RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 TRBV4-1A0A0J9YWV2 114 aa13.21□□□□□ -0.29
USP39-207ENST00000450066 A8MUA0 341 aa13.21□□□□□ -0.29
USP39-207ENST00000450066 PEX12O00623 359 aa13.21□□□□□ -0.29
USP39-207ENST00000450066 UGT2B11O75310 529 aa13.21□□□□□ -0.29
USP39-207ENST00000450066 OXSR1O95747 527 aaPredicted RBP13.21□□□□□ -0.29
USP39-207ENST00000450066 ELAVL4P26378 380 aaKnown RBP13.21□□□□□ -0.29
USP39-207ENST00000450066 POLR2IP36954 125 aaKnown RBP13.21□□□□□ -0.29
USP39-207ENST00000450066 IL1RL1Q01638 556 aa13.21□□□□□ -0.29
USP39-207ENST00000450066 MC2RQ01718 297 aa13.21□□□□□ -0.29
USP39-207ENST00000450066 IL18R1Q13478 541 aa13.21□□□□□ -0.29
USP39-207ENST00000450066 FLYWCH1Q4VC44 716 aa13.21□□□□□ -0.29
USP39-207ENST00000450066 FGD3Q5JSP0 725 aa13.21□□□□□ -0.29
USP39-207ENST00000450066 RNF220Q5VTB9 566 aa13.21□□□□□ -0.29
USP39-207ENST00000450066 ZNF770Q6IQ21 691 aaPredicted RBP13.21□□□□□ -0.29
USP39-207ENST00000450066 C8orf59Q8N0T1 100 aaPredicted RBP13.21□□□□□ -0.29
USP39-207ENST00000450066 ZNF721Q8TF20 911 aa13.21□□□□□ -0.29
USP39-207ENST00000450066 RNF31Q96EP0 1072 aa13.21□□□□□ -0.29
USP39-207ENST00000450066 ART5Q96L15 291 aa13.21□□□□□ -0.29
USP39-207ENST00000450066 FUZQ9BT04 418 aa13.21□□□□□ -0.29
USP39-207ENST00000450066 OR8D2Q9GZM6 311 aa13.21□□□□□ -0.29
USP39-207ENST00000450066 RIBC2Q9H4K1 309 aa13.21□□□□□ -0.29
USP39-207ENST00000450066 FBXO8Q9NRD0 319 aa13.21□□□□□ -0.29
USP39-207ENST00000450066 PAPOLBQ9NRJ5 636 aaKnown RBP13.21□□□□□ -0.29
USP39-207ENST00000450066 RXFP3Q9NSD7 469 aa13.21□□□□□ -0.29
USP39-207ENST00000450066 MYRFQ9Y2G1 1151 aa13.21□□□□□ -0.29
USP39-207ENST00000450066 CLDN24A6NM45 220 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 PRR33A8MZF0 331 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 FAAHO00519 579 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 CPNE3O75131 537 aaKnown RBP13.2□□□□□ -0.3
USP39-207ENST00000450066 IGKV1D-16P01601 117 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 CBLP22681 906 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 CCKBRP32239 447 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 RPS6KA3P51812 740 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 RGS8P57771 180 aaPredicted RBP13.2□□□□□ -0.3
USP39-207ENST00000450066 DCST1Q5T197 706 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 TTC33Q6PID6 262 aaPredicted RBP13.2□□□□□ -0.3
USP39-207ENST00000450066 RBM44Q6ZP01 1051 aaKnown RBP13.2□□□□□ -0.3
USP39-207ENST00000450066 ZAR1Q86SH2 424 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 TSPYL5Q86VY4 417 aaPredicted RBP13.2□□□□□ -0.3
USP39-207ENST00000450066 NAXDQ8IW45 347 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 ZNF321PQ8N8H1 164 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 SUMF1Q8NBK3 374 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 OR9Q2Q8NGE9 314 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 SLC7A13Q8TCU3 470 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 CTRCQ99895 268 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 GABARAPL3Q9BY60 117 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 ARMC7Q9H6L4 198 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 ZNF556Q9HAH1 456 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 CBLCQ9ULV8 474 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 POFUT2Q9Y2G5 429 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 OR10H1Q9Y4A9 318 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 ZNF318Q5VUA4 2279 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 CDHR4A6H8M9 788 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 VSTM2BA6NLU5 285 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 H3BNH8 94 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 MEN1O00255 615 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 BCKDKO14874 412 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 FRS3O43559 492 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 TPST2O60704 377 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 CCNYL3P0C7X3 344 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 PPICP45877 212 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 NPRL3Q12980 569 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 KEAP1Q14145 624 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 ISLR2Q6UXK2 745 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 SHISA6Q6ZSJ9 500 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 THAP5Q7Z6K1 395 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 SLC26A1Q9H2B4 701 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 EVA1AQ9H8M9 152 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 MAN2C1Q9NTJ4 1040 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 WDFY3Q8IZQ1 3526 aa13.2□□□□□ -0.3
USP39-207ENST00000450066 NPIPA5A0A0B4J1W7 369 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 IDSB3KWA1 339 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 NPIPA7E9PJI5 369 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 AP3D1O14617 1153 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 GDF9O60383 454 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 CBFA2T3O75081 653 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 SEC24DO94855 1032 aaPredicted RBP13.19□□□□□ -0.3
USP39-207ENST00000450066 HEXBP07686 556 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 NPIPA8P0DM63 369 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 IFNA8P32881 189 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 RFX3P48380 749 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 SEC23BQ15437 767 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.19□□□□□ -0.3
USP39-207ENST00000450066 MRPL2Q5T653 305 aaKnown RBP13.19□□□□□ -0.3
USP39-207ENST00000450066 ZNF691Q5VV52 312 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 ZNF786Q8N393 782 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 PARP8Q8N3A8 854 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 LINC00471Q8N535 108 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 BCORP1Q8N888 145 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 ZSCAN1Q8NBB4 408 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 AQP11Q8NBQ7 271 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 MORN4Q8NDC4 146 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 NIPSNAP1Q9BPW8 284 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 EDEM2Q9BV94 578 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 TMEM9BQ9NQ34 198 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 PCDHGA10Q9Y5H3 936 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 RALGAPA1Q6GYQ0 2036 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 SH3PXD2BA1X283 911 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 E9PQ18 207 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 NPIPB9F8W1W9 429 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms