RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 CRB2Q5IJ48 1285 aa13.49□□□□□ -0.25
TNF-208ENST00000449264 ENPP6Q6UWR7 440 aa13.49□□□□□ -0.25
TNF-208ENST00000449264 RPS19BP1Q86WX3 136 aaKnown RBP13.49□□□□□ -0.25
TNF-208ENST00000449264 ARMC8Q8IUR7 673 aa13.49□□□□□ -0.25
TNF-208ENST00000449264 AQP12AQ8IXF9 295 aa13.49□□□□□ -0.25
TNF-208ENST00000449264 FAM86B1Q8N7N1 296 aa13.49□□□□□ -0.25
TNF-208ENST00000449264 OR5M3Q8NGP4 307 aa13.49□□□□□ -0.25
TNF-208ENST00000449264 DIO2Q92813 273 aa13.49□□□□□ -0.25
TNF-208ENST00000449264 GATA6Q92908 595 aa13.49□□□□□ -0.25
TNF-208ENST00000449264 ZG16BQ96DA0 208 aa13.49□□□□□ -0.25
TNF-208ENST00000449264 CDCP1Q9H5V8 836 aa13.49□□□□□ -0.25
TNF-208ENST00000449264 ATP13A2Q9NQ11 1180 aa13.49□□□□□ -0.25
TNF-208ENST00000449264 DCAF13Q9NV06 445 aaKnown RBP13.49□□□□□ -0.25
TNF-208ENST00000449264 ADPRHL2Q9NX46 363 aa13.49□□□□□ -0.25
TNF-208ENST00000449264 RPS6KA6Q9UK32 745 aa13.49□□□□□ -0.25
TNF-208ENST00000449264 SAMD4AQ9UPU9 718 aaKnown RBP13.49□□□□□ -0.25
TNF-208ENST00000449264 GPC6Q9Y625 555 aaPredicted RBP13.49□□□□□ -0.25
TNF-208ENST00000449264 DMXL2Q8TDJ6 3036 aa13.49□□□□□ -0.25
TNF-208ENST00000449264 CNTRLQ7Z7A1 2325 aa13.48□□□□□ -0.25
TNF-208ENST00000449264 SERPINB7O75635 380 aa13.48□□□□□ -0.25
TNF-208ENST00000449264 NADKO95544 446 aaPredicted RBP13.48□□□□□ -0.25
TNF-208ENST00000449264 IFNA14P01570 189 aa13.48□□□□□ -0.25
TNF-208ENST00000449264 ETS2P15036 469 aa13.48□□□□□ -0.25
TNF-208ENST00000449264 DCTP40126 519 aa13.48□□□□□ -0.25
TNF-208ENST00000449264 RRADP55042 308 aa13.48□□□□□ -0.25
TNF-208ENST00000449264 AP2B1P63010 937 aa13.48□□□□□ -0.25
TNF-208ENST00000449264 B3GNTL1Q67FW5 361 aaPredicted RBP13.48□□□□□ -0.25
TNF-208ENST00000449264 DESI1Q6ICB0 168 aa13.48□□□□□ -0.25
TNF-208ENST00000449264 VTCN1Q7Z7D3 282 aa13.48□□□□□ -0.25
TNF-208ENST00000449264 VRK2Q86Y07 508 aa13.48□□□□□ -0.25
TNF-208ENST00000449264 PEX5LQ8IYB4 626 aa13.48□□□□□ -0.25
TNF-208ENST00000449264 FAM110BQ8TC76 370 aa13.48□□□□□ -0.25
TNF-208ENST00000449264 SPPL2AQ8TCT8 520 aa13.48□□□□□ -0.25
TNF-208ENST00000449264 STMN2Q93045 179 aa13.48□□□□□ -0.25
TNF-208ENST00000449264 HSH2DQ96JZ2 352 aa13.48□□□□□ -0.25
TNF-208ENST00000449264 RASL10BQ96S79 203 aa13.48□□□□□ -0.25
TNF-208ENST00000449264 SEPHS2Q99611 448 aa13.48□□□□□ -0.25
TNF-208ENST00000449264 SPATA5L1Q9BVQ7 753 aa13.48□□□□□ -0.25
TNF-208ENST00000449264 ZBTB20Q9HC78 741 aaPredicted RBP13.48□□□□□ -0.25
TNF-208ENST00000449264 POLE3Q9NRF9 147 aa13.48□□□□□ -0.25
TNF-208ENST00000449264 FLRT3Q9NZU0 649 aa13.48□□□□□ -0.25
TNF-208ENST00000449264 DKK4Q9UBT3 224 aa13.48□□□□□ -0.25
TNF-208ENST00000449264 AURKCQ9UQB9 309 aa13.48□□□□□ -0.25
TNF-208ENST00000449264 POLHQ9Y253 713 aa13.48□□□□□ -0.25
TNF-208ENST00000449264 NPFFR2Q9Y5X5 522 aa13.48□□□□□ -0.25
TNF-208ENST00000449264 TCRBV3S1A0A5B6 114 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 DHRS12A0PJE2 317 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 EFSO43281 561 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 SUV39H1O43463 412 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 HS6ST1O60243 411 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 TSPAN2O60636 221 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 PPM1BO75688 479 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 PRKD3O94806 890 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 C8BP07358 591 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 PSMA4P25789 261 aaKnown RBP13.47□□□□□ -0.25
TNF-208ENST00000449264 FBXW4P57775 412 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 PSPHP78330 225 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 RAPSNQ13702 412 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 MAPK14Q16539 360 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 ZNF311Q5JNZ3 666 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 IRAK1BP1Q5VVH5 260 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 CBLL1Q75N03 491 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 SPACA3Q8IXA5 215 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 EID3Q8N140 333 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 TMEM102Q8N9M5 508 aaPredicted RBP13.47□□□□□ -0.25
TNF-208ENST00000449264 OR52P1PQ8NH57 321 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 PYDC1Q8WXC3 89 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 RNF145Q96MT1 663 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 SAP130Q9H0E3 1048 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 TRIM45Q9H8W5 580 aaPredicted RBP13.47□□□□□ -0.25
TNF-208ENST00000449264 MTHFD2LQ9H903 347 aaPredicted RBP13.47□□□□□ -0.25
TNF-208ENST00000449264 LOC400499M0QZD8 3231 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 CPAMD8Q8IZJ3 1885 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 A6NL46 340 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 ICOSLGO75144 302 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 UGT2B11O75310 529 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 UGT2B17O75795 530 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 MFN2O95140 757 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 UTS2O95399 124 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 PABPC4LP0CB38 370 aaKnown RBP13.47□□□□□ -0.25
TNF-208ENST00000449264 CYP4B1P13584 511 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 IL7RP16871 459 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 SOX3P41225 446 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 TMED10P49755 219 aaKnown RBP13.47□□□□□ -0.25
TNF-208ENST00000449264 SSR4P51571 173 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 MLF1P58340 268 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 RHDQ02161 417 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 DEFB109BQ30KR1 87 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 GRAMD1BQ3KR37 738 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 PDZK1Q5T2W1 519 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 JMJD6Q6NYC1 403 aaPredicted RBP13.47□□□□□ -0.25
TNF-208ENST00000449264 FKBP9P1Q75LS8 142 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 EIF3MQ7L2H7 374 aaKnown RBP13.47□□□□□ -0.25
TNF-208ENST00000449264 GALNT16Q8N428 558 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 OR52E4Q8NGH9 312 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 CANT1Q8WVQ1 401 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 ASB15Q8WXK1 588 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 LZICQ8WZA0 190 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 SLC47A1Q96FL8 570 aa13.47□□□□□ -0.25
TNF-208ENST00000449264 LHPPQ9H008 270 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms