC3Q9NUD5 404 aaKnown RBP16.28■□□□□ 0.2
CTNS-204ENST00000452111 ATAD3AQ9NVI7 634 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 MED11Q9P086 117 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 RAP2CQ9Y3L5 183 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 MYO9AB2RTY4 2548 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 APCP25054 2843 aa16.28■□□□□ 0.2
CTNS-204ENST00000452111 MED12Q93074 2177 aa16.27■□□□□ 0.2
CTNS-204ENST00000452111 CSMD2Q7Z408 3487 aa16.27■□□□□ 0.2
CTNS-204ENST00000452111 CD8B2A6NJW9 211 aa16.27■□□□□ 0.2
CTNS-204ENST00000452111 GMFGO60234 142 aa16.27■□□□□ 0.2
CTNS-204ENST00000452111 ZIC3O60481 467 aa16.27■□□□□ 0.2
CTNS-204ENST00000452111 C6orf47O95873 294 aa16.27■□□□□ 0.2
CTNS-204ENST00000452111 IL2RAP01589 272 aa16.27■□□□□ 0.2
CTNS-204ENST00000452111 CPN1P15169 458 aa16.27■□□□□ 0.2
CTNS-204ENST00000452111 CEACAM8P31997 349 aaPredicted RBP16.27■□□□□ 0.2
CTNS-204ENST00000452111 MAP3K8P41279 467 aa16.27■□□□□ 0.2
CTNS-204ENST00000452111 DSCR4P56555 118 aaPredicted RBP16.27■□□□□ 0.2
CTNS-204ENST00000452111 TLE4Q04727 773 aa16.27■□□□□ 0.2
CTNS-204ENST00000452111 GRAMD1BQ3KR37 738 aa16.27■□□□□ 0.2
CTNS-204ENST00000452111 FIGNL1Q6PIW4 674 aa16.27■□□□□ 0.2
CTNS-204ENST00000452111 DMRTC2Q8IXT2 367 aaPredicted RBP16.27■□□□□ 0.2
CTNS-204ENST00000452111 RELL2Q8NC24 303 aaPredicted RBP16.27■□□□□ 0.2
CTNS-204ENST00000452111 DUSP19Q8WTR2 217 aa16.27■□□□□ 0.2
CTNS-204ENST00000452111 C14orf79Q96F83 325 aa16.27■□□□□ 0.2
CTNS-204ENST00000452111 CHMP6Q96FZ7 201 aa16.27■□□□□ 0.2
CTNS-204ENST00000452111 LURAP1Q96LR2 239 aa16.27■□□□□ 0.2
CTNS-204ENST00000452111 SORT1Q99523 831 aa16.27■□□□□ 0.2
CTNS-204ENST00000452111 TUBA1CQ9BQE3 449 aa16.27■□□□□ 0.2
CTNS-204ENST00000452111 SDHAF3Q9NRP4 125 aa16.27■□□□□ 0.2
CTNS-204ENST00000452111 NOP53Q9NZM5 478 aaKnown RBP16.27■□□□□ 0.2
CTNS-204ENST00000452111 FREM3P0C091 2139 aa16.27■□□□□ 0.19
CTNS-204ENST00000452111 DVL2O14641 736 aa16.26■□□□□ 0.19
CTNS-204ENST00000452111 ALOX5P09917 674 aa16.26■□□□□ 0.19
CTNS-204ENST00000452111 HK1P19367 917 aa16.26■□□□□ 0.19
CTNS-204ENST00000452111 PRPS1L1P21108 318 aa16.26■□□□□ 0.19
CTNS-204ENST00000452111 PRIM2P49643 509 aa16.26■□□□□ 0.19
CTNS-204ENST00000452111 LHX2P50458 406 aa16.26■□□□□ 0.19
CTNS-204ENST00000452111 RPL14P50914 215 aaKnown RBP16.26■□□□□ 0.19
CTNS-204ENST00000452111 ZNF136P52737 540 aa16.26■□□□□ 0.19
CTNS-204ENST00000452111 EMX2Q04743 252 aa16.26■□□□□ 0.19
CTNS-204ENST00000452111 MAD2L1Q13257 205 aaPredicted RBP16.26■□□□□ 0.19
CTNS-204ENST00000452111 STX3Q13277 289 aa16.26■□□□□ 0.19
CTNS-204ENST00000452111 LASP1Q14847 261 aaKnown RBP16.26■□□□□ 0.19
CTNS-204ENST00000452111 SPDYE7PQ495Y7 208 aa16.26■□□□□ 0.19
CTNS-204ENST00000452111 HHATQ5VTY9 493 aa16.26■□□□□ 0.19
CTNS-204ENST00000452111 RAET1LQ5VY80 246 aa16.26■□□□□ 0.19
CTNS-204ENST00000452111 PLXDC2Q6UX71 529 aa16.26■□□□□ 0.19
CTNS-204ENST00000452111 APOOLQ6UXV4 268 aa16.26■□□□□ 0.19
CTNS-204ENST00000452111 COX18Q8N8Q8 333 aa16.26■□□□□ 0.19
CTNS-204ENST00000452111 C9orf106Q8NAJ2 232 aa16.26■□□□□ 0.19
CTNS-204ENST00000452111 ZPLD1Q8TCW7 415 aa16.26■□□□□ 0.19
CTNS-204ENST00000452111 OR5P2Q8WZ92 322 aa16.26■□□□□ 0.19
CTNS-204ENST00000452111 PRPF18Q99633 342 aaKnown RBP16.26■□□□□ 0.19
CTNS-204ENST00000452111 CXorf36Q9H7Y0 433 aa16.26■□□□□ 0.19
CTNS-204ENST00000452111 AKTIPQ9H8T0 292 aa16.26■□□□□ 0.19
CTNS-204ENST00000452111 CALHM2Q9HA72 323 aa16.26■□□□□ 0.19
CTNS-204ENST00000452111 MRPS18CQ9Y3D5 142 aaKnown RBP16.26■□□□□ 0.19
CTNS-204ENST00000452111 DCHS2Q6V1P9 2916 aa16.25■□□□□ 0.19
CTNS-204ENST00000452111 MBD3L4A6NDZ8 208 aaPredicted RBP16.25■□□□□ 0.19
CTNS-204ENST00000452111 MBD3L3A6NE82 208 aaPredicted RBP16.25■□□□□ 0.19
CTNS-204ENST00000452111 MBD3L5A6NJ08 208 aaPredicted RBP16.25■□□□□ 0.19
CTNS-204ENST00000452111 CLCA1A8K7I4 914 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms